Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB01g03351 Brassica carinata HOM05D004821 ORTHO05D005711 2.6e-181 638.6 332 100.0
C03p29340 Brassica napus HOM05D004821 ORTHO05D005711 4.5e-178 627.9 332 98.2
A03p24610 Brassica napus HOM05D004821 ORTHO05D005711 9.5e-176 620.2 333 96.4
BraA03t11666Z Brassica rapa HOM05D004821 ORTHO05D005711 8.0e-175 617.1 333 95.8
BolC3t15281H Brassica oleracea HOM05D004821 ORTHO05D005711 2.4e-171 605.5 346 91.6
Thhalv10001539m.g Eutrema salsugineum HOM05D004821 ORTHO05D005711 2.5e-160 568.9 341 87.1
Sp4g26050 Schrenkiella parvula HOM05D004821 ORTHO05D005711 8.1e-159 563.9 345 84.3
AT2G43950 Arabidopsis thaliana HOM05D004821 ORTHO05D005711 7.8e-154 547.4 330 83.9
Carub.0004s2652 Capsella rubella HOM05D004821 ORTHO05D005711 1.0e-153 547.0 340 83.5
AL4G42830 Arabidopsis lyrata HOM05D004821 ORTHO05D005711 5.1e-153 544.7 348 81.0
C04p70840 Brassica napus HOM05D004821 ORTHO05D005711 2.1e-151 539.3 306 88.2
CARHR139130 Cardamine hirsuta HOM05D004821 ORTHO05D005711 5.2e-150 534.6 345 80.9
BraA04t18773Z Brassica rapa HOM05D004821 ORTHO05D005711 6.8e-150 534.3 345 81.7
A04p33140 Brassica napus HOM05D004821 ORTHO05D005711 1.5e-149 533.1 343 82.5
BcaB06g29351 Brassica carinata HOM05D004821 ORTHO05D005711 7.6e-149 530.8 342 82.5
Aa31LG1G25650 Aethionema arabicum HOM05D004821 ORTHO05D005711 1.3e-148 530.0 303 85.1
BcaB06g29509 Brassica carinata HOM05D004821 ORTHO05D005711 4.3e-144 515.0 302 85.4
THA.LOC104802343 Tarenaya hassleriana HOM05D004821 ORTHO05D005711 1.5e-136 490.0 333 75.4
THA.LOC104804303 Tarenaya hassleriana HOM05D004821 ORTHO05D005711 6.9e-134 481.1 345 74.2
Cpa.g.sc151.7 Carica papaya HOM05D004821 ORTHO05D005711 3.7e-127 458.8 328 72.9
Ciclev10021021m.g Citrus clementina HOM05D004821 ORTHO05D005711 5.1e-121 438.3 295 71.9
Atru.chr3.1996 Acer truncatum HOM05D004821 ORTHO05D005711 8.7e-121 437.6 295 72.2
PGR042G3220 Punica granatum HOM05D004821 ORTHO05D005711 3.3e-120 435.6 343 66.5
Thecc.03G204200 Theobroma cacao HOM05D004821 ORTHO05D005711 7.4e-120 434.5 293 72.0
Haze_11130 Corylus avellana HOM05D004821 ORTHO05D005711 1.6e-119 433.3 301 70.1
Cfa008514 Carpinus fangiana HOM05D004821 ORTHO05D005711 2.8e-119 432.6 301 70.1
Potri.007G144900 Populus trichocarpa HOM05D004821 ORTHO05D005711 1.1e-118 430.6 294 71.4
arahy.Tifrunner.gnm1.ann1.PJYW2S Arachis hypogaea HOM05D004821 ORTHO05D005711 3.1e-118 429.1 333 65.2
arahy.Tifrunner.gnm1.ann1.TNA3AF Arachis hypogaea HOM05D004821 ORTHO05D005711 3.1e-118 429.1 333 65.2
COL.COLO4_16819 Corchorus olitorius HOM05D004821 ORTHO05D005711 3.1e-118 429.1 341 67.2
TPR.G5989 Trifolium pratense HOM05D004821 ORTHO05D005711 4.0e-118 428.7 317 65.9
QL10p064358 Quercus lobata HOM05D004821 ORTHO05D005711 6.9e-118 427.9 294 70.7
Sabra07G0115900 Salix brachista HOM05D004821 ORTHO05D005711 1.5e-117 426.8 294 70.4
Gohir.A11G015800 Gossypium hirsutum HOM05D004821 ORTHO05D005711 2.0e-117 426.4 294 71.1
VMungo1215G0856 Vigna mungo HOM05D004821 ORTHO05D005711 3.4e-117 425.6 294 70.1
Gorai.007G016400 Gossypium raimondii HOM05D004821 ORTHO05D005711 5.8e-117 424.9 294 70.1
Prupe.7G269800 Prunus persica HOM05D004821 ORTHO05D005711 5.8e-117 424.9 294 69.4
CiPaw.01G201700 Carya illinoinensis HOM05D004821 ORTHO05D005711 1.0e-116 424.1 301 69.1
Manes.01G010100 Manihot esculenta HOM05D004821 ORTHO05D005711 1.3e-116 423.7 293 70.0
Nn1g09422 Nelumbo nucifera HOM05D004821 ORTHO05D005711 1.7e-116 423.3 329 66.9
Oeu033086.1 Olea europaea HOM05D004821 ORTHO05D005711 1.7e-116 423.3 294 71.1
SGA_v2.0_scaffold12G06219 Striga asiatica HOM05D004821 ORTHO05D005711 1.7e-116 423.3 295 70.8
Duzib205G0343 Durio zibethinus HOM05D004821 ORTHO05D005711 1.9e-115 419.9 315 66.3
Cc03_g15980 Coffea canephora HOM05D004821 ORTHO05D005711 4.2e-115 418.7 294 69.7
CiPaw.02G124700 Carya illinoinensis HOM05D004821 ORTHO05D005711 5.5e-115 418.3 334 65.0
Actinidia18397 Actinidia chinensis HOM05D004821 ORTHO05D005711 7.1e-115 417.9 294 70.4
Lj4g0002865 Lotus japonicus HOM05D004821 ORTHO05D005711 2.7e-114 416.0 333 63.1
RcHm_v2.0_Chr2g0084461 Rosa chinensis HOM05D004821 ORTHO05D005711 2.7e-114 416.0 296 67.9
Sabra17G0008100 Salix brachista HOM05D004821 ORTHO05D005711 2.7e-114 416.0 294 70.1
Solyc04g008520.3 Solanum lycopersicum HOM05D004821 ORTHO05D005711 2.7e-114 416.0 330 63.6
CANSAT56G1350 Cannabis sativa HOM05D004821 ORTHO05D005711 4.6e-114 415.2 295 67.5
Hund22594 Selenicereus undatus HOM05D004821 ORTHO05D005711 6.0e-114 414.8 294 69.0
MD15G1143200 Malus domestica HOM05D004821 ORTHO05D005711 7.9e-114 414.5 294 68.4
Peaxi162Scf00329g00933 Petunia axillaris HOM05D004821 ORTHO05D005711 1.3e-113 413.7 294 68.7
Phvul.003G074500 Phaseolus vulgaris HOM05D004821 ORTHO05D005711 1.3e-113 413.7 328 64.0
PSO675G6376 Papaver somniferum HOM05D004821 ORTHO05D005711 1.8e-113 413.3 341 62.5
Eucgr.A00428 Eucalyptus grandis HOM05D004821 ORTHO05D005711 2.3e-113 412.9 294 70.4
Ca_13543_v3 Cicer arietinum L. HOM05D004821 ORTHO05D005711 3.9e-113 412.1 297 67.3
Sopen04g003670 Solanum pennellii HOM05D004821 ORTHO05D005711 5.1e-113 411.8 295 68.5
Hma1.2p1_0872F.1_g231140 Hydrangea macrophylla HOM05D004821 ORTHO05D005711 8.7e-113 411.0 302 67.2
Lj6A619G67 Lonicera japonica HOM05D004821 ORTHO05D005711 1.1e-112 410.6 294 69.4
MSTRG.4551 Avicennia marina HOM05D004821 ORTHO05D005711 1.5e-112 410.2 296 68.2
Psat4g001240 Pisum sativum HOM05D004821 ORTHO05D005711 1.5e-112 410.2 295 66.4
Eucgr.A00426 Eucalyptus grandis HOM05D004821 ORTHO05D005711 2.5e-112 409.5 294 70.4
Sed0001216 Sechium edule HOM05D004821 ORTHO05D005711 2.5e-112 409.5 330 64.5
CsaV3_6G037260 Cucumis sativus L. HOM05D004821 ORTHO05D005711 3.3e-112 409.1 326 63.8
Potri.017G007300 Populus trichocarpa HOM05D004821 ORTHO05D005711 1.6e-111 406.8 330 63.6
FvH4_1g00191 Fragaria vesca HOM05D004821 ORTHO05D005711 2.2e-111 406.4 296 65.9
MD00G1087400 Malus domestica HOM05D004821 ORTHO05D005711 2.2e-111 406.4 294 67.3
BcaC02g07141 Brassica carinata HOM05D004821 ORTHO05D005711 2.8e-111 406.0 305 72.8
Glyma.17G000700 Glycine max HOM05D004821 ORTHO05D005711 2.8e-111 406.0 295 66.4
PGSC0003DMG400029438 Solanum tuberosum HOM05D004821 ORTHO05D005711 3.7e-111 405.6 302 66.2
Aqoxy5G00034 Aquilegia oxysepala HOM05D004821 ORTHO05D005711 1.8e-110 403.3 294 67.7
Nitab4.5_0006607g0020 Nicotiana tabacum HOM05D004821 ORTHO05D005711 1.8e-110 403.3 295 66.8
ClCG09G014480 Citrullus lanatus HOM05D004821 ORTHO05D005711 4.1e-110 402.1 326 61.3
Medtr4g134950 Medicago truncatula HOM05D004821 ORTHO05D005711 5.3e-110 401.7 331 62.2
PSO732G0644 Papaver somniferum HOM05D004821 ORTHO05D005711 5.3e-110 401.7 288 69.1
Nitab4.5_0000129g0470 Nicotiana tabacum HOM05D004821 ORTHO05D005711 9.0e-110 401.0 295 66.8
MBI10_g16333_MAGBIO Magnolia biondii HOM05D004821 ORTHO05D005711 3.4e-109 399.1 293 68.3
Lsat_1_v5_gn_7_44620 Lactuca sativa HOM05D004821 ORTHO05D005711 7.6e-109 397.9 329 62.3
FAN26G2560 Fragaria x ananassa HOM05D004821 ORTHO05D005711 1.3e-108 397.1 296 64.9
FAN26G2598 Fragaria x ananassa HOM05D004821 ORTHO05D005711 1.3e-108 397.1 296 64.9
Thecc.05G001800 Theobroma cacao HOM05D004821 ORTHO05D005711 1.7e-108 396.7 338 60.9
Gohir.D11G015800 Gossypium hirsutum HOM05D004821 ORTHO05D005711 5.0e-108 395.2 294 67.0
Ah.13g073170 Amaranthus hybridus HOM05D004821 ORTHO05D005711 1.9e-107 393.3 299 63.9
CSS0009446 Camellia sinensis var. sinensis HOM05D004821 ORTHO05D005711 5.5e-107 391.7 330 62.4
CSS0027099 Camellia sinensis var. sinensis HOM05D004821 ORTHO05D005711 5.5e-107 391.7 330 62.4
Gohir.A12G247900 Gossypium hirsutum HOM05D004821 ORTHO05D005711 5.5e-107 391.7 293 64.2
Gorai.008G266600 Gossypium raimondii HOM05D004821 ORTHO05D005711 5.5e-107 391.7 293 64.2
EL10Ac3g06166 Beta vulgaris HOM05D004821 ORTHO05D005711 1.2e-106 390.6 328 60.4
Rhsim09G0003600 Rhododendron simsii HOM05D004821 ORTHO05D005711 2.1e-106 389.8 294 65.3
SalBow3G1744 Salvia bowleyana HOM05D004821 ORTHO05D005711 2.7e-106 389.4 334 59.3
Gohir.D12G248600 Gossypium hirsutum HOM05D004821 ORTHO05D005711 4.6e-106 388.7 293 63.5
Migut.N03030 Erythranthe guttata HOM05D004821 ORTHO05D005711 2.3e-105 386.3 302 65.2
Actinidia11430 Actinidia chinensis HOM05D004821 ORTHO05D005711 3.0e-105 386.0 294 64.6
GSVIVG01038250001 Vitis vinifera HOM05D004821 ORTHO05D005711 1.1e-104 384.0 331 60.1
DCAR_029913 Daucus carota HOM05D004821 ORTHO05D005711 7.4e-104 381.3 294 63.9
Migut.G00920 Erythranthe guttata HOM05D004821 ORTHO05D005711 7.4e-104 381.3 335 59.1
Lalb_Chr13g0304481 Lupinus albus HOM05D004821 ORTHO05D005711 7.4e-104 381.3 299 60.9
AUR62002483 Chenopodium quinoa HOM05D004821 ORTHO05D005711 4.1e-102 375.6 345 55.4
Gohir.D08G113600 Gossypium hirsutum HOM05D004821 ORTHO05D005711 1.7e-100 370.2 288 62.8
Gohir.A08G102400 Gossypium hirsutum HOM05D004821 ORTHO05D005711 2.9e-100 369.4 288 62.8
CDE02G4358 Ceratophyllum demersum HOM05D004821 ORTHO05D005711 3.2e-99 365.9 297 62.0
AUR62023709 Chenopodium quinoa HOM05D004821 ORTHO05D005711 4.2e-99 365.5 294 61.6
Gorai.004G122500 Gossypium raimondii HOM05D004821 ORTHO05D005711 4.2e-99 365.5 288 62.5
CAN.G458.7 Capsicum annuum HOM05D004821 ORTHO05D005711 5.5e-99 365.2 269 66.9
vmacro00722 Vaccinium macrocarpon HOM05D004821 ORTHO05D005711 3.3e-96 355.9 328 57.3
HPP92_004517 Vanilla planifolia HOM05D004821 ORTHO05D005711 8.2e-95 351.3 338 53.6
MELO3C014389.2 Cucumis melo HOM05D004821 ORTHO05D005711 5.3e-94 348.6 266 63.5
HanXRQChr03g0094031 Helianthus annuus HOM05D004821 ORTHO05D005711 2.0e-93 346.7 299 60.2
unitig_37.g12004 Utricularia gibba HOM05D004821 ORTHO05D005711 1.3e-92 344.0 296 58.8
Eucgr.L00828 Eucalyptus grandis HOM05D004821 ORTHO05D005711 2.9e-92 342.8 294 60.5
Duzib084G0132 Durio zibethinus HOM05D004821 ORTHO05D005711 1.1e-88 330.9 292 57.9
ATR0743G163 Amborella trichopoda HOM05D004821 ORTHO05D005711 5.7e-88 328.6 289 57.1
TAR362G0479 Trochodendron aralioides HOM05D004821 ORTHO05D005711 5.7e-88 328.6 336 53.6
ECA232G4673 Erigeron canadensis HOM05D004821 ORTHO05D005711 1.1e-83 314.3 269 59.1
Os02g0608900 Oryza sativa ssp. japonica HOM05D004821 ORTHO05D005711 2.7e-82 309.7 307 53.1
Hund12277 Selenicereus undatus HOM05D004821 ORTHO05D005711 2.7e-77 293.1 249 59.0
HPP92_004526 Vanilla planifolia HOM05D004821 ORTHO05D005711 3.6e-74 282.7 312 49.4
Eucgr.D01249 Eucalyptus grandis HOM05D004821 ORTHO05D005711 3.4e-72 276.2 199 69.8
Zm00001eb133840 Zea mays HOM05D004821 ORTHO05D005711 1.4e-70 270.8 380 41.8
Dinv24752 Davidia involucrata HOM05D004821 ORTHO05D005711 2.3e-68 263.5 254 58.7
Pp3c26_11540 Physcomitrium patens HOM05D004821 ORTHO05D005711 9.5e-67 258.1 290 44.1
Eucgr.D01533 Eucalyptus grandis HOM05D004821 ORTHO05D005711 1.2e-64 251.1 201 65.7
Mapoly0065s0080 Marchantia polymorpha HOM05D004821 ORTHO05D005711 4.4e-64 249.2 295 45.8
Pp3c3_3220 Physcomitrium patens HOM05D004821 ORTHO05D005711 1.7e-63 247.3 290 43.4
SMO119G0235 Selaginella moellendorffii HOM05D004821 ORTHO05D005711 1.0e-60 238.0 291 40.9
Sc25g0003030 Simmondsia chinensis HOM05D004821 ORTHO05D005711 5.2e-57 225.7 312 43.3
Ah.07g203210 Amaranthus hybridus HOM05D004821 ORTHO05D005711 1.5e-56 224.2 162 66.0
AagrBONN_evm.TU.Sc2ySwM_362.2829 Anthoceros agrestis HOM05D004821 ORTHO05D005711 2.4e-54 216.9 259 42.9
RcHm_v2.0_Chr7g0203201 Rosa chinensis HOM05D004821 ORTHO05D005711 4.9e-47 192.6 174 55.2
BolC7t45177H Brassica oleracea HOM05D004821 ORTHO05D005711 1.9e-46 190.7 139 75.5
C07p46620 Brassica napus HOM05D004821 ORTHO05D005711 4.1e-46 189.5 137 75.9
Zm00001eb246750 Zea mays HOM05D004821 ORTHO05D005711 4.6e-45 186.0 225 48.4
BcaB01g03349 Brassica carinata HOM05D004821 ORTHO05D005711 4.7e-42 176.0 124 78.2
QL10p064343 Quercus lobata HOM05D004821 ORTHO05D005711 1.5e-35 154.5 84 82.1
CBR_g30320 Chara braunii HOM05D004821 ORTHO05D005711 4.3e-35 152.9 282 33.3
BcaB04g18803 Brassica carinata HOM05D004821 ORTHO05D005711 2.4e-33 147.1 73 93.2
CARHR257120 Cardamine hirsuta HOM05D004821 ORTHO05D005711 4.4e-32 142.9 87 78.2
BcaC05g24570 Brassica carinata HOM05D000813 ORTHO05D004282 1.1e-30 138.3 76 85.5
Oeu053428.1 Olea europaea HOM05D004821 ORTHO05D005711 3.5e-29 133.3 114 62.3
FAN07G0128 Fragaria x ananassa HOM05D004821 ORTHO05D005711 6.0e-29 132.5 116 53.4
MD09G1202400 Malus domestica HOM05D004821 ORTHO05D005711 6.2e-26 122.5 102 59.8
Actinidia34565 Actinidia chinensis HOM05D004821 ORTHO05D005711 1.1e-25 121.7 68 80.9
BcaC07g42475 Brassica carinata HOM05D004821 ORTHO05D005711 7.1e-22 109.0 58 91.4
CDE09G1042 Ceratophyllum demersum HOM05D001480 ORTHO05D001331 3.5e-21 106.7 90 56.7
Ah.07g203220 Amaranthus hybridus HOM05D004821 ORTHO05D005711 2.3e-20 104.0 122 45.1
BcaB02g11099 Brassica carinata HOM05D004821 ORTHO05D005711 1.9e-19 100.9 62 75.8
BcaC06g33352 Brassica carinata HOM05D004821 ORTHO05D005711 2.5e-19 100.5 92 65.2
Migut.G00919 Erythranthe guttata HOM05D004821 ORTHO05D005711 2.0e-16 90.9 121 42.1
CDE09G1416 Ceratophyllum demersum HOM05D004821 ORTHO05D005711 5.8e-16 89.4 177 35.0
unitig_92.g28210 Utricularia gibba HOM05D003449 ORTHO05D004133 1.9e-11 74.3 47 70.2
TAR362G0528 Trochodendron aralioides HOM05D004821 ORTHO05D005711 2.4e-09 67.4 84 45.2
Actinidia39253 Actinidia chinensis HOM05D004821 ORTHO05D005711 8.4e-07 58.9 60 50.0


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