Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB01g03097 Brassica carinata HOM05D003550 ORTHO05D004336 3.7e-76 288.1 144 100.0
A03p06030 Brassica napus HOM05D003550 ORTHO05D004336 2.7e-42 175.6 130 66.9
BraA03t09941Z Brassica rapa HOM05D003550 ORTHO05D004336 2.7e-42 175.6 130 66.9
BcaB01g05352 Brassica carinata HOM05D003550 ORTHO05D004336 1.0e-41 173.7 130 66.2
C03p07080 Brassica napus HOM05D003550 ORTHO05D004336 1.0e-41 173.7 130 66.2
BolC3t13205H Brassica oleracea HOM05D003550 ORTHO05D004336 1.0e-41 173.7 130 66.2
Carub.0006s1169 Capsella rubella HOM05D003550 ORTHO05D004336 1.7e-41 172.9 130 66.2
Sp6g30490 Schrenkiella parvula HOM05D003550 ORTHO05D004336 1.7e-41 172.9 130 65.4
AL6G24150 Arabidopsis lyrata HOM05D003550 ORTHO05D004336 3.9e-41 171.8 130 64.6
AT5G13530 Arabidopsis thaliana HOM05D003550 ORTHO05D004336 3.9e-41 171.8 130 64.6
Thhalv10012422m.g Eutrema salsugineum HOM05D003550 ORTHO05D004336 6.6e-41 171.0 130 64.6
THA.LOC104819140 Tarenaya hassleriana HOM05D003550 ORTHO05D004336 3.3e-40 168.7 130 63.8
Cpa.g.sc169.51 Carica papaya HOM05D003550 ORTHO05D004336 1.6e-39 166.4 130 61.5
Aa31LG11G7760 Aethionema arabicum HOM05D003550 ORTHO05D004336 2.8e-39 165.6 130 63.1
CARHR199910 Cardamine hirsuta HOM05D003550 ORTHO05D004336 3.6e-39 165.2 135 61.5
Ciclev10000023m.g Citrus clementina HOM05D003550 ORTHO05D004336 2.3e-38 162.5 130 59.2
Potri.001G029600 Populus trichocarpa HOM05D003550 ORTHO05D004336 2.3e-38 162.5 130 58.5
Lalb_Chr01g0015821 Lupinus albus HOM05D003550 ORTHO05D004336 4.0e-38 161.8 130 59.2
Nn7g36747 Nelumbo nucifera HOM05D003550 ORTHO05D004336 4.0e-38 161.8 130 59.2
arahy.Tifrunner.gnm1.ann1.VF4M4N Arachis hypogaea HOM05D003550 ORTHO05D004336 8.9e-38 160.6 130 59.2
Atru.chr12.1267 Acer truncatum HOM05D003550 ORTHO05D004336 1.2e-37 160.2 130 57.7
arahy.Tifrunner.gnm1.ann1.LJ5CCV Arachis hypogaea HOM05D003550 ORTHO05D004336 1.2e-37 160.2 130 58.5
CiPaw.14G008600 Carya illinoinensis HOM05D003550 ORTHO05D004336 1.5e-37 159.8 130 58.5
Dinv32016 Davidia involucrata HOM05D003550 ORTHO05D004336 1.5e-37 159.8 130 58.5
Sabra01G0021200 Salix brachista HOM05D003550 ORTHO05D004336 1.5e-37 159.8 130 58.5
GSVIVG01036651001 Vitis vinifera HOM05D003550 ORTHO05D004336 2.0e-37 159.5 130 57.7
EL10Ac2g02773 Beta vulgaris HOM05D003550 ORTHO05D004336 2.6e-37 159.1 130 57.7
Haze_03007 Corylus avellana HOM05D003550 ORTHO05D004336 3.4e-37 158.7 130 57.7
Duzib106G1351 Durio zibethinus HOM05D003550 ORTHO05D004336 3.4e-37 158.7 130 56.9
Lj3g0007376 Lotus japonicus HOM05D003550 ORTHO05D004336 3.4e-37 158.7 130 57.7
TAR369G1080 Trochodendron aralioides HOM05D003550 ORTHO05D004336 3.4e-37 158.7 130 57.7
Glyma.11G157400 Glycine max HOM05D003550 ORTHO05D004336 4.4e-37 158.3 130 57.7
PSO339G1124 Papaver somniferum HOM05D003550 ORTHO05D004336 4.4e-37 158.3 130 57.7
CSS0018240 Camellia sinensis var. sinensis HOM05D003550 ORTHO05D004336 5.8e-37 157.9 130 56.9
CSS0021926 Camellia sinensis var. sinensis HOM05D003550 ORTHO05D004336 5.8e-37 157.9 130 56.9
Dinv44694 Davidia involucrata HOM05D003550 ORTHO05D004336 5.8e-37 157.9 130 57.7
Duzib114G0877 Durio zibethinus HOM05D003550 ORTHO05D004336 5.8e-37 157.9 130 55.4
Gohir.A10G186900 Gossypium hirsutum HOM05D003550 ORTHO05D004336 5.8e-37 157.9 130 56.2
Gohir.D10G193900 Gossypium hirsutum HOM05D003550 ORTHO05D004336 5.8e-37 157.9 130 56.2
Gorai.011G216900 Gossypium raimondii HOM05D003550 ORTHO05D004336 5.8e-37 157.9 130 56.2
Lsat_1_v5_gn_7_31581 Lactuca sativa HOM05D003550 ORTHO05D004336 7.5e-37 157.5 130 57.7
QL04p017759 Quercus lobata HOM05D003550 ORTHO05D004336 7.5e-37 157.5 130 57.7
MELO3C012481.2 Cucumis melo HOM05D003550 ORTHO05D004336 9.9e-37 157.1 130 56.9
CsaV3_5G036850 Cucumis sativus L. HOM05D003550 ORTHO05D004336 9.9e-37 157.1 130 56.9
ECA236G1978 Erigeron canadensis HOM05D003550 ORTHO05D004336 9.9e-37 157.1 130 57.7
HanXRQChr04g0112901 Helianthus annuus HOM05D003550 ORTHO05D004336 9.9e-37 157.1 130 58.5
Sed0009251 Sechium edule HOM05D003550 ORTHO05D004336 9.9e-37 157.1 130 56.9
Thecc.10G149700 Theobroma cacao HOM05D003550 ORTHO05D004336 9.9e-37 157.1 130 55.4
Cc00_g09560 Coffea canephora HOM05D003550 ORTHO05D004336 1.7e-36 156.4 130 56.9
Manes.04G157700 Manihot esculenta HOM05D003550 ORTHO05D004336 1.7e-36 156.4 130 56.9
Psat5g221640 Pisum sativum HOM05D003550 ORTHO05D004336 1.7e-36 156.4 130 56.2
SEGI_17265 Sequoiadendron giganteum HOM05D003550 ORTHO05D004336 1.7e-36 156.4 130 58.5
ATR0782G088 Amborella trichopoda HOM05D003550 ORTHO05D004336 2.2e-36 156.0 130 57.7
Eucgr.G03219 Eucalyptus grandis HOM05D003550 ORTHO05D004336 2.2e-36 156.0 130 58.5
PSO384G0047 Papaver somniferum HOM05D003550 ORTHO05D004336 2.2e-36 156.0 130 56.9
Ah.10g030140 Amaranthus hybridus HOM05D003550 ORTHO05D004336 2.9e-36 155.6 130 55.4
AUR62026885 Chenopodium quinoa HOM05D003550 ORTHO05D004336 2.9e-36 155.6 131 55.0
AUR62032634 Chenopodium quinoa HOM05D003550 ORTHO05D004336 2.9e-36 155.6 131 55.0
MD07G1048200 Malus domestica HOM05D003550 ORTHO05D004336 2.9e-36 155.6 130 57.7
Hund13381 Selenicereus undatus HOM05D003550 ORTHO05D004336 2.9e-36 155.6 130 56.2
Aqoxy1G00373 Aquilegia oxysepala HOM05D003550 ORTHO05D004336 3.7e-36 155.2 130 56.9
MSTRG.28033 Avicennia marina HOM05D003550 ORTHO05D004336 3.7e-36 155.2 131 58.0
Cfa010939 Carpinus fangiana HOM05D003550 ORTHO05D004336 3.7e-36 155.2 129 56.6
Mapoly0002s0111 Marchantia polymorpha HOM05D003550 ORTHO05D004336 4.9e-36 154.8 131 53.4
TPR.G1404 Trifolium pratense HOM05D003550 ORTHO05D004336 4.9e-36 154.8 130 56.9
TAR623G1672 Trochodendron aralioides HOM05D003550 ORTHO05D004336 4.9e-36 154.8 130 56.9
AagrBONN_evm.TU.Sc2ySwM_344.1602 Anthoceros agrestis HOM05D003550 ORTHO05D004336 6.4e-36 154.5 131 53.4
Nitab4.5_0005808g0030 Nicotiana tabacum HOM05D003550 ORTHO05D004336 6.4e-36 154.5 130 53.8
Phvul.005G025000 Phaseolus vulgaris HOM05D003550 ORTHO05D004336 6.4e-36 154.5 130 56.2
CDE02G1072 Ceratophyllum demersum HOM05D003550 ORTHO05D004336 8.3e-36 154.1 130 55.4
Ca_12963_v3 Cicer arietinum L. HOM05D003550 ORTHO05D004336 1.1e-35 153.7 130 54.6
Lalb_Chr04g0264171 Lupinus albus HOM05D003550 ORTHO05D004336 1.1e-35 153.7 130 55.4
Nitab4.5_0003481g0090 Nicotiana tabacum HOM05D003550 ORTHO05D004336 1.1e-35 153.7 130 53.8
FvH4_7g03470 Fragaria vesca HOM05D003550 ORTHO05D004336 1.4e-35 153.3 133 56.4
FAN06G0346 Fragaria x ananassa HOM05D003550 ORTHO05D004336 1.4e-35 153.3 133 56.4
Prupe.2G040800 Prunus persica HOM05D003550 ORTHO05D004336 1.4e-35 153.3 130 56.2
Actinidia10150 Actinidia chinensis HOM05D003550 ORTHO05D004336 1.9e-35 152.9 130 55.4
CANSAT56G1944 Cannabis sativa HOM05D003550 ORTHO05D004336 1.9e-35 152.9 130 56.2
Gohir.A05G399700 Gossypium hirsutum HOM05D003550 ORTHO05D004336 1.9e-35 152.9 132 55.3
Gorai.012G018700 Gossypium raimondii HOM05D003550 ORTHO05D004336 1.9e-35 152.9 132 55.3
Rhsim07G0068000 Rhododendron simsii HOM05D003550 ORTHO05D004336 1.9e-35 152.9 130 54.6
RcHm_v2.0_Chr1g0325801 Rosa chinensis HOM05D003550 ORTHO05D004336 1.9e-35 152.9 133 56.4
CDE09G0620 Ceratophyllum demersum HOM05D003550 ORTHO05D004336 2.4e-35 152.5 130 54.6
Actinidia06226 Actinidia chinensis HOM05D003550 ORTHO05D004336 3.2e-35 152.1 130 55.4
MD02G1282100 Malus domestica HOM05D003550 ORTHO05D004336 3.2e-35 152.1 130 56.2
MSTRG.5071 Avicennia marina HOM05D003550 ORTHO05D004336 4.1e-35 151.8 131 55.0
Migut.N01852 Erythranthe guttata HOM05D003550 ORTHO05D004336 5.4e-35 151.4 130 56.2
Oeu013090.1 Olea europaea HOM05D003550 ORTHO05D004336 5.4e-35 151.4 130 55.4
PGR031G1017 Punica granatum HOM05D003550 ORTHO05D004336 5.4e-35 151.4 130 57.7
DCAR_001913 Daucus carota HOM05D003550 ORTHO05D004336 7.1e-35 151.0 130 55.4
Gohir.D04G016100 Gossypium hirsutum HOM05D003550 ORTHO05D004336 7.1e-35 151.0 132 54.5
Peaxi162Scf00082g00122 Petunia axillaris HOM05D003550 ORTHO05D004336 7.1e-35 151.0 130 53.8
Zm00001eb350870 Zea mays HOM05D003550 ORTHO05D004336 9.2e-35 150.6 131 53.4
Solyc01g096490.3 Solanum lycopersicum HOM05D003550 ORTHO05D004336 2.1e-34 149.4 139 52.5
Sopen01g040220 Solanum pennellii HOM05D003550 ORTHO05D004336 2.1e-34 149.4 139 52.5
Sc10g0004490 Simmondsia chinensis HOM05D003550 ORTHO05D004336 3.5e-34 148.7 130 56.2
CAN.G1045.18 Capsicum annuum HOM05D003550 ORTHO05D004336 4.6e-34 148.3 133 52.6
Glyma.13G195200 Glycine max HOM05D003550 ORTHO05D004336 4.6e-34 148.3 139 51.1
Zm00001eb287260 Zea mays HOM05D003550 ORTHO05D004336 6.0e-34 147.9 131 52.7
Medtr3g014090 Medicago truncatula HOM05D003550 ORTHO05D004336 7.8e-34 147.5 133 56.4
TWI15G0170 Tripterygium wilfordii HOM05D003550 ORTHO05D004336 2.3e-33 146.0 130 52.3
FAN01G2608 Fragaria x ananassa HOM05D003550 ORTHO05D004336 6.6e-33 144.4 145 51.7
FAN10G1007 Fragaria x ananassa HOM05D003550 ORTHO05D004336 6.6e-33 144.4 145 51.7
SGA_v2.0_scaffold232G43498 Striga asiatica HOM05D003550 ORTHO05D004336 1.1e-32 143.7 132 54.5
FAN03G0411 Fragaria x ananassa HOM05D003550 ORTHO05D004336 1.5e-32 143.3 145 51.0
unitig_0.g2291 Utricularia gibba HOM05D003550 ORTHO05D004336 1.9e-32 142.9 129 50.4
TWI38G1858 Tripterygium wilfordii HOM05D003550 ORTHO05D004336 2.5e-32 142.5 130 50.8
vmacro13761 Vaccinium macrocarpon HOM05D003550 ORTHO05D004336 3.3e-32 142.1 150 48.0
HPP92_001023 Vanilla planifolia HOM05D003550 ORTHO05D004336 6.8e-30 134.4 131 50.4
CBR_g16035 Chara braunii HOM05D003550 ORTHO05D004336 2.2e-28 129.4 122 46.7
CSS0027876 Camellia sinensis var. sinensis HOM05D003550 ORTHO05D004336 2.9e-28 129.0 129 48.8
Actinidia06972 Actinidia chinensis HOM05D003550 ORTHO05D004336 4.1e-27 125.2 128 47.7
Actinidia24461 Actinidia chinensis HOM05D003550 ORTHO05D004336 9.2e-27 124.0 129 48.8
Haze_23247 Corylus avellana HOM05D003550 ORTHO05D004336 2.1e-26 122.9 131 46.6
CsaV3_6G038940 Cucumis sativus L. HOM05D003550 ORTHO05D004336 2.7e-26 122.5 131 47.3
vmacro04042 Vaccinium macrocarpon HOM05D003550 ORTHO05D004336 3.5e-26 122.1 129 48.8
Sed0016122 Sechium edule HOM05D003550 ORTHO05D004336 1.7e-25 119.8 131 47.3
Cfa009883 Carpinus fangiana HOM05D003550 ORTHO05D004336 3.9e-25 118.6 128 46.1
MELO3C014558.2 Cucumis melo HOM05D003550 ORTHO05D004336 1.9e-24 116.3 131 46.6
QL01p016949 Quercus lobata HOM05D003550 ORTHO05D004336 1.9e-24 116.3 131 47.3
CiPaw.14G112000 Carya illinoinensis HOM05D003550 ORTHO05D004336 1.6e-23 113.2 131 44.3
Potri.001G274900 Populus trichocarpa HOM05D003550 ORTHO05D004336 8.1e-23 110.9 130 42.3
Sabra16G0169400 Salix brachista HOM05D003550 ORTHO05D004336 1.8e-22 109.8 130 41.5
Sabra16G0169200 Salix brachista HOM05D003550 ORTHO05D004336 2.4e-22 109.4 130 41.5
Lj9C657T7 Lonicera japonica HOM05D003550 ORTHO05D004336 2.0e-21 106.3 79 60.8
BcaC06g34238 Brassica carinata HOM05D001392 ORTHO05D032327 2.9e-20 102.4 66 72.7
SHI04010 Sapria himalayana HOM05D003550 ORTHO05D004336 8.4e-20 100.9 79 54.4
C04p41180 Brassica napus HOM05D003550 ORTHO05D032327 9.3e-19 97.4 64 70.3
BolC4t25700H Brassica oleracea HOM05D003550 ORTHO05D032327 9.3e-19 97.4 64 70.3
COL.COLO4_20694 Corchorus olitorius HOM05D003550 ORTHO05D004336 9.3e-19 97.4 93 44.1
BcaB01g02474 Brassica carinata HOM05D003550 ORTHO05D004336 2.1e-18 96.3 130 44.6
HPP92_003596 Vanilla planifolia HOM05D003550 ORTHO05D004336 1.3e-17 93.6 93 43.0
Glyma.15G233600 Glycine max HOM05D003550 ORTHO05D004336 2.3e-17 92.8 102 41.2
HanXRQChr15g0481011 Helianthus annuus HOM05D003550 ORTHO05D004336 3.6e-15 85.5 106 39.6
SMO271G0120 Selaginella moellendorffii HOM05D003550 ORTHO05D004336 1.1e-14 84.0 102 37.3
Rhsim13G0208400 Rhododendron simsii HOM05D003550 ORTHO05D004336 1.4e-14 83.6 103 35.9
BolC9t58620H Brassica oleracea HOM05D003550 ORTHO05D004336 5.3e-14 81.6 49 75.5
C03p76060 Brassica napus HOM05D000516 ORTHO05D000409 1.3e-12 77.0 67 56.7
BcaC02g08867 Brassica carinata HOM05D000052 ORTHO05D000046 2.7e-10 69.3 61 60.7
CBR_g21745 Chara braunii HOM05D003550 ORTHO05D004336 4.6e-10 68.6 94 36.2
Atru.chr12.1265 Acer truncatum HOM05D003550 ORTHO05D004336 7.9e-10 67.8 61 54.1
Glyma.15G233567 Glycine max HOM05D003550 ORTHO05D004336 5.1e-09 65.1 57 50.9
COL.COLO4_20695 Corchorus olitorius HOM05D003550 ORTHO05D004336 1.1e-08 63.9 54 55.6
CBR_g26207 Chara braunii HOM05D003550 ORTHO05D004336 1.5e-08 63.5 92 37.0
CBR_g22349 Chara braunii HOM05D003550 ORTHO05D004336 3.3e-08 62.4 74 41.9
Lj9C657G2 Lonicera japonica HOM05D003550 ORTHO05D004336 2.1e-07 59.7 53 54.7
A09p35170 Brassica napus HOM05D003550 ORTHO05D004336 4.8e-07 58.5 38 68.4
Glyma.04G134700 Glycine max HOM05D003550 ORTHO05D004336 6.2e-07 58.2 52 51.9
BolC2t06568H Brassica oleracea HOM05D003550 ORTHO05D004336 9.0e-06 54.3 84 31.0


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