Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB01g03062 Brassica carinata HOM05D006311 ORTHO05D007732 4.5e-101 371.3 195 100.0
BcaB01g03063 Brassica carinata HOM05D006311 ORTHO05D007732 4.5e-101 371.3 195 100.0
Sp4g10100 Schrenkiella parvula HOM05D006311 ORTHO05D007732 1.6e-85 319.7 200 87.5
A04p20870 Brassica napus HOM05D006311 ORTHO05D007732 4.0e-81 305.1 202 85.6
C04p56680 Brassica napus HOM05D006311 ORTHO05D007732 6.8e-81 304.3 202 86.1
BolC4t27200H Brassica oleracea HOM05D006311 ORTHO05D007732 6.8e-81 304.3 202 86.1
Carub.0004s0790 Capsella rubella HOM05D006311 ORTHO05D007732 5.7e-80 301.2 194 86.6
CARHR119830 Cardamine hirsuta HOM05D006311 ORTHO05D007732 5.7e-80 301.2 196 84.7
BcaB06g28142 Brassica carinata HOM05D006311 ORTHO05D007732 1.7e-79 299.7 202 85.6
AT2G27290 Arabidopsis thaliana HOM05D006311 ORTHO05D007732 1.4e-78 296.6 197 81.2
BolC4t27194H Brassica oleracea HOM05D006311 ORTHO05D007732 1.8e-78 296.2 202 85.1
BcaB06g28139 Brassica carinata HOM05D006311 ORTHO05D007732 1.6e-77 293.1 195 85.1
AL4G21210 Arabidopsis lyrata HOM05D006311 ORTHO05D007732 1.0e-76 290.4 196 81.1
Thhalv10002100m.g Eutrema salsugineum HOM05D006311 ORTHO05D007732 2.3e-76 289.3 206 82.0
BraA04t17659Z Brassica rapa HOM05D001305 ORTHO05D007732 7.5e-72 274.2 201 78.6
Aa31LG5G8700 Aethionema arabicum HOM05D006311 ORTHO05D007732 3.7e-71 271.9 195 79.0
Cpa.g.sc195.39 Carica papaya HOM05D006311 ORTHO05D007732 8.3e-63 244.2 189 72.0
THA.LOC104826442 Tarenaya hassleriana HOM05D006311 ORTHO05D007732 2.3e-60 236.1 201 70.6
Dinv05953 Davidia involucrata HOM05D006311 ORTHO05D007732 1.6e-58 229.9 180 68.9
FvH4_3g25980 Fragaria vesca HOM05D006311 ORTHO05D007732 4.7e-58 228.4 200 66.0
FAN11G0814 Fragaria x ananassa HOM05D006311 ORTHO05D007732 4.7e-58 228.4 200 66.0
Sc21g0006890 Simmondsia chinensis HOM05D006311 ORTHO05D007732 4.7e-58 228.4 191 66.0
Thecc.09G276000 Theobroma cacao HOM05D006311 ORTHO05D007732 1.4e-57 226.9 185 71.4
ClCG02G022370 Citrullus lanatus HOM05D006311 ORTHO05D007732 1.8e-57 226.5 175 71.4
Migut.D02415 Erythranthe guttata HOM05D006311 ORTHO05D007732 3.1e-57 225.7 192 68.8
Oeu048845.1 Olea europaea HOM05D006311 ORTHO05D007732 3.1e-57 225.7 201 67.7
Lj3g0006801 Lotus japonicus HOM05D006311 ORTHO05D007732 4.0e-57 225.3 159 77.4
FAN25G1023 Fragaria x ananassa HOM05D006311 ORTHO05D007732 5.2e-57 224.9 189 67.2
Nitab4.5_0000893g0010 Nicotiana tabacum HOM05D006311 ORTHO05D007732 5.2e-57 224.9 172 73.3
Rhsim01G0202100 Rhododendron simsii HOM05D006311 ORTHO05D007732 6.8e-57 224.6 162 75.9
Cc01_g08620 Coffea canephora HOM05D006311 ORTHO05D007732 8.9e-57 224.2 199 66.8
Nitab4.5_0001135g0160 Nicotiana tabacum HOM05D006311 ORTHO05D007732 3.4e-56 222.2 173 71.7
FAN21G2836 Fragaria x ananassa HOM05D006311 ORTHO05D007732 4.4e-56 221.9 200 64.5
PGR119G0707 Punica granatum HOM05D006311 ORTHO05D007732 4.4e-56 221.9 192 66.1
CSS0008256 Camellia sinensis var. sinensis HOM05D006311 ORTHO05D007732 5.8e-56 221.5 172 72.1
CSS0012591 Camellia sinensis var. sinensis HOM05D006311 ORTHO05D007732 5.8e-56 221.5 172 72.1
MELO3C014513.2 Cucumis melo HOM05D006311 ORTHO05D007732 9.8e-56 220.7 163 74.2
Sed0028181 Sechium edule HOM05D006311 ORTHO05D007732 9.8e-56 220.7 163 74.8
Sopen11g027510 Solanum pennellii HOM05D006311 ORTHO05D007732 9.8e-56 220.7 173 72.8
CsaV3_6G038500 Cucumis sativus L. HOM05D006311 ORTHO05D007732 1.3e-55 220.3 163 74.2
Gohir.A09G097700 Gossypium hirsutum HOM05D006311 ORTHO05D007732 1.3e-55 220.3 167 73.1
Gorai.006G114200 Gossypium raimondii HOM05D006311 ORTHO05D007732 1.3e-55 220.3 167 73.1
TWI31G0202 Tripterygium wilfordii HOM05D006311 ORTHO05D007732 1.3e-55 220.3 162 74.1
FAN16G2986 Fragaria x ananassa HOM05D006311 ORTHO05D007732 1.7e-55 219.9 200 64.0
Glyma.12G093300 Glycine max HOM05D006311 ORTHO05D007732 2.9e-55 219.2 168 71.4
Solyc11g068790.2 Solanum lycopersicum HOM05D006311 ORTHO05D007732 3.7e-55 218.8 173 71.1
PGSC0003DMG400019619 Solanum tuberosum HOM05D006311 ORTHO05D007732 3.7e-55 218.8 177 71.2
VMungo1127G2206 Vigna mungo HOM05D006311 ORTHO05D007732 3.7e-55 218.8 167 70.1
Atru.chr3.3143 Acer truncatum HOM05D006311 ORTHO05D007732 6.4e-55 218.0 198 65.2
Gohir.D09G097500 Gossypium hirsutum HOM05D006311 ORTHO05D007732 6.4e-55 218.0 167 71.9
GSVIVG01036060001 Vitis vinifera HOM05D006311 ORTHO05D007732 6.4e-55 218.0 164 73.8
AUR62001536 Chenopodium quinoa HOM05D006311 ORTHO05D007732 8.3e-55 217.6 158 73.4
Manes.11G165200 Manihot esculenta HOM05D006311 ORTHO05D007732 1.1e-54 217.2 196 63.8
Peaxi162Scf00224g00818 Petunia axillaris HOM05D006311 ORTHO05D007732 1.1e-54 217.2 166 71.7
CiPaw.13G131700 Carya illinoinensis HOM05D006311 ORTHO05D007732 1.4e-54 216.9 162 73.5
Glyma.11G180200 Glycine max HOM05D006311 ORTHO05D007732 1.4e-54 216.9 168 70.2
QL01p011364 Quercus lobata HOM05D006311 ORTHO05D007732 1.4e-54 216.9 184 65.8
QL01p011627 Quercus lobata HOM05D006311 ORTHO05D007732 2.4e-54 216.1 191 64.9
vmacro14327 Vaccinium macrocarpon HOM05D006311 ORTHO05D007732 2.4e-54 216.1 168 70.2
Medtr4g052010 Medicago truncatula HOM05D006311 ORTHO05D007732 3.2e-54 215.7 190 66.3
MSTRG.18783 Avicennia marina HOM05D006311 ORTHO05D007732 4.1e-54 215.3 192 66.7
Psat7g187040 Pisum sativum HOM05D006311 ORTHO05D007732 4.1e-54 215.3 194 66.0
RcHm_v2.0_Chr5g0047271 Rosa chinensis HOM05D006311 ORTHO05D007732 4.1e-54 215.3 204 63.2
MD11G1172600 Malus domestica HOM05D006311 ORTHO05D007732 5.4e-54 214.9 166 72.3
COL.COLO4_22654 Corchorus olitorius HOM05D006311 ORTHO05D007732 7.0e-54 214.5 171 71.3
CAN.G745.31 Capsicum annuum HOM05D006311 ORTHO05D007732 9.2e-54 214.2 177 68.4
Actinidia07269 Actinidia chinensis HOM05D006311 ORTHO05D007732 1.2e-53 213.8 169 69.8
Duzib150G1639 Durio zibethinus HOM05D006311 ORTHO05D007732 1.2e-53 213.8 149 78.5
Lalb_Chr01g0004961 Lupinus albus HOM05D006311 ORTHO05D007732 1.6e-53 213.4 163 71.8
Cfa009969 Carpinus fangiana HOM05D006311 ORTHO05D007732 2.0e-53 213.0 196 62.8
Phvul.011G097600 Phaseolus vulgaris HOM05D006311 ORTHO05D007732 2.0e-53 213.0 197 61.9
arahy.Tifrunner.gnm1.ann1.INBK63 Arachis hypogaea HOM05D006311 ORTHO05D007732 2.7e-53 212.6 163 71.8
Lsat_1_v5_gn_2_35940 Lactuca sativa HOM05D006311 ORTHO05D007732 2.7e-53 212.6 151 76.2
CANSAT54G0913 Cannabis sativa HOM05D006311 ORTHO05D007732 4.6e-53 211.8 159 73.6
SalBow6G1677 Salvia bowleyana HOM05D006311 ORTHO05D007732 4.6e-53 211.8 201 64.7
TAR623G0571 Trochodendron aralioides HOM05D006311 ORTHO05D007732 4.6e-53 211.8 203 64.0
arahy.Tifrunner.gnm1.ann1.HB0RZJ Arachis hypogaea HOM05D006311 ORTHO05D007732 6.0e-53 211.5 163 71.2
MSTRG.21022 Avicennia marina HOM05D006311 ORTHO05D007732 7.8e-53 211.1 203 64.0
HanXRQChr14g0433141 Helianthus annuus HOM05D006311 ORTHO05D007732 7.8e-53 211.1 193 64.2
DCAR_010317 Daucus carota HOM05D006311 ORTHO05D007732 1.3e-52 210.3 175 66.9
TPR.G4615 Trifolium pratense HOM05D006311 ORTHO05D007732 1.3e-52 210.3 192 65.6
Potri.009G161800 Populus trichocarpa HOM05D006311 ORTHO05D007732 1.7e-52 209.9 197 62.9
AUR62020246 Chenopodium quinoa HOM05D006311 ORTHO05D007732 2.3e-52 209.5 157 72.6
Eucgr.J00538 Eucalyptus grandis HOM05D006311 ORTHO05D007732 3.9e-52 208.8 163 69.9
BcaC02g08251 Brassica carinata HOM05D006311 ORTHO05D007732 5.0e-52 208.4 157 80.9
Ciclev10029330m.g Citrus clementina HOM05D006311 ORTHO05D007732 5.0e-52 208.4 183 65.0
SGA_v2.0_scaffold7G03983 Striga asiatica HOM05D006311 ORTHO05D007732 5.0e-52 208.4 203 63.1
EL10Ac7g16320 Beta vulgaris HOM05D006311 ORTHO05D007732 2.5e-51 206.1 185 64.3
Lalb_Chr03g0028331 Lupinus albus HOM05D006311 ORTHO05D007732 3.3e-51 205.7 191 62.3
unitig_0.g1470 Utricularia gibba HOM05D006311 ORTHO05D007732 4.3e-51 205.3 157 71.3
BcaC02g08253 Brassica carinata HOM05D006311 ORTHO05D007732 5.6e-51 204.9 195 64.6
Sabra09G0126500 Salix brachista HOM05D006311 ORTHO05D007732 5.6e-51 204.9 161 72.0
Nn2g14263 Nelumbo nucifera HOM05D006311 ORTHO05D007732 7.3e-51 204.5 152 72.4
MBI17_g18935_MAGBIO Magnolia biondii HOM05D006311 ORTHO05D007732 2.1e-50 203.0 177 63.8
ECA238G1364 Erigeron canadensis HOM05D006311 ORTHO05D007732 8.1e-50 201.1 133 80.5
Ca_19458_v3 Cicer arietinum L. HOM05D006311 ORTHO05D007732 1.4e-49 200.3 157 73.2
Ca_29924_v3 Cicer arietinum L. HOM05D006311 ORTHO05D007732 1.4e-49 200.3 198 62.1
PSO384G4643 Papaver somniferum HOM05D006311 ORTHO05D007732 2.6e-48 196.1 180 62.8
Aqoxy4G02682 Aquilegia oxysepala HOM05D006311 ORTHO05D007732 5.8e-48 194.9 196 58.7
PSO339G0926 Papaver somniferum HOM05D006311 ORTHO05D007732 5.8e-48 194.9 188 60.6
Hund20941 Selenicereus undatus HOM05D006311 ORTHO05D007732 5.8e-48 194.9 164 68.3
HPP92_023073 Vanilla planifolia HOM05D006311 ORTHO05D007732 4.1e-46 188.7 175 62.9
Os04g0416000 Oryza sativa ssp. japonica HOM05D006311 ORTHO05D007732 9.2e-46 187.6 148 68.2
SEGI_25108 Sequoiadendron giganteum HOM05D006311 ORTHO05D007732 1.7e-44 183.3 187 58.3
Pp3c14_19090 Physcomitrium patens HOM05D006311 ORTHO05D007732 6.6e-44 181.4 156 63.5
Prupe.6G139600 Prunus persica HOM05D006311 ORTHO05D007732 6.6e-44 181.4 166 63.9
ATR0772G022 Amborella trichopoda HOM05D006311 ORTHO05D007732 5.6e-43 178.3 167 61.7
Mapoly0006s0182 Marchantia polymorpha HOM05D006311 ORTHO05D007732 5.6e-43 178.3 134 70.9
Lj1A261G25 Lonicera japonica HOM05D006311 ORTHO05D007732 2.4e-41 172.9 117 81.2
CBR_g30935 Chara braunii HOM05D006311 ORTHO05D007732 8.9e-41 171.0 165 57.6
SGA_v2.0_scaffold114G31957 Striga asiatica HOM05D006311 ORTHO05D007732 1.2e-40 170.6 119 79.0
SMO146G0331 Selaginella moellendorffii HOM05D006311 ORTHO05D007732 3.4e-40 169.1 132 69.7
CDE02G3359 Ceratophyllum demersum HOM05D006311 ORTHO05D007732 2.9e-39 166.0 127 72.4
Haze_23330 Corylus avellana HOM05D006311 ORTHO05D007732 8.4e-39 164.5 121 73.6
AagrBONN_evm.TU.Sc2ySwM_117.22 Anthoceros agrestis HOM05D006311 ORTHO05D007732 6.0e-37 158.3 188 50.5
MD03G1152600 Malus domestica HOM05D006311 ORTHO05D007732 4.3e-35 152.1 111 73.9
PRCOL_00001321 Prasinoderma coloniale HOM05D006311 ORTHO05D007732 1.8e-33 146.7 142 60.6
MCO12G429 Micromonas commoda HOM05D006311 ORTHO05D007732 3.1e-33 146.0 136 58.1
BraA04t17657Z Brassica rapa HOM05D006311 ORTHO05D007732 4.0e-33 145.6 88 89.8
Cre12.g485850 Chlamydomonas reinhardtii HOM05D006311 ORTHO05D007732 5.2e-33 145.2 142 54.9
Gohir.D07G115550 Gossypium hirsutum HOM05D006311 ORTHO05D007732 2.7e-29 132.9 87 80.5
A04p20840 Brassica napus HOM05D006311 ORTHO05D007732 6.0e-29 131.7 80 90.0
Gohir.A07G112050 Gossypium hirsutum HOM05D006311 ORTHO05D007732 6.0e-29 131.7 91 78.0
Gorai.001G123800 Gossypium raimondii HOM05D006311 ORTHO05D007732 1.0e-28 131.0 87 79.3
Oeu009055.1 Olea europaea HOM05D000182 ORTHO05D000112 2.6e-24 116.3 92 69.6
Actinidia24237 Actinidia chinensis HOM05D006311 ORTHO05D007732 2.1e-21 106.7 140 50.7
Zm00001eb422070 Zea mays HOM05D006311 ORTHO05D007732 1.1e-19 100.9 110 52.7
CDE08G1250 Ceratophyllum demersum HOM05D006311 ORTHO05D007732 1.5e-16 90.5 181 35.9
Mapoly0036s0025 Marchantia polymorpha HOM05D006047 ORTHO05D007353 1.4e-06 57.4 105 35.2


User provided reference genes

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