Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB01g02944 Brassica carinata HOM05D006686 ORTHO05D008463 1.0e-276 956.1 465 100.0
BcaC01g04848 Brassica carinata HOM05D006686 ORTHO05D008463 5.6e-267 923.7 467 96.6
BolC3t15644H Brassica oleracea HOM05D006686 ORTHO05D008463 5.6e-267 923.7 467 96.6
C03p33220 Brassica napus HOM05D006686 ORTHO05D008463 1.1e-265 919.5 467 96.1
BraA03t11965Z Brassica rapa HOM05D006686 ORTHO05D008463 1.5e-264 915.6 467 95.7
A03p27520 Brassica napus HOM05D006686 ORTHO05D008463 1.7e-260 902.1 498 90.0
Sp6g11350 Schrenkiella parvula HOM05D006686 ORTHO05D008463 1.4e-246 855.9 468 90.2
Sp4g17050 Schrenkiella parvula HOM05D006686 ORTHO05D008463 2.6e-240 835.1 468 87.6
AL4G13300 Arabidopsis lyrata HOM05D006686 ORTHO05D008463 6.7e-236 820.5 470 86.2
AT2G23390 Arabidopsis thaliana HOM05D006686 ORTHO05D008463 8.2e-234 813.5 471 84.9
Carub.0004s0259 Capsella rubella HOM05D006686 ORTHO05D008463 1.4e-233 812.8 471 84.9
Thhalv10013635m.g Eutrema salsugineum HOM05D006686 ORTHO05D008463 4.2e-230 801.2 426 90.8
Aa31LG3G6890 Aethionema arabicum HOM05D006686 ORTHO05D008463 3.2e-222 775.0 450 82.0
THA.LOC104809035 Tarenaya hassleriana HOM05D006686 ORTHO05D008463 1.8e-204 716.1 463 76.0
Gorai.011G003800 Gossypium raimondii HOM05D006686 ORTHO05D008463 1.3e-199 699.9 467 72.4
Gohir.D10G003400 Gossypium hirsutum HOM05D006686 ORTHO05D008463 5.0e-199 698.0 467 72.2
Gohir.A10G003400 Gossypium hirsutum HOM05D006686 ORTHO05D008463 1.6e-197 693.0 467 71.7
Cfa004450 Carpinus fangiana HOM05D006686 ORTHO05D008463 4.7e-197 691.4 467 73.0
QL02p103152 Quercus lobata HOM05D006686 ORTHO05D008463 2.8e-194 682.2 470 71.7
Duzib235G0699 Durio zibethinus HOM05D006686 ORTHO05D008463 3.7e-194 681.8 470 70.4
MD08G1247400 Malus domestica HOM05D006686 ORTHO05D008463 4.9e-194 681.4 473 70.0
Manes.07G028500 Manihot esculenta HOM05D006686 ORTHO05D008463 1.8e-193 679.5 472 70.3
Prupe.1G584700 Prunus persica HOM05D006686 ORTHO05D008463 2.4e-193 679.1 490 69.8
Thecc.06G000500 Theobroma cacao HOM05D006686 ORTHO05D008463 3.1e-193 678.7 470 70.4
COL.COLO4_26876 Corchorus olitorius HOM05D006686 ORTHO05D008463 4.1e-193 678.3 479 69.5
Potri.004G228500 Populus trichocarpa HOM05D006686 ORTHO05D008463 9.1e-193 677.2 468 70.7
ClCG10G007390 Citrullus lanatus HOM05D006686 ORTHO05D008463 4.5e-192 674.9 467 71.9
Sabra01G0173400 Salix brachista HOM05D006686 ORTHO05D008463 7.7e-192 674.1 468 69.9
CsaV3_3G006630 Cucumis sativus L. HOM05D006686 ORTHO05D008463 1.1e-190 670.2 466 71.5
MELO3C016473.2 Cucumis melo HOM05D006686 ORTHO05D008463 1.5e-190 669.8 466 71.5
CANSAT01G1449 Cannabis sativa HOM05D006686 ORTHO05D008463 2.5e-190 669.1 468 70.1
Nn5g27352 Nelumbo nucifera HOM05D006686 ORTHO05D008463 5.5e-190 667.9 476 68.1
GSVIVG01023154001 Vitis vinifera HOM05D006686 ORTHO05D008463 2.8e-189 665.6 474 68.4
FvH4_5g27990 Fragaria vesca HOM05D006686 ORTHO05D008463 1.8e-188 662.9 469 69.5
PGR042G1861 Punica granatum HOM05D006686 ORTHO05D008463 1.2e-187 660.2 433 72.7
Dinv29673 Davidia involucrata HOM05D006686 ORTHO05D008463 1.5e-187 659.8 483 66.7
FAN18G1657 Fragaria x ananassa HOM05D006686 ORTHO05D008463 4.4e-187 658.3 474 69.0
TAR381G1724 Trochodendron aralioides HOM05D006686 ORTHO05D008463 7.5e-187 657.5 452 69.5
FAN04G2541 Fragaria x ananassa HOM05D006686 ORTHO05D008463 9.8e-187 657.1 469 68.9
TWI59G1206 Tripterygium wilfordii HOM05D006686 ORTHO05D008463 2.4e-185 652.5 470 68.5
Migut.B00728 Erythranthe guttata HOM05D006686 ORTHO05D008463 2.3e-183 646.0 457 68.7
MBI03_g20875_MAGBIO Magnolia biondii HOM05D006686 ORTHO05D008463 2.9e-183 645.6 449 68.8
CSS0008654 Camellia sinensis var. sinensis HOM05D006686 ORTHO05D008463 6.6e-183 644.4 439 69.2
Ah.03g136810 Amaranthus hybridus HOM05D006686 ORTHO05D008463 4.7e-181 638.3 471 65.8
Eucgr.G00081 Eucalyptus grandis HOM05D006686 ORTHO05D008463 4.7e-181 638.3 454 68.7
Lj4g0021342 Lotus japonicus HOM05D006686 ORTHO05D008463 4.7e-181 638.3 388 76.3
vmacro19835 Vaccinium macrocarpon HOM05D006686 ORTHO05D008463 6.1e-181 637.9 452 68.6
HanXRQChr01g0013991 Helianthus annuus HOM05D006686 ORTHO05D008463 1.4e-180 636.7 442 68.1
ECA236G4971 Erigeron canadensis HOM05D006686 ORTHO05D008463 1.7e-178 629.8 431 69.8
ATR1089G117 Amborella trichopoda HOM05D006686 ORTHO05D008463 3.7e-178 628.6 473 64.9
Glyma.07G273000 Glycine max HOM05D006686 ORTHO05D008463 1.9e-177 626.3 397 75.3
SGA_v2.0_scaffold254G45251 Striga asiatica HOM05D006686 ORTHO05D008463 3.2e-177 625.5 449 66.4
Nitab4.5_0001129g0010 Nicotiana tabacum HOM05D006686 ORTHO05D008463 4.1e-177 625.2 429 69.9
DCAR_022282 Daucus carota HOM05D006686 ORTHO05D008463 7.0e-177 624.4 467 65.3
VMungo1215G3175 Vigna mungo HOM05D006686 ORTHO05D008463 7.0e-177 624.4 402 73.9
Phvul.003G075600 Phaseolus vulgaris HOM05D006686 ORTHO05D008463 1.6e-176 623.2 402 74.4
MSTRG.16472 Avicennia marina HOM05D006686 ORTHO05D008463 4.6e-176 621.7 447 66.2
Lsat_1_v5_gn_7_75180 Lactuca sativa HOM05D006686 ORTHO05D008463 1.0e-175 620.5 448 67.2
Nitab4.5_0001057g0120 Nicotiana tabacum HOM05D006686 ORTHO05D008463 1.7e-175 619.8 429 68.8
arahy.Tifrunner.gnm1.ann1.A5H9W7 Arachis hypogaea HOM05D006686 ORTHO05D008463 2.3e-175 619.4 476 64.1
Cc02_g23500 Coffea canephora HOM05D006686 ORTHO05D008463 3.9e-175 618.6 440 67.5
CDE04G2622 Ceratophyllum demersum HOM05D006686 ORTHO05D008463 5.0e-175 618.2 426 68.1
PSO210G5299 Papaver somniferum HOM05D006686 ORTHO05D008463 8.6e-175 617.5 450 66.0
Peaxi162Scf00011g01843 Petunia axillaris HOM05D006686 ORTHO05D008463 1.9e-174 616.3 429 69.0
arahy.Tifrunner.gnm1.ann1.KKPS0T Arachis hypogaea HOM05D006686 ORTHO05D003399 2.5e-174 615.9 472 64.0
Sed0016336 Sechium edule HOM05D006686 ORTHO05D008463 4.3e-174 615.1 364 78.6
PGSC0003DMG402024871 Solanum tuberosum HOM05D006686 ORTHO05D008463 1.2e-173 613.6 446 66.1
Solyc01g103110.3 Solanum lycopersicum HOM05D006686 ORTHO05D008463 8.1e-173 610.9 427 67.7
unitig_22.g6102 Utricularia gibba HOM05D006686 ORTHO05D008463 1.4e-172 610.1 462 66.0
Os04g0442200 Oryza sativa ssp. japonica HOM05D006686 ORTHO05D008463 2.3e-172 609.4 451 65.6
RcHm_v2.0_Chr7g0220181 Rosa chinensis HOM05D006686 ORTHO05D008463 2.3e-172 609.4 368 78.0
Sopen01g045530 Solanum pennellii HOM05D006686 ORTHO05D008463 5.2e-172 608.2 427 67.7
CAN.G855.45 Capsicum annuum HOM05D006686 ORTHO05D008463 1.2e-171 607.1 444 66.2
Lalb_Chr07g0176791 Lupinus albus HOM05D006686 ORTHO05D008463 2.6e-171 605.9 435 67.4
Ca_13532_v3 Cicer arietinum L. HOM05D006686 ORTHO05D008463 5.8e-171 604.7 395 72.4
HPP92_005637 Vanilla planifolia HOM05D006686 ORTHO05D008463 9.8e-171 604.0 476 61.3
HPP92_005643 Vanilla planifolia HOM05D006686 ORTHO05D008463 2.1e-168 596.3 432 65.0
Lj9C281G9 Lonicera japonica HOM05D006686 ORTHO05D008463 3.9e-167 592.0 442 65.2
EL10Ac6g14006 Beta vulgaris HOM05D006686 ORTHO05D008463 5.1e-167 591.7 494 60.1
Psat4g001080 Pisum sativum HOM05D006686 ORTHO05D008463 1.1e-166 590.5 402 68.7
Medtr4g134670 Medicago truncatula HOM05D006686 ORTHO05D008463 2.1e-165 586.3 391 70.8
Zm00001eb423040 Zea mays HOM05D006686 ORTHO05D008463 2.8e-165 585.9 450 62.7
TPR.G5968 Trifolium pratense HOM05D006686 ORTHO05D008463 5.2e-164 581.6 385 72.5
Cpa.g.sc113.25 Carica papaya HOM05D006686 ORTHO05D008463 4.4e-163 578.6 463 64.1
SEGI_40259 Sequoiadendron giganteum HOM05D006686 ORTHO05D008463 3.9e-159 565.5 427 64.9
Mapoly0007s0219 Marchantia polymorpha HOM05D006686 ORTHO05D008463 3.3e-158 562.4 448 60.3
Rhsim05G0116000 Rhododendron simsii HOM05D006686 ORTHO05D008463 8.9e-156 554.3 480 60.0
AagrBONN_evm.TU.Sc2ySwM_362.840 Anthoceros agrestis HOM05D006686 ORTHO05D008463 2.0e-155 553.1 447 60.2
Pp3c21_14930 Physcomitrium patens HOM05D006686 ORTHO05D008463 1.3e-154 550.4 435 61.4
Ciclev10001220m.g Citrus clementina HOM05D006686 ORTHO05D008463 2.1e-152 543.1 481 58.6
Atru.chr6.339 Acer truncatum HOM05D006686 ORTHO05D008463 3.6e-149 532.3 395 65.1
CiPaw.06G176300 Carya illinoinensis HOM05D006686 ORTHO05D008463 4.8e-149 531.9 334 75.7
SMO364G0094 Selaginella moellendorffii HOM05D006686 ORTHO05D008463 1.5e-139 500.4 370 64.1
Aqoxy5G01865 Aquilegia oxysepala HOM05D006686 ORTHO05D008463 4.5e-139 498.8 456 55.5
Sc03g0004960 Simmondsia chinensis HOM05D006686 ORTHO05D008463 1.1e-126 457.6 447 52.8
PSO447G0166 Papaver somniferum HOM05D006686 ORTHO05D008463 2.3e-119 433.3 450 50.7
Haze_09995 Corylus avellana HOM05D006686 ORTHO05D008463 6.7e-103 378.6 212 84.4
Actinidia01629 Actinidia chinensis HOM05D006686 ORTHO05D008463 4.5e-99 365.9 327 57.8
Cre09.g399626 Chlamydomonas reinhardtii HOM05D006686 ORTHO05D008463 1.5e-97 360.9 454 42.5
Haze_27211 Corylus avellana HOM05D006686 ORTHO05D008463 1.9e-97 360.5 381 46.7
Glyma.17G001600 Glycine max HOM05D006686 ORTHO05D008463 1.7e-93 347.4 259 69.5
PRCOL_00000210 Prasinoderma coloniale HOM05D006686 ORTHO05D008463 5.9e-91 339.0 455 42.4
RcHm_v2.0_Chr7g0220471 Rosa chinensis HOM05D006686 ORTHO05D008463 6.3e-85 318.9 219 72.1
FAN08G3117 Fragaria x ananassa HOM05D006686 ORTHO05D008463 2.5e-81 307.0 269 59.5
CARHR293020 Cardamine hirsuta HOM05D006686 ORTHO05D008463 4.7e-80 302.8 158 90.5
Oeu000154.1 Olea europaea HOM05D006686 ORTHO05D008463 8.6e-74 282.0 320 49.4
Eucgr.A00755 Eucalyptus grandis HOM05D006686 ORTHO05D008463 1.9e-57 227.6 147 73.5
AUR62032459 Chenopodium quinoa HOM05D006686 ORTHO05D008463 4.3e-57 226.5 275 45.8
Nitab4.5_0004668g0030 Nicotiana tabacum HOM05D006686 ORTHO05D008463 1.4e-39 168.3 128 63.3
Haze_09994 Corylus avellana HOM05D006686 ORTHO05D008463 1.8e-39 167.9 253 41.5
CBR_g48698 Chara braunii HOM05D006686 ORTHO05D008463 1.4e-28 131.7 123 54.5
MELO3C032221.2 Cucumis melo HOM05D006686 ORTHO05D008463 4.6e-27 126.7 80 77.5
Hund15396 Selenicereus undatus HOM05D006686 ORTHO05D008463 1.5e-25 121.7 76 75.0
Actinidia26190 Actinidia chinensis HOM05D006686 ORTHO05D008463 4.0e-23 113.6 67 77.6
CiPaw.06G176500 Carya illinoinensis HOM05D006686 ORTHO05D008463 3.8e-21 107.1 132 44.7
Haze_05751 Corylus avellana HOM05D006686 ORTHO05D008463 5.1e-18 96.7 88 59.1
CBR_g48699 Chara braunii HOM05D006686 ORTHO05D008463 1.1e-17 95.5 130 36.2
Peaxi162Scf00011g01844 Petunia axillaris HOM05D006686 ORTHO05D008463 4.3e-17 93.6 130 42.3
RcHm_v2.0_Chr7g0220191 Rosa chinensis HOM05D006686 ORTHO05D008463 9.0e-07 59.3 112 33.9


User provided reference genes

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