Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB01g02874 Brassica carinata HOM05D000353 ORTHO05D011975 1.6e-55 219.2 111 100.0
BcaB01g00780 Brassica carinata HOM05D000353 ORTHO05D011975 5.1e-41 171.0 91 95.6
A01p27050 Brassica napus HOM05D000353 ORTHO05D011975 4.6e-26 121.3 85 69.4
BraA01t02839Z Brassica rapa HOM05D000353 ORTHO05D011975 4.6e-26 121.3 85 69.4
C09p64190 Brassica napus HOM05D000353 ORTHO05D011975 2.3e-25 119.0 100 60.0
BolC9t59256H Brassica oleracea HOM05D000353 ORTHO05D011975 2.3e-25 119.0 100 60.0
C09p23340 Brassica napus HOM05D000353 ORTHO05D011975 3.0e-25 118.6 85 67.1
C02p27140 Brassica napus HOM05D000353 ORTHO05D000174 3.9e-25 118.2 85 67.1
C05p35890 Brassica napus HOM05D000353 ORTHO05D011975 3.9e-25 118.2 85 67.1
BolC8t47318H Brassica oleracea HOM05D000353 ORTHO05D011975 3.9e-25 118.2 85 67.1
C02p47690 Brassica napus HOM05D000353 ORTHO05D011975 5.1e-25 117.9 85 67.1
BolC2t10806H Brassica oleracea HOM05D000353 ORTHO05D011975 5.1e-25 117.9 85 67.1
BolC5t31839H Brassica oleracea HOM05D000353 ORTHO05D011975 5.1e-25 117.9 85 67.1
BolC9t57769H Brassica oleracea HOM05D000353 ORTHO05D011975 6.7e-25 117.5 85 65.9
A02p28650 Brassica napus HOM05D000353 ORTHO05D011975 1.1e-24 116.7 85 65.9
BraA02t07900Z Brassica rapa HOM05D000353 ORTHO05D011975 1.1e-24 116.7 85 65.9
C03p63090 Brassica napus HOM05D000353 ORTHO05D011975 1.9e-24 115.9 85 65.9
BolC5t34016H Brassica oleracea HOM05D000353 ORTHO05D011975 1.9e-24 115.9 85 65.9
C09p17510 Brassica napus HOM05D000353 ORTHO05D011975 3.3e-24 115.2 85 65.9
BolC5t34008H Brassica oleracea HOM05D000353 ORTHO05D011975 4.3e-24 114.8 85 64.7
BolC8t48493H Brassica oleracea HOM05D000353 ORTHO05D011975 1.3e-23 113.2 85 67.1
C05p53380 Brassica napus HOM05D000353 ORTHO05D011975 2.1e-23 112.5 85 64.7
BcaC05g27208 Brassica carinata HOM05D000353 ORTHO05D011975 3.7e-23 111.7 111 55.9
BcaC03g15183 Brassica carinata HOM05D000353 ORTHO05D000174 8.2e-23 110.5 99 55.6
BolC7t42422H Brassica oleracea HOM05D000353 ORTHO05D011975 4.0e-22 108.2 74 68.9
BcaC03g15824 Brassica carinata HOM05D000353 ORTHO05D000174 7.6e-21 104.0 85 63.5
BcaC05g27602 Brassica carinata HOM05D000353 ORTHO05D012074 7.6e-21 104.0 85 63.5
A02p28660 Brassica napus HOM05D000353 ORTHO05D012074 7.6e-21 104.0 85 63.5
C05p35880 Brassica napus HOM05D000353 ORTHO05D005681 7.6e-21 104.0 85 63.5
BolC4t26685H Brassica oleracea HOM05D000353 ORTHO05D012074 7.6e-21 104.0 85 63.5
BolC5t34001H Brassica oleracea HOM05D000353 ORTHO05D012074 7.6e-21 104.0 85 63.5
BolC8t48492H Brassica oleracea HOM05D000353 ORTHO05D012074 7.6e-21 104.0 85 63.5
BraA02t07901Z Brassica rapa HOM05D000353 ORTHO05D012074 7.6e-21 104.0 85 63.5
C05p53350 Brassica napus HOM05D000353 ORTHO05D005681 1.0e-20 103.6 85 62.4
BolC2t09049H Brassica oleracea HOM05D000353 ORTHO05D012074 1.0e-20 103.6 85 63.5
C02p27630 Brassica napus HOM05D000353 ORTHO05D012074 2.2e-20 102.4 85 62.4
BcaC06g35171 Brassica carinata HOM05D000353 ORTHO05D012074 2.9e-20 102.1 85 62.4
BolC7t42421H Brassica oleracea HOM05D000353 ORTHO05D012074 2.9e-20 102.1 85 62.4
BcaC06g33696 Brassica carinata HOM05D000353 ORTHO05D012074 3.8e-20 101.7 85 62.4
BcaC04g22103 Brassica carinata HOM05D000353 ORTHO05D012074 4.9e-20 101.3 85 61.2
C09p23330 Brassica napus HOM05D000353 ORTHO05D012074 4.9e-20 101.3 85 61.2
BolC5t32307H Brassica oleracea HOM05D000353 ORTHO05D012074 4.9e-20 101.3 85 62.4
BolC5t34015H Brassica oleracea HOM05D000353 ORTHO05D012074 4.9e-20 101.3 85 62.4
BolC9t55251H Brassica oleracea HOM05D000353 ORTHO05D012074 4.9e-20 101.3 85 61.2
C07p19100 Brassica napus HOM05D000353 ORTHO05D012074 6.5e-20 100.9 85 61.2
C02p47700 Brassica napus HOM05D000353 ORTHO05D012074 1.1e-19 100.1 85 61.2
A05p21300 Brassica napus HOM05D000353 ORTHO05D012074 2.5e-19 99.0 85 60.0
C03p63080 Brassica napus HOM05D000353 ORTHO05D005681 2.5e-19 99.0 85 61.2
BraA05t21038Z Brassica rapa HOM05D000353 ORTHO05D012074 2.5e-19 99.0 85 60.0
BcaC06g36012 Brassica carinata HOM05D000353 ORTHO05D012074 3.2e-19 98.6 85 61.2
BcaC09g50234 Brassica carinata HOM05D000353 ORTHO05D005681 3.2e-19 98.6 77 64.9
A01p27040 Brassica napus HOM05D000353 ORTHO05D012074 4.2e-19 98.2 85 60.0
BraA01t02838Z Brassica rapa HOM05D000353 ORTHO05D012074 4.2e-19 98.2 85 60.0
C07p19110 Brassica napus HOM05D000353 ORTHO05D011975 1.1e-16 90.1 62 66.1
BolC9t57768H Brassica oleracea HOM05D000353 ORTHO05D012074 5.7e-16 87.8 85 56.5
BcaB05g22042 Brassica carinata HOM05D000353 ORTHO05D000199 1.3e-15 86.7 48 91.7
BolC5t32503H Brassica oleracea HOM05D000353 ORTHO05D042563 2.8e-15 85.5 87 51.7
C05p37620 Brassica napus HOM05D000353 ORTHO05D042563 8.2e-15 84.0 87 50.6
C02p27620 Brassica napus HOM05D000353 ORTHO05D005681 1.4e-14 83.2 67 59.7
BcaB03g15977 Brassica carinata HOM05D000353 ORTHO05D005681 2.6e-13 79.0 93 39.8
BcaB07g31315 Brassica carinata HOM05D000353 ORTHO05D093832 1.7e-12 76.3 39 94.9
C02p27150 Brassica napus HOM05D000353 ORTHO05D012074 1.7e-12 76.3 85 51.8
BcaB08g34856 Brassica carinata HOM05D000353 ORTHO05D005681 2.2e-12 75.9 93 38.7
BcaB08g34640 Brassica carinata HOM05D000353 ORTHO05D005681 2.9e-12 75.5 93 36.6
BcaC07g37502 Brassica carinata HOM05D000353 ORTHO05D039805 6.5e-12 74.3 94 45.7
BolC8t47825H Brassica oleracea HOM05D000353 ORTHO05D039805 1.4e-11 73.2 94 45.7
BcaB04g17266 Brassica carinata HOM05D000353 ORTHO05D005681 1.9e-11 72.8 93 36.6
BcaB04g18044 Brassica carinata HOM05D000353 ORTHO05D005681 1.9e-11 72.8 93 36.6
C09p49190 Brassica napus HOM05D000353 ORTHO05D005681 3.2e-11 72.0 64 59.4
BcaB01g01095 Brassica carinata HOM05D000353 ORTHO05D005681 2.7e-10 68.9 93 35.5
BcaB01g01176 Brassica carinata HOM05D000353 ORTHO05D092964 3.6e-10 68.6 75 41.3
BcaB02g10509 Brassica carinata HOM05D000353 ORTHO05D005681 7.9e-10 67.4 85 45.9
BolC5t32308H Brassica oleracea HOM05D000353 ORTHO05D011975 1.4e-09 66.6 73 49.3
BolC8t48064H Brassica oleracea HOM05D000353 ORTHO05D033592 2.3e-09 65.9 91 41.8
BraA05t21039Z Brassica rapa HOM05D000353 ORTHO05D011975 5.1e-09 64.7 42 69.0
A08p10030 Brassica napus HOM05D000353 ORTHO05D033592 1.1e-08 63.5 84 42.9
BraA08t32999Z Brassica rapa HOM05D000353 ORTHO05D033592 5.7e-08 61.2 79 43.0
BcaB03g16214 Brassica carinata HOM05D000353 ORTHO05D005681 4.8e-07 58.2 84 42.9
BcaB03g16076 Brassica carinata HOM05D000353 ORTHO05D005681 1.4e-06 56.6 85 38.8
BcaB02g11108 Brassica carinata HOM05D000353 ORTHO05D005681 2.4e-06 55.8 85 36.5
BcaB02g11477 Brassica carinata HOM05D000353 ORTHO05D005681 2.4e-06 55.8 85 37.6
BcaB01g02451 Brassica carinata HOM05D003591 ORTHO05D021638 5.3e-06 54.7 76 39.5


User provided reference genes

Program Settings