Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB01g02871 Brassica carinata HOM05D006768 ORTHO05D008436 8.7e-51 203.4 105 100.0
Sp6g09840 Schrenkiella parvula HOM05D006768 ORTHO05D008436 4.5e-47 191.0 115 88.7
BcaC01g04777 Brassica carinata HOM05D006768 ORTHO05D008436 5.9e-47 190.7 113 89.4
BolC3t15699H Brassica oleracea HOM05D006768 ORTHO05D008436 5.9e-47 190.7 113 89.4
BraA03t12013Z Brassica rapa HOM05D006768 ORTHO05D008436 7.7e-47 190.3 114 88.6
Thhalv10029535m.g Eutrema salsugineum HOM05D006768 ORTHO05D008436 1.4e-45 186.0 105 91.4
A03p28000 Brassica napus HOM05D006768 ORTHO05D008436 3.0e-43 178.3 107 88.8
C03p33820 Brassica napus HOM05D006768 ORTHO05D008436 3.0e-43 178.3 107 88.8
CARHR259330 Cardamine hirsuta HOM05D006768 ORTHO05D008436 6.9e-40 167.2 111 83.8
AL6G41870 Arabidopsis lyrata HOM05D006768 ORTHO05D008436 1.5e-39 166.0 112 83.0
AT4G08230 Arabidopsis thaliana HOM05D006768 ORTHO05D008436 2.2e-38 162.2 114 80.7
Carub.0006s2676 Capsella rubella HOM05D006768 ORTHO05D008436 2.2e-38 162.2 114 78.9
Hund27041 Selenicereus undatus HOM05D006768 ORTHO05D008436 3.2e-37 158.3 111 76.6
THA.LOC104817125 Tarenaya hassleriana HOM05D006768 ORTHO05D008436 1.2e-36 156.4 109 78.0
arahy.Tifrunner.gnm1.ann1.BFT67J Arachis hypogaea HOM05D006768 ORTHO05D008436 1.6e-36 156.0 112 73.2
arahy.Tifrunner.gnm1.ann1.V4QE5E Arachis hypogaea HOM05D006768 ORTHO05D008436 1.6e-36 156.0 112 73.2
EL10Ac1g00013 Beta vulgaris HOM05D006768 ORTHO05D008436 5.1e-35 151.0 107 71.0
AUR62004718 Chenopodium quinoa HOM05D006768 ORTHO05D008436 3.3e-34 148.3 108 75.0
Lalb_Chr04g0253331 Lupinus albus HOM05D006768 ORTHO05D008436 5.7e-34 147.5 113 70.8
Solyc11g013100.2 Solanum lycopersicum HOM05D006768 ORTHO05D008436 8.2e-33 143.7 105 68.6
Sopen11g008160 Solanum pennellii HOM05D006768 ORTHO05D008436 8.2e-33 143.7 105 68.6
Ciclev10002911m.g Citrus clementina HOM05D006768 ORTHO05D008436 1.8e-32 142.5 108 69.4
CAN.G342.8 Capsicum annuum HOM05D006768 ORTHO05D008436 3.1e-32 141.7 106 72.6
Nitab4.5_0010364g0020 Nicotiana tabacum HOM05D006768 ORTHO05D008436 5.3e-32 141.0 105 68.6
CANSAT25G0473 Cannabis sativa HOM05D006768 ORTHO05D008436 9.1e-32 140.2 112 70.5
PGSC0003DMG400014092 Solanum tuberosum HOM05D006768 ORTHO05D008436 9.1e-32 140.2 106 71.7
CiPaw.06G026900 Carya illinoinensis HOM05D006768 ORTHO05D008436 1.2e-31 139.8 107 72.0
MELO3C011580.2 Cucumis melo HOM05D006768 ORTHO05D008436 1.2e-31 139.8 105 67.6
CAN.G2.37 Capsicum annuum HOM05D006768 ORTHO05D008436 1.6e-31 139.4 106 71.7
ClCG08G005390 Citrullus lanatus HOM05D006768 ORTHO05D008436 1.6e-31 139.4 105 67.6
TWI56G0584 Tripterygium wilfordii HOM05D006768 ORTHO05D008436 1.6e-31 139.4 105 66.7
Lj1g0025240 Lotus japonicus HOM05D006768 ORTHO05D008436 2.0e-31 139.0 116 68.1
unitig_21.g20584 Utricularia gibba HOM05D006768 ORTHO05D008436 2.0e-31 139.0 104 71.2
Phvul.008G165800 Phaseolus vulgaris HOM05D006768 ORTHO05D008436 2.6e-31 138.7 114 69.3
COL.COLO4_38328 Corchorus olitorius HOM05D006768 ORTHO05D008436 3.5e-31 138.3 110 71.8
Atru.chr13.1393 Acer truncatum HOM05D006768 ORTHO05D008436 4.5e-31 137.9 107 70.1
Psat2g079320 Pisum sativum HOM05D006768 ORTHO05D008436 4.5e-31 137.9 107 72.9
Hma1.2p1_0009F.1_g006320 Hydrangea macrophylla HOM05D006768 ORTHO05D008436 5.9e-31 137.5 104 64.4
Migut.C01157 Erythranthe guttata HOM05D006768 ORTHO05D008436 1.0e-30 136.7 110 70.0
Manes.02G160800 Manihot esculenta HOM05D006768 ORTHO05D008436 1.0e-30 136.7 105 68.6
FvH4_2g26460 Fragaria vesca HOM05D006768 ORTHO05D008436 1.3e-30 136.3 105 69.5
Potri.002G086600 Populus trichocarpa HOM05D006768 ORTHO05D008436 1.3e-30 136.3 108 70.4
RcHm_v2.0_Chr6g0295131 Rosa chinensis HOM05D006768 ORTHO05D008436 1.3e-30 136.3 105 69.5
Manes.18G074850 Manihot esculenta HOM05D006768 ORTHO05D008436 1.7e-30 136.0 105 66.7
CSS0001196 Camellia sinensis var. sinensis HOM05D006768 ORTHO05D008436 2.2e-30 135.6 110 70.0
Potri.005G174700 Populus trichocarpa HOM05D006768 ORTHO05D008436 5.0e-30 134.4 108 69.4
FAN24G3387 Fragaria x ananassa HOM05D006768 ORTHO05D008436 6.5e-30 134.0 105 68.6
PGR044G1209 Punica granatum HOM05D006768 ORTHO05D008436 6.5e-30 134.0 110 64.5
Sed0001868 Sechium edule HOM05D006768 ORTHO05D008436 6.5e-30 134.0 105 62.9
Gohir.A05G233000 Gossypium hirsutum HOM05D006768 ORTHO05D008436 8.5e-30 133.7 109 69.7
THA.LOC104806813 Tarenaya hassleriana HOM05D006768 ORTHO05D008436 1.5e-29 132.9 109 68.8
Aqoxy6G00156 Aquilegia oxysepala HOM05D006768 ORTHO05D008436 1.9e-29 132.5 104 64.4
Glyma.14G163200 Glycine max HOM05D006768 ORTHO05D008436 1.9e-29 132.5 111 69.4
Gohir.D02G081200 Gossypium hirsutum HOM05D006768 ORTHO05D008436 1.9e-29 132.5 107 68.2
Gorai.005G090800 Gossypium raimondii HOM05D006768 ORTHO05D008436 2.5e-29 132.1 104 67.3
Duzib116G0009 Durio zibethinus HOM05D006768 ORTHO05D008436 3.2e-29 131.7 107 67.3
Gohir.D05G235400 Gossypium hirsutum HOM05D006768 ORTHO05D008436 3.2e-29 131.7 107 66.4
Glyma.13G082200 Glycine max HOM05D006768 ORTHO05D008436 4.2e-29 131.3 111 68.5
HanXRQChr16g0527071 Helianthus annuus HOM05D006768 ORTHO05D008436 5.5e-29 131.0 104 70.2
PSO170G4432 Papaver somniferum HOM05D006768 ORTHO05D008436 5.5e-29 131.0 105 66.7
PSO528G0064 Papaver somniferum HOM05D006768 ORTHO05D008436 5.5e-29 131.0 105 66.7
Lsat_1_v5_gn_4_25061 Lactuca sativa HOM05D006768 ORTHO05D008436 7.2e-29 130.6 107 70.1
Medtr5g059100 Medicago truncatula HOM05D006768 ORTHO05D008436 7.2e-29 130.6 106 69.8
Thecc.08G120600 Theobroma cacao HOM05D006768 ORTHO05D008436 9.4e-29 130.2 109 68.8
TPR.G8510 Trifolium pratense HOM05D006768 ORTHO05D008436 9.4e-29 130.2 109 65.1
MSTRG.25394 Avicennia marina HOM05D006768 ORTHO05D008436 1.2e-28 129.8 104 62.5
Nitab4.5_0005357g0030 Nicotiana tabacum HOM05D006768 ORTHO05D008436 1.2e-28 129.8 99 66.7
CsaV3_6G003570 Cucumis sativus L. HOM05D006768 ORTHO05D008436 1.6e-28 129.4 99 65.7
SalBow7G0914 Salvia bowleyana HOM05D006768 ORTHO05D008436 1.6e-28 129.4 98 65.3
SalBow7G4665 Salvia bowleyana HOM05D006768 ORTHO05D008436 1.6e-28 129.4 98 65.3
Cpa.g.sc36.24 Carica papaya HOM05D006768 ORTHO05D008436 2.7e-28 128.6 104 62.5
Cc10_g11060 Coffea canephora HOM05D006768 ORTHO05D008436 2.7e-28 128.6 99 70.7
Prupe.1G502600 Prunus persica HOM05D006768 ORTHO05D008436 4.7e-28 127.9 105 65.7
CSS0006116 Camellia sinensis var. sinensis HOM05D006768 ORTHO05D008436 6.1e-28 127.5 105 60.0
Gohir.A02G074000 Gossypium hirsutum HOM05D006768 ORTHO05D008436 6.1e-28 127.5 109 70.6
FAN15G1404 Fragaria x ananassa HOM05D006768 ORTHO05D008436 8.0e-28 127.1 99 68.7
TWI12G0503 Tripterygium wilfordii HOM05D006768 ORTHO05D008436 1.0e-27 126.7 105 64.8
Duzib041G0323 Durio zibethinus HOM05D006768 ORTHO05D008436 1.4e-27 126.3 109 67.0
ECA233G5727 Erigeron canadensis HOM05D006768 ORTHO05D008436 1.8e-27 125.9 104 65.4
VMungo0647G1658 Vigna mungo HOM05D006768 ORTHO05D008436 3.0e-27 125.2 107 68.2
HanXRQChr08g0223691 Helianthus annuus HOM05D006768 ORTHO05D008436 4.0e-27 124.8 106 67.9
Hma1.2p1_0073F.1_g038410 Hydrangea macrophylla HOM05D006768 ORTHO05D008436 1.1e-26 123.2 104 60.6
Sc23g0000800 Simmondsia chinensis HOM05D006768 ORTHO05D008436 1.1e-26 123.2 98 69.4
ECA234G1078 Erigeron canadensis HOM05D006768 ORTHO05D008436 1.5e-26 122.9 109 66.1
Dinv27347 Davidia involucrata HOM05D006768 ORTHO05D008436 7.5e-26 120.6 102 60.8
GSVIVG01008909001 Vitis vinifera HOM05D006768 ORTHO05D008436 7.5e-26 120.6 102 61.8
RhsimUnG0095400 Rhododendron simsii HOM05D006768 ORTHO05D008436 1.3e-25 119.8 101 61.4
QL09p036660 Quercus lobata HOM05D006768 ORTHO05D008436 2.2e-25 119.0 107 65.4
Os03g0263700 Oryza sativa ssp. japonica HOM05D006768 ORTHO05D008436 3.7e-25 118.2 109 63.3
TAR625G0411 Trochodendron aralioides HOM05D006768 ORTHO05D008436 8.2e-25 117.1 104 59.6
Sabra02G0068000 Salix brachista HOM05D006768 ORTHO05D008436 1.1e-24 116.7 102 65.7
HPP92_011177 Vanilla planifolia HOM05D006768 ORTHO05D008436 1.8e-24 115.9 105 63.8
Gorai.009G243700 Gossypium raimondii HOM05D006768 ORTHO05D008436 2.4e-24 115.5 102 61.8
vmacro00812 Vaccinium macrocarpon HOM05D006768 ORTHO05D008436 3.1e-24 115.2 106 60.4
TAR376G1039 Trochodendron aralioides HOM05D000018 ORTHO05D001920 7.0e-24 114.0 94 62.8
MBI06_g02573_MAGBIO Magnolia biondii HOM05D006768 ORTHO05D008436 2.0e-23 112.5 97 57.7
MD08G1168400 Malus domestica HOM05D006768 ORTHO05D008436 4.5e-23 111.3 89 70.8
SGA_v2.0_scaffold24G10479 Striga asiatica HOM05D006768 ORTHO05D008436 4.5e-23 111.3 105 53.3
Zm00001eb398080 Zea mays HOM05D006768 ORTHO05D008436 2.9e-22 108.6 112 55.4
Aa31LG9G14330 Aethionema arabicum HOM05D006768 ORTHO05D008436 5.0e-22 107.8 86 73.3
Haze_00489 Corylus avellana HOM05D006768 ORTHO05D008436 8.5e-22 107.1 83 71.1
Zm00001eb011610 Zea mays HOM05D006768 ORTHO05D008436 1.1e-21 106.7 112 56.2
Sabra05G0131800 Salix brachista HOM05D006768 ORTHO05D008436 7.2e-21 104.0 88 63.6
Ca_28007_v3 Cicer arietinum L. HOM05D006768 ORTHO05D008436 1.2e-20 103.2 82 73.2
FAN20G0213 Fragaria x ananassa HOM05D000048 ORTHO05D004674 1.2e-20 103.2 92 62.0
CDE08G1444 Ceratophyllum demersum HOM05D006768 ORTHO05D008436 2.1e-20 102.4 106 58.5
AUR62023633 Chenopodium quinoa HOM05D006768 ORTHO05D008436 2.1e-20 102.4 70 81.4
CDE04G1345 Ceratophyllum demersum HOM05D006768 ORTHO05D008436 2.7e-20 102.1 106 56.6
FAN27G1871 Fragaria x ananassa HOM05D000048 ORTHO05D004674 2.6e-18 95.5 57 80.7
Eucgr.F04346 Eucalyptus grandis HOM05D006768 ORTHO05D008436 7.5e-18 94.0 85 65.9
CSS0018251 Camellia sinensis var. sinensis HOM05D006768 ORTHO05D008436 9.8e-18 93.6 87 62.1
Peaxi162Scf00000g61010 Petunia axillaris HOM05D006768 ORTHO05D008436 2.0e-15 85.9 67 64.2
SEGI_37020 Sequoiadendron giganteum HOM05D006768 ORTHO05D008436 3.5e-15 85.1 105 51.4
Mapoly0043s0020 Marchantia polymorpha HOM05D006768 ORTHO05D008436 3.4e-10 68.6 122 36.9
Pp3c13_12030 Physcomitrium patens HOM05D006768 ORTHO05D008436 9.8e-10 67.0 101 42.6
Sabra05G0131600 Salix brachista HOM05D006768 ORTHO05D008436 1.8e-08 62.8 57 66.7
AagrBONN_evm.TU.Sc2ySwM_344.1603 Anthoceros agrestis HOM05D006768 ORTHO05D008436 5.4e-08 61.2 102 42.2
Nitab4.5_0001142g0120 Nicotiana tabacum HOM05D006768 ORTHO05D008436 2.0e-07 59.3 97 43.3
SMO308G0024 Selaginella moellendorffii HOM05D006768 ORTHO05D008436 3.5e-07 58.5 109 41.3
Nn1g08704 Nelumbo nucifera HOM05D006768 ORTHO05D008436 3.8e-06 55.1 58 53.4


User provided reference genes

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