Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB01g02833 Brassica carinata HOM05D003422 ORTHO05D004263 2.2e-55 218.8 113 100.0
BcaC02g10230 Brassica carinata HOM05D003422 ORTHO05D004263 2.3e-25 119.0 115 62.6
BcaC03g15214 Brassica carinata HOM05D003422 ORTHO05D004263 6.6e-20 100.9 85 68.2
C02p28010 Brassica napus HOM05D003422 ORTHO05D004263 6.6e-20 100.9 85 68.2
BolC2t08844H Brassica oleracea HOM05D003422 ORTHO05D004263 6.6e-20 100.9 85 68.2
BcaC08g45809 Brassica carinata HOM05D003422 ORTHO05D004263 8.6e-20 100.5 85 69.4
C06p36020 Brassica napus HOM05D003422 ORTHO05D004263 8.6e-20 100.5 85 69.4
BolC6t38723H Brassica oleracea HOM05D003422 ORTHO05D004263 8.6e-20 100.5 85 69.4
BraA02t06729Z Brassica rapa HOM05D003422 ORTHO05D004263 8.6e-20 100.5 85 68.2
BcaB05g24600 Brassica carinata HOM05D003422 ORTHO05D004263 1.1e-19 100.1 85 68.2
Sp5g25830 Schrenkiella parvula HOM05D003422 ORTHO05D004263 1.1e-19 100.1 85 68.2
BcaB03g15550 Brassica carinata HOM05D003422 ORTHO05D004263 2.5e-19 99.0 85 68.2
A07p31020 Brassica napus HOM05D003422 ORTHO05D004263 4.3e-19 98.2 85 68.2
A02p16750 Brassica napus HOM05D003422 ORTHO05D004263 9.5e-19 97.1 85 65.9
BcaB01g03637 Brassica carinata HOM05D003422 ORTHO05D004263 1.2e-18 96.7 88 67.0
Aa31LG7G7310 Aethionema arabicum HOM05D003422 ORTHO05D004263 2.8e-18 95.5 84 66.7
Cc11_g15770 Coffea canephora HOM05D003422 ORTHO05D004263 1.1e-17 93.6 84 64.3
Lsat_1_v5_gn_8_152261 Lactuca sativa HOM05D003422 ORTHO05D004263 1.1e-17 93.6 84 64.3
Actinidia15098 Actinidia chinensis HOM05D003422 ORTHO05D004263 1.4e-17 93.2 84 64.3
HanXRQChr06g0172831 Helianthus annuus HOM05D003422 ORTHO05D004263 1.4e-17 93.2 85 63.5
VMungo1127G0899 Vigna mungo HOM05D003422 ORTHO05D004263 1.4e-17 93.2 84 65.5
arahy.Tifrunner.gnm1.ann1.G4VR7T Arachis hypogaea HOM05D003422 ORTHO05D004263 1.8e-17 92.8 84 65.5
arahy.Tifrunner.gnm1.ann1.FFB06F Arachis hypogaea HOM05D003422 ORTHO05D004263 2.3e-17 92.4 84 65.5
BolC4t24676H Brassica oleracea HOM05D003422 ORTHO05D004263 2.3e-17 92.4 69 71.0
Migut.E00204 Erythranthe guttata HOM05D003422 ORTHO05D004263 2.3e-17 92.4 84 65.5
THA.LOC104822989 Tarenaya hassleriana HOM05D003422 ORTHO05D004263 2.3e-17 92.4 78 67.9
CSS0036067 Camellia sinensis var. sinensis HOM05D003422 ORTHO05D004263 3.1e-17 92.0 84 63.1
CARHR023720 Cardamine hirsuta HOM05D003422 ORTHO05D004263 3.1e-17 92.0 85 63.5
Atru.chr2.1587 Acer truncatum HOM05D003422 ORTHO05D004263 4.0e-17 91.7 84 63.1
arahy.Tifrunner.gnm1.ann1.I3QT17 Arachis hypogaea HOM05D003422 ORTHO05D004263 4.0e-17 91.7 84 64.3
CAN.G158.25 Capsicum annuum HOM05D003422 ORTHO05D004263 4.0e-17 91.7 84 63.1
Nitab4.5_0016963g0010 Nicotiana tabacum HOM05D003422 ORTHO05D004263 4.0e-17 91.7 84 64.3
Atru.chr3.1559 Acer truncatum HOM05D003422 ORTHO05D004263 5.2e-17 91.3 84 63.1
Atru.chr3.1581 Acer truncatum HOM05D003422 ORTHO05D004263 5.2e-17 91.3 84 63.1
Peaxi162Scf00128g00219 Petunia axillaris HOM05D003422 ORTHO05D004263 5.2e-17 91.3 84 64.3
RcHm_v2.0_Chr4g0433011 Rosa chinensis HOM05D003422 ORTHO05D004263 5.2e-17 91.3 84 64.3
Solyc01g005810.3 Solanum lycopersicum HOM05D003422 ORTHO05D004263 5.2e-17 91.3 84 64.3
Sopen01g001810 Solanum pennellii HOM05D003422 ORTHO05D004263 5.2e-17 91.3 84 64.3
PGSC0003DMG400032131 Solanum tuberosum HOM05D003422 ORTHO05D004263 5.2e-17 91.3 84 64.3
Lsat_1_v5_gn_5_166341 Lactuca sativa HOM05D003422 ORTHO05D004263 6.8e-17 90.9 84 61.9
MD11G1214400 Malus domestica HOM05D003422 ORTHO05D004263 6.8e-17 90.9 84 63.1
TAR622G0502 Trochodendron aralioides HOM05D003422 ORTHO05D004263 6.8e-17 90.9 84 63.1
GSVIVG01007655001 Vitis vinifera HOM05D003422 ORTHO05D004263 6.8e-17 90.9 79 65.8
GSVIVG01021879001 Vitis vinifera HOM05D003422 ORTHO05D004263 6.8e-17 90.9 79 65.8
BcaB07g33435 Brassica carinata HOM05D003422 ORTHO05D004263 8.9e-17 90.5 93 60.2
SpUn0343_0020 Schrenkiella parvula HOM05D003422 ORTHO05D004263 8.9e-17 90.5 84 61.9
MD03G1198200 Malus domestica HOM05D003422 ORTHO05D004263 1.2e-16 90.1 84 63.1
Thhalv10008312m.g Eutrema salsugineum HOM05D003422 ORTHO05D004263 1.5e-16 89.7 84 63.1
Hma1.2p1_3343F.1_g335440 Hydrangea macrophylla HOM05D003422 ORTHO05D004263 1.5e-16 89.7 84 63.1
Nitab4.5_0009109g0040 Nicotiana tabacum HOM05D003422 ORTHO05D004263 1.5e-16 89.7 84 63.1
Hund06028 Selenicereus undatus HOM05D003422 ORTHO05D004263 2.6e-16 89.0 84 61.9
Sc14g0008740 Simmondsia chinensis HOM05D003422 ORTHO05D004263 2.6e-16 89.0 84 63.1
MELO3C017744.2 Cucumis melo HOM05D003422 ORTHO05D004263 3.4e-16 88.6 84 61.9
Pp3c2_4220 Physcomitrium patens HOM05D003422 ORTHO05D004263 3.4e-16 88.6 85 61.2
Sed0010066 Sechium edule HOM05D003422 ORTHO05D004263 3.4e-16 88.6 84 61.9
Sed0026406 Sechium edule HOM05D003422 ORTHO05D004263 3.4e-16 88.6 84 61.9
SEGI_07600 Sequoiadendron giganteum HOM05D003422 ORTHO05D004263 3.4e-16 88.6 84 61.9
BcaB04g17046 Brassica carinata HOM05D003422 ORTHO05D004263 4.4e-16 88.2 81 65.4
ClCG07G015410 Citrullus lanatus HOM05D003422 ORTHO05D004263 4.4e-16 88.2 84 61.9
Dinv15231 Davidia involucrata HOM05D003422 ORTHO05D004263 4.4e-16 88.2 79 64.6
AT1G23280 Arabidopsis thaliana HOM05D003422 ORTHO05D004263 5.8e-16 87.8 85 62.4
Carub.0001s2287 Capsella rubella HOM05D003422 ORTHO05D004263 5.8e-16 87.8 85 61.2
CsaV3_4G003000 Cucumis sativus L. HOM05D003422 ORTHO05D004263 7.5e-16 87.4 84 60.7
FAN06G1621 Fragaria x ananassa HOM05D003422 ORTHO05D004263 7.5e-16 87.4 84 61.9
Nitab4.5_0001565g0060 Nicotiana tabacum HOM05D003422 ORTHO05D004263 7.5e-16 87.4 84 61.9
Glyma.12G119800 Glycine max HOM05D003422 ORTHO05D004263 9.8e-16 87.0 78 65.4
Manes.13G024200 Manihot esculenta HOM05D003422 ORTHO05D004263 9.8e-16 87.0 84 63.1
Glyma.06G286100 Glycine max HOM05D003422 ORTHO05D004263 1.3e-15 86.7 78 65.4
Phvul.010G035100 Phaseolus vulgaris HOM05D003422 ORTHO05D004263 1.3e-15 86.7 77 66.2
Phvul.011G000100 Phaseolus vulgaris HOM05D003422 ORTHO05D004263 1.3e-15 86.7 77 66.2
Lalb_Chr10g0099861 Lupinus albus HOM05D003422 ORTHO05D004263 1.7e-15 86.3 78 64.1
Oeu041425.1 Olea europaea HOM05D003422 ORTHO05D004263 1.7e-15 86.3 78 64.1
PGR102G0689 Punica granatum HOM05D003422 ORTHO05D004263 1.7e-15 86.3 84 60.7
Aqoxy5G03760 Aquilegia oxysepala HOM05D003422 ORTHO05D004263 2.9e-15 85.5 84 60.7
Cpa.g.sc33.23 Carica papaya HOM05D003422 ORTHO05D004263 2.9e-15 85.5 79 63.3
Lalb_Chr04g0254851 Lupinus albus HOM05D003422 ORTHO05D004263 2.9e-15 85.5 77 64.9
Nn8g39875 Nelumbo nucifera HOM05D003422 ORTHO05D004263 2.9e-15 85.5 79 63.3
PSO017G5618 Papaver somniferum HOM05D003422 ORTHO05D004263 2.9e-15 85.5 86 58.1
Ciclev10032237m.g Citrus clementina HOM05D003422 ORTHO05D004263 3.7e-15 85.1 79 62.0
Prupe.8G011700 Prunus persica HOM05D003422 ORTHO05D004263 3.7e-15 85.1 78 62.8
Nn2g13933 Nelumbo nucifera HOM05D003422 ORTHO05D004263 4.9e-15 84.7 78 62.8
Nn8g40815 Nelumbo nucifera HOM05D003422 ORTHO05D004263 4.9e-15 84.7 78 62.8
Prupe.1G244800 Prunus persica HOM05D003422 ORTHO05D004263 4.9e-15 84.7 78 62.8
Prupe.8G016700 Prunus persica HOM05D003422 ORTHO05D004263 4.9e-15 84.7 78 62.8
TAR374G1409 Trochodendron aralioides HOM05D003422 ORTHO05D004263 4.9e-15 84.7 79 62.0
A03p43080 Brassica napus HOM05D003422 ORTHO05D004263 6.4e-15 84.3 85 58.8
Eucgr.B00992 Eucalyptus grandis HOM05D003422 ORTHO05D004263 6.4e-15 84.3 77 63.6
Eucgr.K00985 Eucalyptus grandis HOM05D003422 ORTHO05D004263 6.4e-15 84.3 77 63.6
TPR.G28314 Trifolium pratense HOM05D003422 ORTHO05D004263 6.4e-15 84.3 84 60.7
CANSAT64G0467 Cannabis sativa HOM05D003422 ORTHO05D004263 8.3e-15 84.0 77 63.6
QL03p061510 Quercus lobata HOM05D003422 ORTHO05D004263 8.3e-15 84.0 77 63.6
QL03p058012 Quercus lobata HOM05D003422 ORTHO05D004263 1.4e-14 83.2 77 62.3
RcHm_v2.0_Chr7g0190541 Rosa chinensis HOM05D003422 ORTHO05D004263 1.4e-14 83.2 84 60.7
CiPaw.05G181800 Carya illinoinensis HOM05D003422 ORTHO05D004263 1.9e-14 82.8 76 63.2
Dinv38208 Davidia involucrata HOM05D003422 ORTHO05D004263 1.9e-14 82.8 78 61.5
FvH4_4g25580 Fragaria vesca HOM05D003422 ORTHO05D004263 1.9e-14 82.8 78 62.8
Cfa009213 Carpinus fangiana HOM05D003422 ORTHO05D004263 2.4e-14 82.4 76 63.2
Cfa012129 Carpinus fangiana HOM05D003422 ORTHO05D004263 2.4e-14 82.4 76 63.2
Haze_08919 Corylus avellana HOM05D003422 ORTHO05D004263 2.4e-14 82.4 76 63.2
Haze_12250 Corylus avellana HOM05D003422 ORTHO05D004263 2.4e-14 82.4 76 63.2
SGA_v2.0_scaffold63G21735 Striga asiatica HOM05D003637 ORTHO05D004175 2.4e-14 82.4 77 63.6
SGA_v2.0_scaffold87G27078 Striga asiatica HOM05D003637 ORTHO05D004175 2.4e-14 82.4 77 63.6
CiPaw.05G159400 Carya illinoinensis HOM05D003422 ORTHO05D004263 4.1e-14 81.6 76 61.8
FAN17G2514 Fragaria x ananassa HOM05D003422 ORTHO05D004263 4.1e-14 81.6 78 62.8
COL.COLO4_05559 Corchorus olitorius HOM05D003422 ORTHO05D004263 5.4e-14 81.3 76 63.2
ATR0824G091 Amborella trichopoda HOM05D003422 ORTHO05D004263 7.0e-14 80.9 84 58.3
Gohir.A12G199400 Gossypium hirsutum HOM05D003422 ORTHO05D004263 7.0e-14 80.9 76 63.2
Gohir.D12G202200 Gossypium hirsutum HOM05D003422 ORTHO05D004263 7.0e-14 80.9 76 63.2
Gorai.008G217200 Gossypium raimondii HOM05D003422 ORTHO05D004263 7.0e-14 80.9 76 63.2
Psat7g167080 Pisum sativum HOM05D003422 ORTHO05D004263 7.0e-14 80.9 78 61.5
AL1G31870 Arabidopsis lyrata HOM05D003422 ORTHO05D004263 9.2e-14 80.5 84 59.5
ECA233G3049 Erigeron canadensis HOM05D003422 ORTHO05D004263 9.2e-14 80.5 76 60.5
TWI23G0208 Tripterygium wilfordii HOM05D003422 ORTHO05D004263 9.2e-14 80.5 76 61.8
TWI39G0719 Tripterygium wilfordii HOM05D003422 ORTHO05D004263 9.2e-14 80.5 76 61.8
Eucgr.K01009 Eucalyptus grandis HOM05D003422 ORTHO05D004263 1.2e-13 80.1 76 60.5
FAN07G0682 Fragaria x ananassa HOM05D003422 ORTHO05D004263 1.2e-13 80.1 78 61.5
FAN22G1899 Fragaria x ananassa HOM05D003422 ORTHO05D004263 1.2e-13 80.1 78 61.5
PSO478G1628 Papaver somniferum HOM05D003422 ORTHO05D004263 1.2e-13 80.1 85 55.3
TPR.G37166 Trifolium pratense HOM05D003422 ORTHO05D004263 1.2e-13 80.1 84 59.5
PSO017G4826 Papaver somniferum HOM05D003422 ORTHO05D004263 1.6e-13 79.7 85 55.3
Sabra15G0107000 Salix brachista HOM05D003422 ORTHO05D004263 1.6e-13 79.7 77 62.3
BcaC01g03409 Brassica carinata HOM05D003422 ORTHO05D004263 2.0e-13 79.3 86 58.1
C03p52870 Brassica napus HOM05D003422 ORTHO05D004263 2.0e-13 79.3 86 58.1
Lj1g0018398 Lotus japonicus HOM05D003422 ORTHO05D004263 2.0e-13 79.3 76 63.2
Mapoly0061s0104 Marchantia polymorpha HOM05D003422 ORTHO05D004263 2.0e-13 79.3 84 54.8
HPP92_014432 Vanilla planifolia HOM05D003422 ORTHO05D004263 2.0e-13 79.3 78 59.0
BraA03t13450Z Brassica rapa HOM05D003422 ORTHO05D004263 2.7e-13 79.0 88 56.8
Potri.012G085300 Populus trichocarpa HOM05D003422 ORTHO05D004263 2.7e-13 79.0 77 62.3
Potri.015G083700 Populus trichocarpa HOM05D003422 ORTHO05D004263 2.7e-13 79.0 77 62.3
BolC3t17554H Brassica oleracea HOM05D003422 ORTHO05D004263 3.5e-13 78.6 88 56.8
Duzib068G0444 Durio zibethinus HOM05D003422 ORTHO05D004263 3.5e-13 78.6 76 60.5
Thecc.03G025100 Theobroma cacao HOM05D003422 ORTHO05D004263 3.5e-13 78.6 76 61.8
DCAR_026512 Daucus carota HOM05D003422 ORTHO05D004263 4.6e-13 78.2 87 55.2
BcaC09g49229 Brassica carinata HOM05D003422 ORTHO05D004263 7.8e-13 77.4 83 55.4
unitig_21.g20608 Utricularia gibba HOM05D003422 ORTHO05D004263 7.8e-13 77.4 76 60.5
Ca_20120_v3 Cicer arietinum L. HOM05D003422 ORTHO05D004263 2.3e-12 75.9 76 59.2
Os07g0270900 Oryza sativa ssp. japonica HOM05D003422 ORTHO05D004263 5.0e-12 74.7 87 50.6
Zm00001eb364260 Zea mays HOM05D003422 ORTHO05D004263 6.6e-12 74.3 87 49.4
AL1G37060 Arabidopsis lyrata HOM05D003422 ORTHO05D004263 8.6e-12 73.9 84 56.0
A01p32170 Brassica napus HOM05D003422 ORTHO05D004263 8.6e-12 73.9 85 55.3
Medtr2g103560 Medicago truncatula HOM05D003422 ORTHO05D004263 8.6e-12 73.9 76 59.2
Rhsim02G0001300 Rhododendron simsii HOM05D003422 ORTHO05D004263 1.5e-11 73.2 121 44.6
SMO331G0073 Selaginella moellendorffii HOM05D003422 ORTHO05D004263 2.5e-11 72.4 79 53.2
CDE02G2608 Ceratophyllum demersum HOM05D003422 ORTHO05D004263 4.3e-11 71.6 76 53.9
ATR0996G003 Amborella trichopoda HOM05D003422 ORTHO05D004263 1.2e-10 70.1 83 50.6
Actinidia27808 Actinidia chinensis HOM05D003422 ORTHO05D004263 2.1e-10 69.3 86 55.8
Rhsim12G0110100 Rhododendron simsii HOM05D003422 ORTHO05D004263 2.8e-10 68.9 119 42.9
BraA01t03342Z Brassica rapa HOM05D003422 ORTHO05D004263 6.2e-10 67.8 87 51.7
Eucgr.B00881 Eucalyptus grandis HOM05D003422 ORTHO05D004263 6.2e-10 67.8 67 61.2
CBR_g32274 Chara braunii HOM05D003422 ORTHO05D004263 1.1e-09 67.0 77 49.4
Nitab4.5_0000979g0040 Nicotiana tabacum HOM05D003422 ORTHO05D004263 4.0e-09 65.1 62 61.3
Rhsim06G0078600 Rhododendron simsii HOM05D003422 ORTHO05D004263 4.0e-09 65.1 65 60.0
SEGI_01875 Sequoiadendron giganteum HOM05D003422 ORTHO05D004263 6.8e-09 64.3 60 61.7
PRCOL_00004566 Prasinoderma coloniale HOM05D003422 ORTHO05D004263 1.2e-08 63.5 85 45.9
Sabra12G0061400 Salix brachista HOM05D003422 ORTHO05D004263 9.9e-08 60.5 109 43.1
Cre02.g145231 Chlamydomonas reinhardtii HOM05D003422 ORTHO05D004263 6.4e-07 57.8 90 40.0
Medtr4g079190 Medicago truncatula HOM05D003422 ORTHO05D004263 1.1e-06 57.0 76 46.1
Actinidia01349 Actinidia chinensis HOM05D003422 ORTHO05D004263 1.9e-06 56.2 76 46.1
Cfa026988 Carpinus fangiana HOM05D003422 ORTHO05D004263 2.4e-06 55.8 90 38.9
CDE05G1364 Ceratophyllum demersum HOM05D003422 ORTHO05D004263 7.1e-06 54.3 64 46.9


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