Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB01g02588 Brassica carinata HOM05D000471 ORTHO05D032104 1.9e-46 188.7 91 100.0
BcaC09g49435 Brassica carinata HOM05D000471 ORTHO05D032104 5.6e-30 134.0 83 78.3
BcaB05g22042 Brassica carinata HOM05D000353 ORTHO05D000199 1.8e-23 112.5 54 96.3
BcaC08g44529 Brassica carinata HOM05D000471 ORTHO05D000199 2.5e-22 108.6 60 80.0
BcaC03g14923 Brassica carinata HOM05D000471 ORTHO05D000199 4.3e-22 107.8 60 80.0
BolC4t25974H Brassica oleracea HOM05D000471 ORTHO05D032104 1.1e-17 93.2 60 73.3
BolC7t43190H Brassica oleracea HOM05D000471 ORTHO05D000199 1.4e-15 86.3 60 63.3
BolC6t35321H Brassica oleracea HOM05D000471 ORTHO05D000199 2.3e-15 85.5 78 59.0
BolC9t55485H Brassica oleracea HOM05D000471 ORTHO05D000199 3.0e-15 85.1 40 92.5
C01p32360 Brassica napus HOM05D000471 ORTHO05D000199 2.5e-14 82.0 77 57.1
BcaC03g14394 Brassica carinata HOM05D000471 ORTHO05D000199 3.3e-14 81.6 39 89.7
BcaC04g23286 Brassica carinata HOM05D000471 ORTHO05D000199 3.3e-14 81.6 39 89.7
BolC1t00982H Brassica oleracea HOM05D000471 ORTHO05D000199 3.3e-14 81.6 39 89.7
BolC1t02994H Brassica oleracea HOM05D000471 ORTHO05D000199 3.3e-14 81.6 39 89.7
BolC2t11101H Brassica oleracea HOM05D000471 ORTHO05D000199 3.3e-14 81.6 39 89.7
BolC4t26559H Brassica oleracea HOM05D000471 ORTHO05D000199 2.2e-13 79.0 76 57.9
BolC4t23190H Brassica oleracea HOM05D000471 ORTHO05D000199 6.3e-13 77.4 59 59.3
BolC9t56431H Brassica oleracea HOM05D000471 ORTHO05D000199 8.2e-13 77.0 66 56.1
BcaC05g28165 Brassica carinata HOM05D000471 ORTHO05D093577 1.0e-10 70.1 79 45.6
BolC4t23368H Brassica oleracea HOM05D000471 ORTHO05D000199 1.3e-10 69.7 39 79.5
BolC6t38315H Brassica oleracea HOM05D000471 ORTHO05D000199 1.3e-10 69.7 39 74.4
BolC9t55686H Brassica oleracea HOM05D000471 ORTHO05D000199 1.7e-10 69.3 39 76.9
BcaC02g09161 Brassica carinata HOM05D000471 ORTHO05D000199 2.2e-10 68.9 56 64.3
BcaC04g20428 Brassica carinata HOM05D000471 ORTHO05D000199 2.9e-10 68.6 63 58.7
BolC1t02540H Brassica oleracea HOM05D000471 ORTHO05D000199 3.8e-10 68.2 39 74.4
BolC3t19089H Brassica oleracea HOM05D000471 ORTHO05D000199 3.8e-10 68.2 39 74.4
BolC5t30742H Brassica oleracea HOM05D000471 ORTHO05D000199 3.8e-10 68.2 39 74.4
BolC6t35529H Brassica oleracea HOM05D000471 ORTHO05D000199 3.8e-10 68.2 39 74.4
BolC7t41823H Brassica oleracea HOM05D000471 ORTHO05D000199 3.8e-10 68.2 39 74.4
BolC8t47965H Brassica oleracea HOM05D000471 ORTHO05D000199 3.8e-10 68.2 39 74.4
BolC9t56468H Brassica oleracea HOM05D000471 ORTHO05D000199 3.8e-10 68.2 39 74.4
BolC9t58182H Brassica oleracea HOM05D000471 ORTHO05D000199 3.8e-10 68.2 39 74.4
BolC5t31893H Brassica oleracea HOM05D000471 ORTHO05D000199 5.0e-10 67.8 39 71.8
BolC7t41755H Brassica oleracea HOM05D000471 ORTHO05D000199 5.0e-10 67.8 49 63.3
BolC8t48158H Brassica oleracea HOM05D000471 ORTHO05D000199 5.0e-10 67.8 39 74.4
BcaC08g44391 Brassica carinata HOM05D000471 ORTHO05D000199 6.5e-10 67.4 32 90.6
BolC8t47213H Brassica oleracea HOM05D000471 ORTHO05D000199 6.5e-10 67.4 75 50.7
BcaC08g44729 Brassica carinata HOM05D000471 ORTHO05D000199 8.5e-10 67.0 35 85.7
BcaC05g26374 Brassica carinata HOM05D000471 ORTHO05D000199 1.1e-09 66.6 32 90.6
BolC1t03649H Brassica oleracea HOM05D000471 ORTHO05D000199 1.1e-09 66.6 39 71.8
BolC7t42770H Brassica oleracea HOM05D000471 ORTHO05D000199 1.4e-09 66.2 50 62.0
BolC6t39382H Brassica oleracea HOM05D000471 ORTHO05D000199 1.9e-09 65.9 39 71.8
C09p44380 Brassica napus HOM05D000471 ORTHO05D000199 2.5e-09 65.5 42 66.7
BolC8t46987H Brassica oleracea HOM05D000471 ORTHO05D000199 2.5e-09 65.5 39 71.8
C05p23290 Brassica napus HOM05D000471 ORTHO05D000199 3.2e-09 65.1 39 71.8
BraA05t21209Z Brassica rapa HOM05D000471 ORTHO05D000199 4.2e-09 64.7 38 76.3
BolC8t49704H Brassica oleracea HOM05D000471 ORTHO05D000199 5.5e-09 64.3 38 73.7
BolC5t33743H Brassica oleracea HOM05D000471 ORTHO05D000199 9.4e-09 63.5 67 52.2
BolC7t43513H Brassica oleracea HOM05D000471 ORTHO05D000199 9.4e-09 63.5 38 71.1
BolC9t58412H Brassica oleracea HOM05D000471 ORTHO05D000199 9.4e-09 63.5 37 73.0
BolC2t11172H Brassica oleracea HOM05D000471 ORTHO05D000199 1.2e-08 63.2 39 69.2
BolC1t01861H Brassica oleracea HOM05D000471 ORTHO05D000199 2.1e-08 62.4 39 69.2
BolC2t09493H Brassica oleracea HOM05D000471 ORTHO05D000199 2.1e-08 62.4 39 69.2
C05p32520 Brassica napus HOM05D000471 ORTHO05D000199 3.6e-08 61.6 40 77.5
C05p33730 Brassica napus HOM05D000471 ORTHO05D000199 3.6e-08 61.6 40 77.5
C08p08800 Brassica napus HOM05D000471 ORTHO05D000199 3.6e-08 61.6 40 77.5
C09p09790 Brassica napus HOM05D000471 ORTHO05D000199 3.6e-08 61.6 40 77.5
BolC6t36870H Brassica oleracea HOM05D000471 ORTHO05D000199 3.6e-08 61.6 40 77.5
BraA02t07702Z Brassica rapa HOM05D000471 ORTHO05D000199 3.6e-08 61.6 42 61.9
BraSC36t46070Z Brassica rapa HOM05D000471 ORTHO05D000199 3.6e-08 61.6 40 77.5
BolC4t24613H Brassica oleracea HOM05D000471 ORTHO05D000199 4.7e-08 61.2 37 70.3
BolC5t32942H Brassica oleracea HOM05D000471 ORTHO05D000199 6.1e-08 60.8 40 75.0
BcaB01g01272 Brassica carinata HOM05D000471 ORTHO05D000199 7.9e-08 60.5 37 75.7
BcaC08g44259 Brassica carinata HOM05D000471 ORTHO05D000199 1.0e-07 60.1 40 75.0
BraA04t16632Z Brassica rapa HOM05D000471 ORTHO05D000199 1.0e-07 60.1 40 75.0
BolC5t32454H Brassica oleracea HOM05D000471 ORTHO05D000199 1.8e-07 59.3 41 65.9
C06p17040 Brassica napus HOM05D000471 ORTHO05D024295 2.3e-07 58.9 41 63.4
Sp1g30760 Schrenkiella parvula HOM05D000471 ORTHO05D000199 2.3e-07 58.9 41 61.0
A09p19790 Brassica napus HOM05D000471 ORTHO05D000199 3.0e-07 58.5 40 72.5
BcaC04g19770 Brassica carinata HOM05D000471 ORTHO05D000199 3.9e-07 58.2 68 55.9
C06p05070 Brassica napus HOM05D000471 ORTHO05D000199 3.9e-07 58.2 40 72.5
BcaC04g21661 Brassica carinata HOM05D000471 ORTHO05D000199 5.1e-07 57.8 32 78.1
BcaC07g40689 Brassica carinata HOM05D000471 ORTHO05D000199 6.7e-07 57.4 29 82.8
C06p05730 Brassica napus HOM05D000471 ORTHO05D000199 1.1e-06 56.6 34 67.6
BolC9t55586H Brassica oleracea HOM05D000471 ORTHO05D000199 2.0e-06 55.8 33 69.7
BolC9t56743H Brassica oleracea HOM05D000471 ORTHO05D000199 2.0e-06 55.8 45 55.6
Sp7g08630 Schrenkiella parvula HOM05D000471 ORTHO05D000199 2.0e-06 55.8 39 64.1
C09p27730 Brassica napus HOM05D000471 ORTHO05D000199 2.6e-06 55.5 39 71.8
C01p34400 Brassica napus HOM05D000471 ORTHO05D000199 3.3e-06 55.1 42 61.9
C02p47380 Brassica napus HOM05D000471 ORTHO05D000199 3.3e-06 55.1 41 53.7
C03p66080 Brassica napus HOM05D000471 ORTHO05D000199 3.3e-06 55.1 41 53.7
C05p35620 Brassica napus HOM05D000471 ORTHO05D000199 3.3e-06 55.1 41 61.0
C06p16640 Brassica napus HOM05D000471 ORTHO05D000199 3.3e-06 55.1 41 53.7
BolC1t03410H Brassica oleracea HOM05D000471 ORTHO05D000199 3.3e-06 55.1 42 61.9
BolC2t10781H Brassica oleracea HOM05D000471 ORTHO05D000199 3.3e-06 55.1 41 53.7
BolC5t32887H Brassica oleracea HOM05D000471 ORTHO05D000199 3.3e-06 55.1 41 53.7
BolC7t40553H Brassica oleracea HOM05D000471 ORTHO05D000199 3.3e-06 55.1 41 53.7
BolC9t54977H Brassica oleracea HOM05D000471 ORTHO05D000199 3.3e-06 55.1 41 53.7
BraSC35t46011Z Brassica rapa HOM05D000471 ORTHO05D000199 3.3e-06 55.1 41 53.7
BraA09t38319Z Brassica rapa HOM05D000471 ORTHO05D000199 4.4e-06 54.7 46 52.2
Sp6g10920 Schrenkiella parvula HOM05D000471 ORTHO05D000199 5.7e-06 54.3 41 53.7
C04p30610 Brassica napus HOM05D000471 ORTHO05D000199 7.4e-06 53.9 41 53.7
BolC2t09359H Brassica oleracea HOM05D000471 ORTHO05D000199 7.4e-06 53.9 40 62.5
Sp6g12000 Schrenkiella parvula HOM05D000471 ORTHO05D000199 7.4e-06 53.9 36 63.9
SpUn0008_0040 Schrenkiella parvula HOM05D000471 ORTHO05D011337 9.7e-06 53.5 41 53.7


User provided reference genes

Program Settings