Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB01g02553 Brassica carinata HOM05D007540 ORTHO05D009531 1.2e-73 279.6 136 100.0
BcaB01g02546 Brassica carinata HOM05D007540 ORTHO05D009531 1.7e-59 232.6 136 86.0
BcaB01g04016 Brassica carinata HOM05D007540 ORTHO05D009531 2.6e-47 192.2 136 75.7
BcaB01g04012 Brassica carinata HOM05D007540 ORTHO05D009531 4.9e-46 188.0 136 74.3
BcaB01g04013 Brassica carinata HOM05D007540 ORTHO05D009531 4.9e-46 188.0 136 74.3
BcaB01g04014 Brassica carinata HOM05D007540 ORTHO05D009531 4.9e-46 188.0 136 74.3
BcaB01g04017 Brassica carinata HOM05D007540 ORTHO05D009531 4.9e-46 188.0 136 74.3
BcaB01g04015 Brassica carinata HOM05D007540 ORTHO05D009531 1.1e-45 186.8 139 74.1
BcaB04g16944 Brassica carinata HOM05D007540 ORTHO05D009531 2.1e-44 182.6 136 71.3
Carub.0005s1237 Capsella rubella HOM05D007540 ORTHO05D009531 6.0e-44 181.0 136 70.6
Carub.0007s3751 Capsella rubella HOM05D007540 ORTHO05D009531 1.0e-43 180.3 136 69.9
Carub.0007s3756 Capsella rubella HOM05D007540 ORTHO05D009531 3.0e-43 178.7 136 69.9
Carub.0007s3755 Capsella rubella HOM05D007540 ORTHO05D009531 3.9e-43 178.3 138 71.0
Carub.0001s3826 Capsella rubella HOM05D007540 ORTHO05D009531 7.4e-42 174.1 133 68.4
Carub.0005s0981 Capsella rubella HOM05D007540 ORTHO05D009531 1.4e-40 169.9 136 64.7
Carub.0007s3749 Capsella rubella HOM05D007540 ORTHO05D009531 1.8e-40 169.5 136 65.4
Carub.0002s0328 Capsella rubella HOM05D007540 ORTHO05D009531 3.1e-40 168.7 136 66.9
Carub.0007s3246 Capsella rubella HOM05D007540 ORTHO05D009531 9.0e-40 167.2 136 64.0
Carub.0002s0833 Capsella rubella HOM05D007540 ORTHO05D009531 4.5e-39 164.9 136 64.7
Carub.0007s3748 Capsella rubella HOM05D007540 ORTHO05D009531 4.5e-39 164.9 136 64.0
Carub.0003s3277 Capsella rubella HOM05D007540 ORTHO05D009531 1.3e-38 163.3 136 62.5
CANSAT35G1587 Cannabis sativa HOM05D007540 ORTHO05D009531 3.8e-38 161.8 135 61.5
Carub.0003s3276 Capsella rubella HOM05D007540 ORTHO05D009531 8.4e-38 160.6 136 61.8
Carub.0004s0563 Capsella rubella HOM05D007540 ORTHO05D009531 1.1e-37 160.2 136 61.8
Carub.0007s3754 Capsella rubella HOM05D007540 ORTHO05D009531 1.1e-37 160.2 136 63.2
AT1G66100 Arabidopsis thaliana HOM05D007540 ORTHO05D009531 1.9e-37 159.5 136 64.0
Carub.0007s3736 Capsella rubella HOM05D007540 ORTHO05D009531 2.7e-36 155.6 136 60.3
Carub.0003s1043 Capsella rubella HOM05D007540 ORTHO05D009531 1.0e-35 153.7 136 61.0
Carub.0003s3278 Capsella rubella HOM05D007540 ORTHO05D009531 1.0e-35 153.7 136 59.6
Carub.0003s3275 Capsella rubella HOM05D007540 ORTHO05D009531 3.0e-35 152.1 136 58.1
CARHR085700 Cardamine hirsuta HOM05D007540 ORTHO05D009531 1.1e-34 150.2 137 62.8
CARHR085710 Cardamine hirsuta HOM05D007540 ORTHO05D009531 2.5e-34 149.1 138 63.8
CANSAT25G2830 Cannabis sativa HOM05D007540 ORTHO05D009531 3.3e-34 148.7 133 60.9
AT5G36910 Arabidopsis thaliana HOM05D007540 ORTHO05D009531 7.4e-34 147.5 136 59.6
CARHR085180 Cardamine hirsuta HOM05D007540 ORTHO05D009531 9.6e-34 147.1 137 56.2
CANSAT25G1121 Cannabis sativa HOM05D007540 ORTHO05D009531 2.1e-33 146.0 133 59.4
CANSAT25G3055 Cannabis sativa HOM05D007540 ORTHO05D009531 2.1e-33 146.0 133 60.2
AL7G45500 Arabidopsis lyrata HOM05D007540 ORTHO05D009531 3.7e-33 145.2 137 58.4
A03p36900 Brassica napus HOM05D007540 ORTHO05D009531 4.8e-33 144.8 137 56.9
BraA03t12853Z Brassica rapa HOM05D007540 ORTHO05D009531 4.8e-33 144.8 137 56.9
Carub.0006s2979 Capsella rubella HOM05D007540 ORTHO05D009531 6.2e-33 144.4 138 60.1
Carub.0007s0910 Capsella rubella HOM05D007540 ORTHO05D009531 2.4e-32 142.5 139 54.0
BraA01t04213Z Brassica rapa HOM05D007540 ORTHO05D009531 4.0e-32 141.7 138 58.7
SalBow8G3153 Salvia bowleyana HOM05D007540 ORTHO05D009531 5.3e-32 141.4 138 58.0
SalBow5G2392 Salvia bowleyana HOM05D007540 ORTHO05D009531 1.5e-31 139.8 137 59.1
SalBow5G3852 Salvia bowleyana HOM05D007540 ORTHO05D009531 1.5e-31 139.8 137 59.1
SalBow5G1353 Salvia bowleyana HOM05D007540 ORTHO05D009531 2.6e-31 139.0 137 59.1
CANSAT25G0386 Cannabis sativa HOM05D007540 ORTHO05D009531 5.8e-31 137.9 133 58.6
SalBow5G1295 Salvia bowleyana HOM05D007540 ORTHO05D009531 5.8e-31 137.9 137 59.1
Carub.0001s2385 Capsella rubella HOM05D007540 ORTHO05D009531 1.0e-30 137.1 131 58.8
A02p14410 Brassica napus HOM05D007540 ORTHO05D009531 1.3e-30 136.7 140 59.3
C03p44700 Brassica napus HOM05D007540 ORTHO05D009531 1.3e-30 136.7 138 55.1
BolC3t16732H Brassica oleracea HOM05D007540 ORTHO05D009531 1.3e-30 136.7 138 55.1
BraA02t06505Z Brassica rapa HOM05D007540 ORTHO05D009531 2.9e-30 135.6 140 58.6
BcaB01g02415 Brassica carinata HOM05D007540 ORTHO05D009531 6.5e-30 134.4 103 68.9
SalBow4G2623 Salvia bowleyana HOM05D007540 ORTHO05D009531 1.1e-29 133.7 132 56.8
BcaB04g18623 Brassica carinata HOM05D007540 ORTHO05D009531 1.4e-29 133.3 137 53.3
CANSAT25G3303 Cannabis sativa HOM05D007540 ORTHO05D009531 1.9e-29 132.9 125 56.0
AT1G72260 Arabidopsis thaliana HOM05D007540 ORTHO05D009531 3.2e-29 132.1 127 58.3
CARHR057950 Cardamine hirsuta HOM05D007540 ORTHO05D009531 7.1e-29 131.0 136 56.6
Carub.0001s2384 Capsella rubella HOM05D007540 ORTHO05D009531 9.3e-29 130.6 141 55.3
AT2G15010 Arabidopsis thaliana HOM05D007540 ORTHO05D009531 1.6e-28 129.8 137 53.3
BcaC01g04144 Brassica carinata HOM05D007540 ORTHO05D009531 3.5e-28 128.6 125 54.4
BcaC03g14859 Brassica carinata HOM05D007540 ORTHO05D009531 3.5e-28 128.6 141 58.2
AL3G46810 Arabidopsis lyrata HOM05D007540 ORTHO05D009531 2.5e-26 122.5 139 50.4
SalBow1G7590 Salvia bowleyana HOM05D007540 ORTHO05D009531 4.3e-26 121.7 128 53.9
Aqoxy4G00585 Aquilegia oxysepala HOM05D007540 ORTHO05D009531 1.3e-25 120.2 110 60.0
SalBow8G0994 Salvia bowleyana HOM05D007540 ORTHO05D009531 4.8e-25 118.2 136 52.2
Thhalv10002936m.g Eutrema salsugineum HOM05D007540 ORTHO05D009531 2.4e-24 115.9 118 56.8
CARHR180400 Cardamine hirsuta HOM05D007540 ORTHO05D009531 1.5e-23 113.2 113 55.8
CARHR180470 Cardamine hirsuta HOM05D007540 ORTHO05D009531 1.0e-22 110.5 90 63.3
CARHR292600 Cardamine hirsuta HOM05D007540 ORTHO05D009531 1.7e-22 109.8 87 69.0
Carub.0007s3752 Capsella rubella HOM05D007540 ORTHO05D009531 8.5e-22 107.5 136 49.3
CARHR180370 Cardamine hirsuta HOM05D007540 ORTHO05D009531 1.1e-21 107.1 83 68.7
SalBow5G5034 Salvia bowleyana HOM05D007540 ORTHO05D009531 2.5e-21 105.9 104 57.7
Aqoxy4G01164 Aquilegia oxysepala HOM05D007540 ORTHO05D009531 6.1e-20 101.3 147 46.3
Os06g0514100 Oryza sativa ssp. japonica HOM05D007540 ORTHO05D009531 1.8e-19 99.8 131 47.3
Carub.0002s0647 Capsella rubella HOM05D007540 ORTHO05D009531 1.9e-18 96.3 87 56.3
C02p23290 Brassica napus HOM05D007540 ORTHO05D009531 7.4e-18 94.4 126 50.8
PSO732G0493 Papaver somniferum HOM05D007540 ORTHO05D009531 9.7e-18 94.0 148 38.5
PSO828G0001 Papaver somniferum HOM05D007540 ORTHO05D009531 9.7e-18 94.0 148 38.5
Carub.0007s3753 Capsella rubella HOM05D007540 ORTHO05D009531 3.1e-16 89.0 77 62.3
PSO675G0451 Papaver somniferum HOM05D007540 ORTHO05D009531 6.9e-16 87.8 143 39.9
PSO732G0564 Papaver somniferum HOM05D007540 ORTHO05D009531 5.9e-15 84.7 144 36.8
Os06g0509900 Oryza sativa ssp. japonica HOM05D007540 ORTHO05D009531 6.5e-14 81.3 125 40.0
PSO675G6065 Papaver somniferum HOM05D007540 ORTHO05D009531 1.1e-13 80.5 135 36.3
PSO675G6877 Papaver somniferum HOM05D007540 ORTHO05D009531 1.1e-13 80.5 135 36.3
Carub.0007s3757 Capsella rubella HOM05D007540 ORTHO05D009531 7.9e-12 74.3 88 51.1
Aqoxy4G00581 Aquilegia oxysepala HOM05D007540 ORTHO05D009531 1.4e-11 73.6 57 66.7
Aqoxy4G00580 Aquilegia oxysepala HOM05D007540 ORTHO05D009531 3.9e-11 72.0 59 64.4
PSO732G0153 Papaver somniferum HOM05D007540 ORTHO05D009531 3.3e-10 68.9 150 32.7
AL3G46820 Arabidopsis lyrata HOM05D007540 ORTHO05D009531 2.8e-09 65.9 81 46.9
BcaC03g14860 Brassica carinata HOM05D007540 ORTHO05D009531 1.4e-08 63.5 59 61.0
BcaB01g02552 Brassica carinata HOM05D007540 ORTHO05D009531 1.8e-08 63.2 36 80.6
PSO732G0334 Papaver somniferum HOM05D007540 ORTHO05D009531 4.5e-07 58.5 147 33.3
PSO675G5260 Papaver somniferum HOM05D015201 ORTHO05D303909 1.7e-06 56.6 65 43.1


User provided reference genes

Program Settings