Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB01g02547 Brassica carinata HOM05D002396 ORTHO05D093655 5.2e-60 234.2 119 100.0
Sp5g34810 Schrenkiella parvula HOM05D002396 ORTHO05D002779 4.2e-09 65.1 50 66.0
Thhalv10018086m.g Eutrema salsugineum HOM05D002396 ORTHO05D002779 1.6e-08 63.2 49 65.3
BcaB05g25214 Brassica carinata HOM05D002396 ORTHO05D002779 3.6e-08 62.0 47 66.0
C02p36800 Brassica napus HOM05D002396 ORTHO05D002779 3.6e-08 62.0 52 61.5
BcaC03g15917 Brassica carinata HOM05D002396 ORTHO05D002779 4.7e-08 61.6 52 59.6
Carub.0002s2661 Capsella rubella HOM05D002396 ORTHO05D002779 7.9e-08 60.8 54 59.3
A02p23050 Brassica napus HOM05D002396 ORTHO05D002779 1.0e-07 60.5 52 59.6
BolC2t09684H Brassica oleracea HOM05D002396 ORTHO05D002779 1.4e-07 60.1 52 59.6
A07p44760 Brassica napus HOM05D002396 ORTHO05D002779 3.0e-07 58.9 45 66.7
A07p26950 Brassica napus HOM05D002396 ORTHO05D002779 3.9e-07 58.5 51 58.8
BraA07t30339Z Brassica rapa HOM05D002396 ORTHO05D002779 3.9e-07 58.5 51 58.8
BolC6t40374H Brassica oleracea HOM05D002396 ORTHO05D002779 5.1e-07 58.2 52 57.7
BcaC08g47534 Brassica carinata HOM05D002396 ORTHO05D002779 6.7e-07 57.8 42 69.0
BraA02t07303Z Brassica rapa HOM05D002396 ORTHO05D002779 6.7e-07 57.8 50 58.0
BcaB02g07238 Brassica carinata HOM05D002396 ORTHO05D002779 1.1e-06 57.0 54 59.3
BolC6t38127H Brassica oleracea HOM05D002396 ORTHO05D002779 4.4e-06 55.1 50 58.0
C06p29620 Brassica napus HOM05D002396 ORTHO05D002779 5.7e-06 54.7 52 55.8
C06p53580 Brassica napus HOM05D002396 ORTHO05D002779 5.7e-06 54.7 47 59.6
AL2G40450 Arabidopsis lyrata HOM05D002396 ORTHO05D002779 9.7e-06 53.9 47 59.6


User provided reference genes

Program Settings