Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB01g02437 Brassica carinata HOM05D000885 ORTHO05D001238 9.2e-65 250.0 119 100.0
C03p37970 Brassica napus HOM05D000885 ORTHO05D001238 4.6e-32 141.4 125 62.4
Carub.0006s3496 Capsella rubella HOM05D000885 ORTHO05D001238 2.5e-30 135.6 129 58.1
Thhalv10028950m.g Eutrema salsugineum HOM05D000885 ORTHO05D001238 7.4e-30 134.0 129 57.4
Sp6g02100 Schrenkiella parvula HOM05D000885 ORTHO05D001238 1.3e-29 133.3 129 57.4
CARHR250420 Cardamine hirsuta HOM05D000885 ORTHO05D001238 6.9e-28 127.5 132 54.5
AT4G02200 Arabidopsis thaliana HOM05D000885 ORTHO05D001238 1.5e-27 126.3 71 83.1
AL6G50930 Arabidopsis lyrata HOM05D000885 ORTHO05D001238 2.5e-25 119.0 74 78.4
Aa31LG5G1870 Aethionema arabicum HOM05D000885 ORTHO05D001238 6.9e-20 100.9 107 56.1
Thhalv10008730m.g Eutrema salsugineum HOM05D000885 ORTHO05D001238 2.0e-14 82.8 75 54.7
Aa31LG1G9840 Aethionema arabicum HOM05D000885 ORTHO05D001238 3.1e-12 75.5 78 47.4
Carub.0001s0186 Capsella rubella HOM05D000885 ORTHO05D001238 3.1e-12 75.5 74 51.4
AT1G02750 Arabidopsis thaliana HOM05D000885 ORTHO05D001238 6.9e-12 74.3 75 50.7
BcaNung06747 Brassica carinata HOM05D000885 ORTHO05D001238 2.0e-11 72.8 76 48.7
C05p01410 Brassica napus HOM05D000885 ORTHO05D001238 2.0e-11 72.8 76 48.7
BolC5t28923H Brassica oleracea HOM05D000885 ORTHO05D001238 2.0e-11 72.8 76 48.7
AL1G12130 Arabidopsis lyrata HOM05D000885 ORTHO05D001238 4.5e-11 71.6 74 48.6
A10p01440 Brassica napus HOM05D000885 ORTHO05D001238 5.9e-11 71.2 76 47.4
Sp1g01730 Schrenkiella parvula HOM05D000885 ORTHO05D001238 5.9e-11 71.2 76 47.4
CARHR002050 Cardamine hirsuta HOM05D000885 ORTHO05D001238 7.7e-11 70.9 74 47.3
BraA09t42198Z Brassica rapa HOM05D000885 ORTHO05D001238 1.0e-10 70.5 82 48.8
C08p53160 Brassica napus HOM05D000885 ORTHO05D001238 1.7e-10 69.7 83 48.2
BraA10t42420Z Brassica rapa HOM05D000885 ORTHO05D001238 1.7e-10 69.7 76 46.1
BcaC07g42304 Brassica carinata HOM05D000885 ORTHO05D001238 2.2e-10 69.3 68 55.9
BcaC07g42405 Brassica carinata HOM05D000885 ORTHO05D001238 3.8e-10 68.6 86 46.5
BolC8t52831H Brassica oleracea HOM05D000885 ORTHO05D001238 3.8e-10 68.6 86 46.5
THA.LOC104825956 Tarenaya hassleriana HOM05D000885 ORTHO05D001238 1.9e-09 66.2 75 48.0
QL12p028668 Quercus lobata HOM05D000885 ORTHO05D001238 2.5e-09 65.9 89 42.7
A09p68550 Brassica napus HOM05D000885 ORTHO05D001238 3.2e-09 65.5 82 46.3
Sabra02G0158100 Salix brachista HOM05D000885 ORTHO05D001238 6.1e-08 61.2 64 45.3
Potri.014G125500 Populus trichocarpa HOM05D000885 ORTHO05D001238 1.0e-07 60.5 66 43.9
Thecc.01G307400 Theobroma cacao HOM05D000885 ORTHO05D001238 8.8e-07 57.4 64 45.3
Duzib133G0495 Durio zibethinus HOM05D000885 ORTHO05D001238 2.6e-06 55.8 72 41.7
COL.COLO4_23290 Corchorus olitorius HOM05D000885 ORTHO05D001238 3.3e-06 55.5 61 47.5
Gohir.A11G112600 Gossypium hirsutum HOM05D000885 ORTHO05D001238 4.4e-06 55.1 72 41.7
Gohir.D11G117600 Gossypium hirsutum HOM05D000885 ORTHO05D001238 4.4e-06 55.1 72 41.7
Gorai.007G126000 Gossypium raimondii HOM05D000885 ORTHO05D001238 4.4e-06 55.1 72 41.7


User provided reference genes

Program Settings