Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB01g02303 Brassica carinata HOM05D000281 ORTHO05D000290 6.3e-49 197.2 106 100.0
Aa31LG5G140 Aethionema arabicum HOM05D000281 ORTHO05D000290 4.4e-18 94.7 59 78.0
AT4G00080 Arabidopsis thaliana HOM05D000281 ORTHO05D000290 9.8e-18 93.6 59 76.3
BcaB01g02180 Brassica carinata HOM05D000281 ORTHO05D000290 9.8e-18 93.6 59 76.3
BcaB01g02209 Brassica carinata HOM05D000281 ORTHO05D000290 9.8e-18 93.6 59 76.3
BcaC01g04889 Brassica carinata HOM05D000281 ORTHO05D000290 9.8e-18 93.6 59 76.3
BcaC04g24203 Brassica carinata HOM05D000281 ORTHO05D000290 9.8e-18 93.6 59 76.3
A03p27140 Brassica napus HOM05D000281 ORTHO05D000290 9.8e-18 93.6 59 76.3
C03p32600 Brassica napus HOM05D000281 ORTHO05D000290 9.8e-18 93.6 59 76.3
C09p00100 Brassica napus HOM05D000281 ORTHO05D000290 9.8e-18 93.6 59 76.3
BolC3t15599H Brassica oleracea HOM05D000281 ORTHO05D000290 9.8e-18 93.6 59 76.3
BolC9t52945H Brassica oleracea HOM05D000281 ORTHO05D000290 9.8e-18 93.6 59 76.3
BraA03t11927Z Brassica rapa HOM05D000281 ORTHO05D000290 9.8e-18 93.6 59 76.3
BraA09t35684Z Brassica rapa HOM05D000281 ORTHO05D000290 9.8e-18 93.6 59 76.3
Carub.0006s3715 Capsella rubella HOM05D000281 ORTHO05D000290 9.8e-18 93.6 59 76.3
CARHR248120 Cardamine hirsuta HOM05D000281 ORTHO05D000290 9.8e-18 93.6 59 76.3
Thhalv10028964m.g Eutrema salsugineum HOM05D000281 ORTHO05D000290 1.7e-17 92.8 59 76.3
AL6G53440 Arabidopsis lyrata HOM05D000281 ORTHO05D000290 4.9e-17 91.3 59 74.6
Sp6g00140 Schrenkiella parvula HOM05D000281 ORTHO05D000290 1.9e-16 89.4 59 72.9
THA.LOC104817007 Tarenaya hassleriana HOM05D000281 ORTHO05D000290 1.2e-15 86.7 59 69.5
Thecc.01G379200 Theobroma cacao HOM05D000281 ORTHO05D000290 9.9e-10 67.0 56 55.4
COL.COLO4_12523 Corchorus olitorius HOM05D000281 ORTHO05D000290 1.7e-09 66.2 56 57.1
Duzib133G0782 Durio zibethinus HOM05D000281 ORTHO05D000290 3.8e-09 65.1 56 53.6
TWI59G1456 Tripterygium wilfordii HOM05D000281 ORTHO05D000290 8.4e-09 63.9 83 47.0
Manes.05G047300 Manihot esculenta HOM05D000281 ORTHO05D000290 1.1e-08 63.5 56 51.8
QL08p052893 Quercus lobata HOM05D000281 ORTHO05D000290 1.4e-08 63.2 59 49.2
Gohir.D08G156800 Gossypium hirsutum HOM05D000281 ORTHO05D000290 1.9e-08 62.8 56 53.6
Sabra02G0113600 Salix brachista HOM05D000642 ORTHO05D000483 1.9e-08 62.8 66 45.5
Gohir.A11G079900 Gossypium hirsutum HOM05D000281 ORTHO05D000290 2.4e-08 62.4 56 53.6
Psat7g230760 Pisum sativum HOM05D000281 ORTHO05D000290 2.4e-08 62.4 56 55.4
Psat7g230800 Pisum sativum HOM05D000281 ORTHO05D000290 2.4e-08 62.4 56 55.4
Cpa.g.sc145.16 Carica papaya HOM05D000281 ORTHO05D000290 4.1e-08 61.6 56 50.0
Medtr4g025550 Medicago truncatula HOM05D000281 ORTHO05D000290 4.1e-08 61.6 55 56.4
Medtr4g025590 Medicago truncatula HOM05D000281 ORTHO05D000290 4.1e-08 61.6 55 56.4
Medtr4g025620 Medicago truncatula HOM05D000281 ORTHO05D000290 4.1e-08 61.6 55 56.4
CiPaw.01G264300 Carya illinoinensis HOM05D000281 ORTHO05D000290 5.4e-08 61.2 56 51.8
Ciclev10024438m.g Citrus clementina HOM05D000281 ORTHO05D000290 5.4e-08 61.2 56 53.6
arahy.Tifrunner.gnm1.ann1.45AVND Arachis hypogaea HOM05D000281 ORTHO05D000290 7.1e-08 60.8 61 52.5
arahy.Tifrunner.gnm1.ann1.ZG7FH2 Arachis hypogaea HOM05D000281 ORTHO05D000290 7.1e-08 60.8 61 52.5
FAN10G1453 Fragaria x ananassa HOM05D000281 ORTHO05D000290 9.2e-08 60.5 55 52.7
FAN10G1663 Fragaria x ananassa HOM05D000281 ORTHO05D000290 9.2e-08 60.5 55 52.7
Prupe.2G141800 Prunus persica HOM05D000281 ORTHO05D000290 9.2e-08 60.5 55 52.7
CiPaw.02G169500 Carya illinoinensis HOM05D000281 ORTHO05D000290 1.2e-07 60.1 55 52.7
Gohir.D11G084600 Gossypium hirsutum HOM05D000281 ORTHO05D000290 1.2e-07 60.1 56 51.8
Gorai.007G090200 Gossypium raimondii HOM05D000281 ORTHO05D000290 1.2e-07 60.1 56 51.8
Medtr4g025610 Medicago truncatula HOM05D000281 ORTHO05D000290 1.6e-07 59.7 55 54.5
Lj3g0022196 Lotus japonicus HOM05D000281 ORTHO05D000290 2.7e-07 58.9 57 50.9
Cfa001766 Carpinus fangiana HOM05D000281 ORTHO05D000290 3.5e-07 58.5 56 50.0
FvH4_7g11390 Fragaria vesca HOM05D000281 ORTHO05D000290 3.5e-07 58.5 55 50.9
FAN06G2178 Fragaria x ananassa HOM05D000281 ORTHO05D000290 3.5e-07 58.5 55 50.9
FAN06G4427 Fragaria x ananassa HOM05D000281 ORTHO05D000290 3.5e-07 58.5 55 50.9
TPR.G39078 Trifolium pratense HOM05D000281 ORTHO05D000290 3.5e-07 58.5 56 51.8
Lj3g0014508 Lotus japonicus HOM05D000281 ORTHO05D000290 4.6e-07 58.2 55 52.7
Lalb_Chr03g0039681 Lupinus albus HOM05D000281 ORTHO05D000290 4.6e-07 58.2 56 51.8
Phvul.002G180032 Phaseolus vulgaris HOM05D000281 ORTHO05D000290 4.6e-07 58.2 59 49.2
Psat3g161800 Pisum sativum HOM05D000281 ORTHO05D000290 6.0e-07 57.8 56 51.8
Potri.002G145800 Populus trichocarpa HOM05D000281 ORTHO05D000290 6.0e-07 57.8 56 48.2
AUR62002189 Chenopodium quinoa HOM05D000281 ORTHO05D000290 1.0e-06 57.0 71 39.4
Glyma.03G028600 Glycine max HOM05D000281 ORTHO05D000290 1.0e-06 57.0 56 50.0
Haze_16789 Corylus avellana HOM05D000281 ORTHO05D000290 1.3e-06 56.6 56 48.2
VMungo0251G0381 Vigna mungo HOM05D000281 ORTHO05D000290 1.7e-06 56.2 59 47.5
Glyma.03G028500 Glycine max HOM05D000281 ORTHO05D000290 2.3e-06 55.8 56 50.0
Lalb_Chr07g0190001 Lupinus albus HOM05D000281 ORTHO05D000290 2.3e-06 55.8 62 48.4
RcHm_v2.0_Chr1g0349671 Rosa chinensis HOM05D000281 ORTHO05D000290 2.3e-06 55.8 56 48.2
AUR62015522 Chenopodium quinoa HOM05D000281 ORTHO05D000290 3.0e-06 55.5 65 41.5
FAN01G0538 Fragaria x ananassa HOM05D000281 ORTHO05D000290 3.0e-06 55.5 55 47.3
Glyma.01G138600 Glycine max HOM05D000281 ORTHO05D000290 3.0e-06 55.5 56 50.0
TAR629G3157 Trochodendron aralioides HOM05D000281 ORTHO05D000290 3.9e-06 55.1 57 49.1
Dinv32362 Davidia involucrata HOM05D000281 ORTHO05D000290 6.6e-06 54.3 69 47.8
Phvul.010G080600 Phaseolus vulgaris HOM05D000281 ORTHO05D000290 6.6e-06 54.3 57 47.4
Phvul.010G080700 Phaseolus vulgaris HOM05D000281 ORTHO05D000290 6.6e-06 54.3 57 47.4
CiPaw.04G061300 Carya illinoinensis HOM05D000281 ORTHO05D000290 8.6e-06 53.9 57 47.4
Ca_20710_v3 Cicer arietinum L. HOM05D000281 ORTHO05D000290 8.6e-06 53.9 85 40.0


User provided reference genes

Program Settings