Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB01g02147 Brassica carinata HOM05D037213 ORTHO05D001242 6.6e-148 527.3 261 100.0
BcaB07g33660 Brassica carinata HOM05D000313 ORTHO05D001242 1.8e-76 290.0 175 87.4
C08p40480 Brassica napus HOM05D000442 ORTHO05D001242 3.3e-59 232.6 181 71.8
BolC8t51619H Brassica oleracea HOM05D000442 ORTHO05D001242 3.3e-59 232.6 181 71.8
BcaB08g35101 Brassica carinata HOM05D000442 ORTHO05D001242 2.8e-58 229.6 182 72.0
BcaC07g41047 Brassica carinata HOM05D000442 ORTHO05D001242 2.8e-58 229.6 182 72.0
BcaB08g35104 Brassica carinata HOM05D000442 ORTHO05D001242 8.2e-58 228.0 185 68.6
A09p57400 Brassica napus HOM05D000442 ORTHO05D001242 2.4e-57 226.5 182 71.4
BraA09t41132Z Brassica rapa HOM05D000442 ORTHO05D001242 1.0e-55 221.1 182 69.8
BcaB02g11419 Brassica carinata HOM05D000313 ORTHO05D001242 1.7e-47 193.7 175 65.7
A04p17070 Brassica napus HOM05D000442 ORTHO05D001242 3.7e-42 176.0 193 57.0
C04p51810 Brassica napus HOM05D000442 ORTHO05D001242 1.4e-41 174.1 193 57.0
BolC4t26756H Brassica oleracea HOM05D000442 ORTHO05D001242 1.4e-41 174.1 193 57.0
BraA04t17336Z Brassica rapa HOM05D000442 ORTHO05D001242 1.4e-41 174.1 193 56.5
BcaC02g08640 Brassica carinata HOM05D000442 ORTHO05D001242 7.0e-41 171.8 193 57.0
CARHR113820 Cardamine hirsuta HOM05D000442 ORTHO05D001242 6.6e-39 165.2 198 55.1
AT2G22600 Arabidopsis thaliana HOM05D000442 ORTHO05D001242 1.5e-38 164.1 197 55.8
AL4G12140 Arabidopsis lyrata HOM05D000442 ORTHO05D001242 4.3e-38 162.5 196 55.1
Thhalv10000090m.g Eutrema salsugineum HOM05D000442 ORTHO05D001242 3.0e-36 156.4 176 56.8
Carub.0004s0175 Capsella rubella HOM05D000442 ORTHO05D001242 4.4e-35 152.5 191 54.5
Sp4g01640 Schrenkiella parvula HOM05D000442 ORTHO05D001242 9.2e-33 144.8 121 68.6
Aa31LG7G14240 Aethionema arabicum HOM05D000442 ORTHO05D001242 1.0e-28 131.3 176 47.7
BcaB02g11203 Brassica carinata HOM05D037213 ORTHO05D001242 1.4e-28 131.0 66 98.5
BcaB07g32275 Brassica carinata HOM05D037213 ORTHO05D001242 1.4e-28 131.0 66 98.5
Aa31LG7G14230 Aethionema arabicum HOM05D000442 ORTHO05D001242 1.2e-16 91.3 174 40.2
THA.LOC104804179 Tarenaya hassleriana HOM05D000442 ORTHO05D001242 3.0e-15 86.7 199 38.2
Potri.007G012000 Populus trichocarpa HOM05D000442 ORTHO05D001242 1.2e-08 64.7 81 44.4
Atru.chr3.1222 Acer truncatum HOM05D000442 ORTHO05D001242 2.7e-08 63.5 162 31.5
Manes.13G101500 Manihot esculenta HOM05D000442 ORTHO05D001242 3.5e-08 63.2 152 30.9
Potri.007G011900 Populus trichocarpa HOM05D000442 ORTHO05D001242 5.1e-07 59.3 93 40.9
Sabra07G0009300 Salix brachista HOM05D000442 ORTHO05D001242 7.3e-06 55.5 69 47.8
Sabra15G0071400 Salix brachista HOM05D000442 ORTHO05D001242 9.6e-06 55.1 83 41.0


User provided reference genes

Program Settings