Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB01g02141 Brassica carinata HOM05D000010 ORTHO05D010977 9.8e-121 436.8 218 100.0
BcaC04g24089 Brassica carinata HOM05D000010 ORTHO05D010977 1.5e-60 236.9 276 56.5
C09p01180 Brassica napus HOM05D000010 ORTHO05D010977 2.1e-59 233.0 227 62.6
BolC9t53051H Brassica oleracea HOM05D000010 ORTHO05D010977 2.1e-59 233.0 227 62.6
A09p01080 Brassica napus HOM05D000010 ORTHO05D010977 1.5e-52 210.3 262 53.4
BcaB01g02140 Brassica carinata HOM05D000010 ORTHO05D010977 9.6e-52 207.6 273 50.2
BolC9t53052H Brassica oleracea HOM05D000010 ORTHO05D010977 9.0e-50 201.1 267 50.6
C09p01190 Brassica napus HOM05D000010 ORTHO05D010977 4.5e-49 198.7 266 50.4
BcaC04g24088 Brassica carinata HOM05D000010 ORTHO05D010977 6.5e-48 194.9 271 49.8
BraA09t35782Z Brassica rapa HOM05D000010 ORTHO05D010977 1.5e-44 183.7 332 42.2
BolC9t53053H Brassica oleracea HOM05D000010 ORTHO05D010977 9.1e-34 147.9 202 48.0
BcaB01g02138 Brassica carinata HOM05D000010 ORTHO05D010977 5.0e-32 142.1 203 48.8
BcaC04g24087 Brassica carinata HOM05D000010 ORTHO05D010977 5.0e-32 142.1 187 47.6
A09p01090 Brassica napus HOM05D000010 ORTHO05D010977 5.0e-32 142.1 161 53.4
BcaB05g23982 Brassica carinata HOM05D000010 ORTHO05D010977 1.1e-31 141.0 274 39.4
BolC2t09883H Brassica oleracea HOM05D000010 ORTHO05D010977 1.9e-31 140.2 273 38.8
BraA02t07438Z Brassica rapa HOM05D000010 ORTHO05D010977 1.9e-31 140.2 273 38.8
Sp6g01460 Schrenkiella parvula HOM05D000010 ORTHO05D010977 7.2e-31 138.3 279 40.9
BcaC03g16096 Brassica carinata HOM05D000010 ORTHO05D010977 3.6e-30 136.0 273 38.1
Thhalv10028684m.g Eutrema salsugineum HOM05D000010 ORTHO05D010977 7.7e-25 118.2 271 35.8
CARHR250120 Cardamine hirsuta HOM05D000010 ORTHO05D010977 2.8e-19 99.8 284 35.2
AT4G01550 Arabidopsis thaliana HOM05D000010 ORTHO05D010977 1.8e-18 97.1 295 34.2
AL3G14780 Arabidopsis lyrata HOM05D000010 ORTHO05D031313 1.6e-17 94.0 177 42.4
A02p24480 Brassica napus HOM05D000010 ORTHO05D010977 5.0e-16 89.0 130 47.7
AL6G51790 Arabidopsis lyrata HOM05D000010 ORTHO05D010977 1.9e-15 87.0 240 35.0
C02p38660 Brassica napus HOM05D000010 ORTHO05D010977 1.9e-15 87.0 130 46.9
Carub.0006s3565 Capsella rubella HOM05D000010 ORTHO05D010977 9.4e-15 84.7 280 34.6
CARHR250130 Cardamine hirsuta HOM05D000010 ORTHO05D010977 1.2e-14 84.3 319 30.4
AL6G51810 Arabidopsis lyrata HOM05D000010 ORTHO05D031313 2.1e-14 83.6 129 48.8
AL6G51800 Arabidopsis lyrata HOM05D000010 ORTHO05D010977 8.8e-13 78.2 122 48.4
CARHR250160 Cardamine hirsuta HOM05D000010 ORTHO05D031313 8.2e-11 71.6 200 31.0
CARHR250140 Cardamine hirsuta HOM05D000010 ORTHO05D010977 8.5e-08 61.6 102 43.1
Aa31LG5G1270 Aethionema arabicum HOM05D000010 ORTHO05D010977 1.5e-07 60.8 230 28.7
BraA09t35780Z Brassica rapa HOM05D000010 ORTHO05D010977 1.2e-06 57.8 101 36.6


User provided reference genes

Program Settings