Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB01g02118 Brassica carinata HOM05D004613 ORTHO05D014940 1.0e-44 183.0 89 100.0
BcaC04g20970 Brassica carinata HOM05D004613 ORTHO05D014940 1.2e-24 116.3 71 80.3
BcaC03g15600 Brassica carinata HOM05D008340 ORTHO05D014940 2.9e-23 111.7 71 78.9
BolC9t56574H Brassica oleracea HOM05D004613 ORTHO05D014940 2.1e-21 105.5 71 73.2
C04p20620 Brassica napus HOM05D000249 ORTHO05D032228 4.0e-20 101.3 73 71.2
C08p07130 Brassica napus HOM05D004613 ORTHO05D014940 5.2e-20 100.9 72 69.4
BolC2t08054H Brassica oleracea HOM05D004613 ORTHO05D014940 3.4e-19 98.2 71 67.6
BcaB02g10346 Brassica carinata HOM05D004613 ORTHO05D014940 2.0e-16 89.0 73 64.4
BraA06t25731Z Brassica rapa HOM05D030286 ORTHO05D014940 6.1e-13 77.4 95 49.5
BcaC09g50421 Brassica carinata HOM05D004613 ORTHO05D006095 1.3e-10 69.7 91 49.5
BcaC02g11915 Brassica carinata HOM05D004613 ORTHO05D014940 2.2e-10 68.9 42 73.8
BcaC02g11089 Brassica carinata HOM05D000249 ORTHO05D032228 2.8e-10 68.6 112 42.9
BcaNung04365 Brassica carinata HOM05D004613 ORTHO05D006095 2.8e-10 68.6 39 79.5
BcaB04g19666 Brassica carinata HOM05D004613 ORTHO05D006095 1.1e-09 66.6 39 74.4
BolC7t44599H Brassica oleracea HOM05D004613 ORTHO05D006095 1.2e-08 63.2 39 74.4
BcaNung02466 Brassica carinata HOM05D004613 ORTHO05D006095 1.6e-08 62.8 39 74.4
A06p37600 Brassica napus HOM05D004613 ORTHO05D006095 1.6e-08 62.8 39 74.4
C07p40710 Brassica napus HOM05D004613 ORTHO05D006095 1.6e-08 62.8 39 74.4
BraA06t26679Z Brassica rapa HOM05D004613 ORTHO05D006095 1.6e-08 62.8 39 74.4
Sp2g20610 Schrenkiella parvula HOM05D004613 ORTHO05D006095 4.5e-08 61.2 39 71.8
C04p31600 Brassica napus HOM05D004613 ORTHO05D006095 6.6e-07 57.4 53 56.6
Thhalv10004565m.g Eutrema salsugineum HOM05D004613 ORTHO05D006095 1.5e-06 56.2 49 57.1
C01p25640 Brassica napus HOM05D004613 ORTHO05D006095 4.3e-06 54.7 53 58.5
BcaC02g11087 Brassica carinata HOM05D004010 ORTHO05D006095 7.3e-06 53.9 54 57.4
C04p20640 Brassica napus HOM05D004613 ORTHO05D006095 7.3e-06 53.9 62 53.2
BolC4t23591H Brassica oleracea HOM05D004613 ORTHO05D006095 7.3e-06 53.9 62 53.2


User provided reference genes

Program Settings