Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB01g02019 Brassica carinata HOM05D000654 ORTHO05D094469 8.4e-32 139.8 74 100.0
Sp4g02370 Schrenkiella parvula HOM05D000654 ORTHO05D002711 1.8e-10 68.9 49 79.6
BcaB06g27895 Brassica carinata HOM05D000654 ORTHO05D002711 2.4e-10 68.6 51 78.4
Thhalv10000040m.g Eutrema salsugineum HOM05D000654 ORTHO05D002711 2.4e-10 68.6 49 79.6
AL4G13270 Arabidopsis lyrata HOM05D000654 ORTHO05D002711 4.0e-10 67.8 49 75.5
Carub.0004s0256 Capsella rubella HOM05D000654 ORTHO05D002711 5.3e-10 67.4 49 75.5
BcaC07g40990 Brassica carinata HOM05D000654 ORTHO05D002711 3.4e-09 64.7 48 81.2
C08p39910 Brassica napus HOM05D000654 ORTHO05D002711 3.4e-09 64.7 48 81.2
BraA09t41087Z Brassica rapa HOM05D000654 ORTHO05D002711 3.4e-09 64.7 48 81.2
BolC8t51564H Brassica oleracea HOM05D000654 ORTHO05D002711 4.5e-09 64.3 48 81.2
AT2G23360 Arabidopsis thaliana HOM05D000654 ORTHO05D002711 5.8e-09 63.9 49 69.4
A09p56950 Brassica napus HOM05D000654 ORTHO05D002711 5.8e-09 63.9 48 79.2
C04p52750 Brassica napus HOM05D000654 ORTHO05D002711 6.5e-08 60.5 46 76.1
Aa31LG7G13610 Aethionema arabicum HOM05D000654 ORTHO05D002711 4.2e-07 57.8 46 71.7
CARHR292990 Cardamine hirsuta HOM05D000654 ORTHO05D002711 4.2e-07 57.8 43 76.7
THA.LOC104807592 Tarenaya hassleriana HOM05D000654 ORTHO05D002711 9.3e-07 56.6 49 67.3
MSTRG.15381 Avicennia marina HOM05D000654 ORTHO05D002711 2.7e-06 55.1 46 63.0


User provided reference genes

Program Settings