Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB01g01975 Brassica carinata HOM05D000630 ORTHO05D014858 1.2e-120 436.4 209 100.0
A10p01130 Brassica napus HOM05D000630 ORTHO05D014858 4.2e-44 182.2 235 45.1
BolC5t28898H Brassica oleracea HOM05D000630 ORTHO05D014858 1.0e-42 177.6 235 44.3
C05p01160 Brassica napus HOM05D000630 ORTHO05D014858 1.2e-38 164.1 234 43.2
BcaB03g15794 Brassica carinata HOM05D000630 ORTHO05D014858 4.8e-32 142.1 214 44.4
BcaB02g09680 Brassica carinata HOM05D000630 ORTHO05D014858 3.8e-13 79.3 153 35.3
CARHR001450 Cardamine hirsuta HOM05D000630 ORTHO05D014858 3.5e-11 72.8 150 34.7
CARHR141820 Cardamine hirsuta HOM05D000630 ORTHO05D001478 6.3e-08 62.0 149 30.9
BolC5t28869H Brassica oleracea HOM05D000630 ORTHO05D014858 1.4e-07 60.8 152 30.9
Hund27195 Selenicereus undatus HOM05D000630 ORTHO05D001478 1.4e-07 60.8 166 33.1
Sabra01G0066500 Salix brachista HOM05D000630 ORTHO05D001478 1.8e-07 60.5 131 34.4
Thecc.03G109800 Theobroma cacao HOM05D000630 ORTHO05D001413 1.8e-07 60.5 137 31.4
ECA233G3762 Erigeron canadensis HOM05D000630 ORTHO05D001478 3.1e-07 59.7 101 40.6
A04p34390 Brassica napus HOM05D000630 ORTHO05D001478 4.1e-07 59.3 149 30.9
A10p00820 Brassica napus HOM05D000630 ORTHO05D014858 5.3e-07 58.9 76 42.1
Lalb_Chr16g0390681 Lupinus albus HOM05D000630 ORTHO05D001478 6.9e-07 58.5 132 34.8
Potri.001G090300 Populus trichocarpa HOM05D000630 ORTHO05D001478 9.0e-07 58.2 131 35.9
Haze_20286 Corylus avellana HOM05D000630 ORTHO05D001413 1.2e-06 57.8 71 39.4
Lj2A165T42 Lonicera japonica HOM05D000630 ORTHO05D001478 1.2e-06 57.8 159 32.1
AL4G45910 Arabidopsis lyrata HOM05D000630 ORTHO05D001478 1.5e-06 57.4 155 29.0
DCAR_025254 Daucus carota HOM05D000630 ORTHO05D001478 1.5e-06 57.4 165 30.9
Ciclev10019472m.g Citrus clementina HOM05D000630 ORTHO05D001478 2.0e-06 57.0 131 35.1
BraA04t18900Z Brassica rapa HOM05D000630 ORTHO05D001478 2.6e-06 56.6 149 30.2
Sp4g28520 Schrenkiella parvula HOM05D000630 ORTHO05D001478 2.6e-06 56.6 155 31.0
Hund11664 Selenicereus undatus HOM05D000630 ORTHO05D001478 2.6e-06 56.6 160 31.9
Thecc.03G299900 Theobroma cacao HOM05D000630 ORTHO05D001478 2.6e-06 56.6 131 33.6
TWI60G0962 Tripterygium wilfordii HOM05D000630 ORTHO05D001478 2.6e-06 56.6 133 34.6
CANSAT56G2781 Cannabis sativa HOM05D000630 ORTHO05D001478 3.4e-06 56.2 155 31.6
CiPaw.02G040900 Carya illinoinensis HOM05D000630 ORTHO05D001478 3.4e-06 56.2 157 31.2
Glyma.01G226200 Glycine max HOM05D000630 ORTHO05D001478 3.4e-06 56.2 131 33.6
Glyma.07G055500 Glycine max HOM05D000630 ORTHO05D001478 3.4e-06 56.2 156 32.1
BcaC02g07034 Brassica carinata HOM05D000630 ORTHO05D001478 4.5e-06 55.8 149 29.5
CARHR189300 Cardamine hirsuta HOM05D000630 ORTHO05D001478 4.5e-06 55.8 132 31.1
Nitab4.5_0000258g0180 Nicotiana tabacum HOM05D000630 ORTHO05D001478 4.5e-06 55.8 155 29.7
Nitab4.5_0001210g0140 Nicotiana tabacum HOM05D000630 ORTHO05D001478 4.5e-06 55.8 172 29.7
TWI23G1089 Tripterygium wilfordii HOM05D000630 ORTHO05D001478 4.5e-06 55.8 154 31.2
DCAR_005390 Daucus carota HOM05D000630 ORTHO05D001478 5.9e-06 55.5 155 32.9
Phvul.002G165100 Phaseolus vulgaris HOM05D000630 ORTHO05D001478 5.9e-06 55.5 131 33.6
Rhsim02G0244900 Rhododendron simsii HOM05D000630 ORTHO05D001478 5.9e-06 55.5 162 30.2
TWI53G2074 Tripterygium wilfordii HOM05D000630 ORTHO05D001413 5.9e-06 55.5 80 33.8
MSTRG.7726 Avicennia marina HOM05D000630 ORTHO05D001413 7.7e-06 55.1 141 28.4
Gohir.A05G414700 Gossypium hirsutum HOM05D000630 ORTHO05D001478 7.7e-06 55.1 158 28.5
Gorai.012G002500 Gossypium raimondii HOM05D000630 ORTHO05D001478 7.7e-06 55.1 158 28.5
HanXRQChr08g0215001 Helianthus annuus HOM05D000630 ORTHO05D001413 7.7e-06 55.1 120 31.7
Potri.010G137400 Populus trichocarpa HOM05D000630 ORTHO05D001413 7.7e-06 55.1 139 30.2
EL10Ac1g00265 Beta vulgaris HOM05D000630 ORTHO05D001478 1.0e-05 54.7 157 31.2
Cfa019952 Carpinus fangiana HOM05D000630 ORTHO05D001413 1.0e-05 54.7 71 39.4
Eucgr.K00373 Eucalyptus grandis HOM05D000630 ORTHO05D001478 1.0e-05 54.7 157 30.6
Gohir.D12G115900 Gossypium hirsutum HOM05D000630 ORTHO05D001478 1.0e-05 54.7 153 29.4
Gorai.008G125500 Gossypium raimondii HOM05D000630 ORTHO05D001478 1.0e-05 54.7 153 29.4
HPP92_014256 Vanilla planifolia HOM05D000630 ORTHO05D001413 1.0e-05 54.7 72 37.5


User provided reference genes

Program Settings