Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB01g01924 Brassica carinata HOM05D001419 ORTHO05D016050 4.9e-92 341.3 192 100.0
BcaB01g01072 Brassica carinata HOM05D001419 ORTHO05D001376 2.9e-52 209.1 162 81.5
BraA06t24972Z Brassica rapa HOM05D001419 ORTHO05D001376 1.2e-34 150.6 120 77.5
BcaC07g39361 Brassica carinata HOM05D001419 ORTHO05D001376 2.7e-34 149.4 120 76.7
BolC8t50009H Brassica oleracea HOM05D001419 ORTHO05D001376 2.7e-34 149.4 120 76.7
BcaB01g00776 Brassica carinata HOM05D001419 ORTHO05D001376 1.5e-32 143.7 121 76.0
A06p18890 Brassica napus HOM05D001419 ORTHO05D001376 2.6e-32 142.9 122 74.6
Sp5g13190 Schrenkiella parvula HOM05D001419 ORTHO05D001376 2.2e-31 139.8 120 74.2
Carub.0005s1503 Capsella rubella HOM05D001419 ORTHO05D001376 8.2e-31 137.9 178 56.7
C08p23830 Brassica napus HOM05D001419 ORTHO05D001376 1.2e-29 134.0 122 72.1
CARHR157670 Cardamine hirsuta HOM05D001419 ORTHO05D001376 1.5e-27 127.1 120 68.3
Thhalv10010238m.g Eutrema salsugineum HOM05D001419 ORTHO05D001376 1.5e-27 127.1 124 68.5
AL5G28370 Arabidopsis lyrata HOM05D001419 ORTHO05D001376 3.2e-27 125.9 122 68.9
Aa31LG8G2550 Aethionema arabicum HOM05D000710 ORTHO05D000336 2.7e-26 122.9 202 49.5
AT3G48860 Arabidopsis thaliana HOM05D001419 ORTHO05D001376 8.8e-25 117.9 123 65.9
Aa31LG4G17370 Aethionema arabicum HOM05D001419 ORTHO05D001376 1.5e-24 117.1 120 64.2
MD14G1149000 Malus domestica HOM05D001419 ORTHO05D001376 1.6e-13 80.5 169 42.6
Prupe.5G143600 Prunus persica HOM05D001419 ORTHO05D001376 1.6e-13 80.5 151 42.4
Cpa.g.sc4.110 Carica papaya HOM05D001419 ORTHO05D001376 3.5e-13 79.3 90 54.4
MD06G1132600 Malus domestica HOM05D001419 ORTHO05D001376 5.9e-13 78.6 195 40.5
Manes.06G125500 Manihot esculenta HOM05D001419 ORTHO05D001376 1.7e-12 77.0 152 41.4
Thecc.03G138300 Theobroma cacao HOM05D001419 ORTHO05D001376 8.6e-12 74.7 140 44.3
Rhsim08G0195700 Rhododendron simsii HOM05D001419 ORTHO05D001376 4.3e-11 72.4 164 41.5
CANSAT56G3001 Cannabis sativa HOM05D001419 ORTHO05D001376 5.6e-11 72.0 152 39.5
Haze_07114 Corylus avellana HOM05D001419 ORTHO05D001376 7.3e-11 71.6 150 40.7
FvH4_5g09200 Fragaria vesca HOM05D001419 ORTHO05D001376 2.1e-10 70.1 171 38.6
TWI23G1068 Tripterygium wilfordii HOM05D001419 ORTHO05D001376 2.1e-10 70.1 152 40.8
TWI39G0619 Tripterygium wilfordii HOM05D001419 ORTHO05D001376 2.8e-10 69.7 155 40.0
Duzib205G1629 Durio zibethinus HOM05D001419 ORTHO05D001376 4.7e-10 68.9 143 42.0
CARHR189850 Cardamine hirsuta HOM05D001419 ORTHO05D001376 6.1e-10 68.6 165 40.0
Gohir.A11G038200 Gossypium hirsutum HOM05D001419 ORTHO05D001376 8.0e-10 68.2 75 61.3
Thhalv10003911m.g Eutrema salsugineum HOM05D001419 ORTHO05D001376 1.4e-09 67.4 66 60.6
Gorai.008G210100 Gossypium raimondii HOM05D001419 ORTHO05D001376 1.8e-09 67.0 72 55.6
Ca_16082_v3 Cicer arietinum L. HOM05D001419 ORTHO05D001376 2.3e-09 66.6 79 57.0
Gorai.007G044600 Gossypium raimondii HOM05D001419 ORTHO05D001376 2.3e-09 66.6 133 44.4
Cfa018722 Carpinus fangiana HOM05D001419 ORTHO05D001376 3.1e-09 66.2 151 39.1
CiPaw.11G001500 Carya illinoinensis HOM05D001419 ORTHO05D001376 3.1e-09 66.2 122 40.2
Gohir.D11G041500 Gossypium hirsutum HOM05D001419 ORTHO05D001376 3.1e-09 66.2 75 57.3
CSS0013744 Camellia sinensis var. sinensis HOM05D001419 ORTHO05D001376 4.0e-09 65.9 122 41.8
CSS0018390 Camellia sinensis var. sinensis HOM05D001419 ORTHO05D001376 4.0e-09 65.9 122 41.8
Gohir.A12G193300 Gossypium hirsutum HOM05D001419 ORTHO05D001376 4.0e-09 65.9 72 54.2
Potri.012G105400 Populus trichocarpa HOM05D001419 ORTHO05D001376 4.0e-09 65.9 86 51.2
FAN08G1260 Fragaria x ananassa HOM05D001419 ORTHO05D001376 5.2e-09 65.5 167 37.7
Nitab4.5_0002046g0180 Nicotiana tabacum HOM05D001419 ORTHO05D001376 5.2e-09 65.5 161 37.3
COL.COLO4_16706 Corchorus olitorius HOM05D001419 ORTHO05D001376 6.8e-09 65.1 133 39.8
RcHm_v2.0_Chr7g0188961 Rosa chinensis HOM05D001419 ORTHO05D001376 6.8e-09 65.1 166 36.7
Cc04_g05950 Coffea canephora HOM05D001419 ORTHO05D001376 8.9e-09 64.7 77 54.5
FAN13G1977 Fragaria x ananassa HOM05D001419 ORTHO05D001376 8.9e-09 64.7 183 36.1
FAN18G1957 Fragaria x ananassa HOM05D001419 ORTHO05D001376 1.5e-08 63.9 183 36.1
QL10p000923 Quercus lobata HOM05D001419 ORTHO05D001376 1.5e-08 63.9 154 37.7
CSS0017420 Camellia sinensis var. sinensis HOM05D001419 ORTHO05D001376 2.0e-08 63.5 165 40.0
Lsat_1_v5_gn_1_32281 Lactuca sativa HOM05D001419 ORTHO05D001376 2.0e-08 63.5 79 49.4
Dinv23208 Davidia involucrata HOM05D001419 ORTHO05D001376 2.6e-08 63.2 141 36.2
FAN04G1873 Fragaria x ananassa HOM05D001419 ORTHO05D001376 2.6e-08 63.2 167 37.1
Psat6g106800 Pisum sativum HOM05D001419 ORTHO05D001376 2.6e-08 63.2 78 53.8
TAR629G0843 Trochodendron aralioides HOM05D001419 ORTHO05D001376 2.6e-08 63.2 128 39.8
TPR.G21593 Trifolium pratense HOM05D001419 ORTHO05D001376 4.4e-08 62.4 91 48.4
arahy.Tifrunner.gnm1.ann1.EB1MMR Arachis hypogaea HOM05D001419 ORTHO05D001376 5.8e-08 62.0 168 36.9
arahy.Tifrunner.gnm1.ann1.GTVX5U Arachis hypogaea HOM05D001419 ORTHO05D001376 5.8e-08 62.0 180 34.4
Sabra15G0124300 Salix brachista HOM05D001419 ORTHO05D001376 5.8e-08 62.0 112 42.0
Aqoxy3G01878 Aquilegia oxysepala HOM05D001419 ORTHO05D001376 7.5e-08 61.6 118 42.4
Peaxi162Scf00314g00524 Petunia axillaris HOM05D001419 ORTHO05D001376 7.5e-08 61.6 152 37.5
CAN.G843.26 Capsicum annuum HOM05D001419 ORTHO05D001376 9.8e-08 61.2 163 36.2
Eucgr.B00074 Eucalyptus grandis HOM05D001419 ORTHO05D001376 1.3e-07 60.8 123 39.0
Nn4g22170 Nelumbo nucifera HOM05D001419 ORTHO05D001376 1.7e-07 60.5 141 38.3
PGR119G0468 Punica granatum HOM05D001419 ORTHO05D001376 1.7e-07 60.5 70 52.9
MSTRG.22857 Avicennia marina HOM05D001419 ORTHO05D001376 2.2e-07 60.1 96 51.0
Medtr3g498775 Medicago truncatula HOM05D001419 ORTHO05D001376 2.9e-07 59.7 83 49.4
FvH4_1g14570 Fragaria vesca HOM05D001419 ORTHO05D016050 3.7e-07 59.3 89 49.4
SalBow7G3881 Salvia bowleyana HOM05D001419 ORTHO05D001376 3.7e-07 59.3 155 34.2
ClCG03G004000 Citrullus lanatus HOM05D001419 ORTHO05D001376 4.9e-07 58.9 186 33.9
Lj1g0002101 Lotus japonicus HOM05D001419 ORTHO05D001376 6.4e-07 58.5 52 63.5
Solyc03g118390.3 Solanum lycopersicum HOM05D001419 ORTHO05D001376 6.4e-07 58.5 174 32.8
Sopen03g037290 Solanum pennellii HOM05D001419 ORTHO05D001376 6.4e-07 58.5 163 35.6
Phvul.009G164500 Phaseolus vulgaris HOM05D001419 ORTHO05D001376 8.3e-07 58.2 79 50.6
Potri.015G104600 Populus trichocarpa HOM05D001419 ORTHO05D001376 1.1e-06 57.8 86 48.8
Sabra12G0077800 Salix brachista HOM05D001419 ORTHO05D001376 1.1e-06 57.8 210 32.9
GSVIVG01004935001 Vitis vinifera HOM05D001419 ORTHO05D001376 1.1e-06 57.8 125 36.8
SGA_v2.0_scaffold40G15618 Striga asiatica HOM05D001419 ORTHO05D001376 1.4e-06 57.4 81 45.7
HanXRQChr02g0034241 Helianthus annuus HOM05D001419 ORTHO05D001376 1.9e-06 57.0 103 50.5
Lalb_Chr08g0237471 Lupinus albus HOM05D001419 ORTHO05D001376 1.9e-06 57.0 92 42.4
THA.LOC104818173 Tarenaya hassleriana HOM05D001419 ORTHO05D001376 1.9e-06 57.0 108 41.7
vmacro19164 Vaccinium macrocarpon HOM05D001419 ORTHO05D001376 1.9e-06 57.0 140 36.4
CSS0009563 Camellia sinensis var. sinensis HOM05D001419 ORTHO05D001376 2.4e-06 56.6 139 38.1
CiPaw.05G102800 Carya illinoinensis HOM05D001419 ORTHO05D001376 2.4e-06 56.6 169 36.1
Glyma.04G200100 Glycine max HOM05D001419 ORTHO05D001376 2.4e-06 56.6 46 65.2
AT5G23700 Arabidopsis thaliana HOM05D001419 ORTHO05D001376 3.2e-06 56.2 123 42.3
arahy.Tifrunner.gnm1.ann1.VH54GQ Arachis hypogaea HOM05D001419 ORTHO05D001376 4.1e-06 55.8 180 32.8
CsaV3_1G009890 Cucumis sativus L. HOM05D001419 ORTHO05D001376 4.1e-06 55.8 147 36.7
Glyma.06G165500 Glycine max HOM05D001419 ORTHO05D001376 7.0e-06 55.1 60 55.0
Carub.0006s2145 Capsella rubella HOM05D001419 ORTHO05D001376 9.2e-06 54.7 113 40.7
DCAR_016354 Daucus carota HOM05D001419 ORTHO05D001376 9.2e-06 54.7 142 34.5


User provided reference genes

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