Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB01g01919 Brassica carinata HOM05D004754 ORTHO05D005566 5.5e-176 620.9 328 100.0
C09p03030 Brassica napus HOM05D004754 ORTHO05D005566 1.4e-155 553.1 329 83.0
BcaC04g23945 Brassica carinata HOM05D004754 ORTHO05D005566 2.4e-155 552.4 329 83.0
BolC9t53233H Brassica oleracea HOM05D004754 ORTHO05D005566 2.7e-154 548.9 333 89.2
A09p02940 Brassica napus HOM05D004754 ORTHO05D005566 1.0e-153 547.0 330 87.9
BraA09t35937Z Brassica rapa HOM05D004754 ORTHO05D005566 1.0e-153 547.0 330 87.9
Sp6g03640 Schrenkiella parvula HOM05D004754 ORTHO05D005566 5.0e-153 544.7 329 80.5
CARHR252140 Cardamine hirsuta HOM05D004754 ORTHO05D005566 8.3e-148 527.3 330 77.6
Carub.0006s3335 Capsella rubella HOM05D004754 ORTHO05D005566 1.8e-147 526.2 328 78.4
AL6G49030 Arabidopsis lyrata HOM05D004754 ORTHO05D005566 1.0e-145 520.4 329 76.3
AT4G05440 Arabidopsis thaliana HOM05D004754 ORTHO05D005566 8.8e-142 507.3 329 75.4
Thhalv10028820m.g Eutrema salsugineum HOM05D004754 ORTHO05D005566 1.1e-136 490.3 327 73.1
THA.LOC104812357 Tarenaya hassleriana HOM05D004754 ORTHO05D005566 1.7e-129 466.5 329 68.7
Gorai.004G208700 Gossypium raimondii HOM05D004754 ORTHO05D005566 2.6e-125 452.6 328 66.8
RcHm_v2.0_Chr5g0052721 Rosa chinensis HOM05D004754 ORTHO05D005566 2.6e-125 452.6 331 65.6
Gohir.A08G179300 Gossypium hirsutum HOM05D004754 ORTHO05D005566 7.5e-125 451.1 328 66.8
Gohir.D08G197900 Gossypium hirsutum HOM05D004754 ORTHO05D005566 2.9e-124 449.1 328 66.5
QL08p010099 Quercus lobata HOM05D004754 ORTHO05D005566 2.9e-124 449.1 329 64.7
RcHm_v2.0_Chr5g0015381 Rosa chinensis HOM05D004754 ORTHO05D005566 2.9e-124 449.1 331 65.6
COL.COLO4_17670 Corchorus olitorius HOM05D004754 ORTHO05D005566 8.3e-124 447.6 326 65.6
MD17G1076300 Malus domestica HOM05D004754 ORTHO05D005566 2.4e-123 446.0 329 64.4
Thecc.02G011000 Theobroma cacao HOM05D004754 ORTHO05D005566 2.4e-123 446.0 326 66.9
FvH4_2g14961 Fragaria vesca HOM05D004754 ORTHO05D005566 1.6e-122 443.4 331 64.0
Duzib248G0043 Durio zibethinus HOM05D004754 ORTHO05D005566 2.7e-122 442.6 328 65.5
CANSAT64G0220 Cannabis sativa HOM05D004754 ORTHO05D005566 4.6e-122 441.8 328 64.3
FAN15G1860 Fragaria x ananassa HOM05D004754 ORTHO05D005566 6.0e-122 441.4 331 63.4
Prupe.1G099600 Prunus persica HOM05D004754 ORTHO05D005566 6.0e-122 441.4 330 62.4
TPR.G33233 Trifolium pratense HOM05D004754 ORTHO05D005566 6.0e-122 441.4 333 68.5
Ca_02551_v3 Cicer arietinum L. HOM05D004754 ORTHO05D005566 7.8e-122 441.0 330 63.6
Cfa020535 Carpinus fangiana HOM05D004754 ORTHO05D005566 2.3e-121 439.5 329 63.8
FAN24G0458 Fragaria x ananassa HOM05D004754 ORTHO05D005566 2.3e-121 439.5 331 63.7
Psat5g233520 Pisum sativum HOM05D004754 ORTHO05D005566 5.0e-121 438.3 329 64.4
QL05p054004 Quercus lobata HOM05D004754 ORTHO05D005566 5.0e-121 438.3 329 63.5
Sed0000755 Sechium edule HOM05D004754 ORTHO05D005566 6.6e-121 438.0 326 64.4
Cpa.g.sc17.70 Carica papaya HOM05D004754 ORTHO05D005566 8.6e-121 437.6 329 64.4
Gorai.013G128400 Gossypium raimondii HOM05D004754 ORTHO05D005566 8.6e-121 437.6 328 64.9
Prupe.3G237900 Prunus persica HOM05D004754 ORTHO05D005566 8.6e-121 437.6 330 62.7
Atru.chr10.946 Acer truncatum HOM05D004754 ORTHO05D005566 1.1e-120 437.2 327 64.2
Dinv32196 Davidia involucrata HOM05D004754 ORTHO05D005566 1.5e-120 436.8 330 64.8
Aa31LG9G9140 Aethionema arabicum HOM05D004754 ORTHO05D005566 7.3e-120 434.5 307 68.7
CSS0007960 Camellia sinensis var. sinensis HOM05D004754 ORTHO05D005566 9.5e-120 434.1 329 64.7
CSS0038452 Camellia sinensis var. sinensis HOM05D004754 ORTHO05D005566 9.5e-120 434.1 329 64.7
Ca_14146_v3 Cicer arietinum L. HOM05D004754 ORTHO05D005566 9.5e-120 434.1 326 63.8
Lj1P1166T28 Lonicera japonica HOM05D004754 ORTHO05D005566 1.6e-119 433.3 330 61.5
Sc12g0003070 Simmondsia chinensis HOM05D004754 ORTHO05D005566 1.6e-119 433.3 326 63.8
CsaV3_1G039230 Cucumis sativus L. HOM05D004754 ORTHO05D005566 2.8e-119 432.6 326 62.0
Glyma.14G055800 Glycine max HOM05D004754 ORTHO05D005566 2.8e-119 432.6 329 62.6
ECA240G2987 Erigeron canadensis HOM05D004754 ORTHO05D005566 3.6e-119 432.2 330 63.0
Lj2g0020778 Lotus japonicus HOM05D004754 ORTHO05D005566 3.6e-119 432.2 328 63.4
Medtr0393s0030 Medicago truncatula HOM05D004754 ORTHO05D005566 3.6e-119 432.2 331 63.1
Psat0s5166g0080 Pisum sativum HOM05D004754 ORTHO05D005566 3.6e-119 432.2 329 62.6
SalBow6G1352 Salvia bowleyana HOM05D004754 ORTHO05D005566 6.2e-119 431.4 326 62.3
MSTRG.16715 Avicennia marina HOM05D004754 ORTHO05D005566 8.1e-119 431.0 329 63.5
ClCG03G006380 Citrullus lanatus HOM05D004754 ORTHO05D005566 8.1e-119 431.0 326 62.3
MELO3C015347.2 Cucumis melo HOM05D004754 ORTHO05D005566 8.1e-119 431.0 326 62.3
Hma1.2p1_1418F.1_g282250 Hydrangea macrophylla HOM05D004754 ORTHO05D005566 8.1e-119 431.0 327 63.0
Medtr3g010310 Medicago truncatula HOM05D004754 ORTHO05D005566 8.1e-119 431.0 331 63.1
PGR031G3887 Punica granatum HOM05D004754 ORTHO05D005566 8.1e-119 431.0 324 63.9
vmacro03406 Vaccinium macrocarpon HOM05D004754 ORTHO05D005566 1.8e-118 429.9 328 62.8
AUR62008508 Chenopodium quinoa HOM05D004754 ORTHO05D005566 2.3e-118 429.5 328 61.6
Manes.10G102700 Manihot esculenta HOM05D004754 ORTHO05D005566 2.3e-118 429.5 328 62.8
VMungo1309G0019 Vigna mungo HOM05D004754 ORTHO05D005566 4.0e-118 428.7 328 62.5
TWI53G1117 Tripterygium wilfordii HOM05D004754 ORTHO05D005566 5.2e-118 428.3 329 62.0
Phvul.009G217100 Phaseolus vulgaris HOM05D004754 ORTHO05D005566 1.2e-117 427.2 329 62.0
Eucgr.K03201 Eucalyptus grandis HOM05D004754 ORTHO05D005566 1.5e-117 426.8 326 62.3
Potri.017G048600 Populus trichocarpa HOM05D004754 ORTHO05D005566 1.5e-117 426.8 329 63.2
EL10Ac5g11113 Beta vulgaris HOM05D004754 ORTHO05D005566 2.0e-117 426.4 328 63.1
CiPaw.12G121800 Carya illinoinensis HOM05D004754 ORTHO05D005566 4.4e-117 425.2 329 61.7
Atru.chr10.952 Acer truncatum HOM05D004754 ORTHO05D005566 1.7e-116 423.3 327 63.3
Migut.B00386 Erythranthe guttata HOM05D004754 ORTHO05D005566 1.7e-116 423.3 331 64.4
Dinv15895 Davidia involucrata HOM05D004754 ORTHO05D005566 3.7e-116 422.2 329 62.3
Ah.02g113940 Amaranthus hybridus HOM05D004754 ORTHO05D005566 8.3e-116 421.0 328 60.4
Hund19582 Selenicereus undatus HOM05D004754 ORTHO05D005566 8.3e-116 421.0 328 61.3
Sopen01g049820 Solanum pennellii HOM05D004754 ORTHO05D005566 1.4e-115 420.2 326 62.0
DCAR_005794 Daucus carota HOM05D004754 ORTHO05D005566 1.9e-115 419.9 329 61.4
Eucgr.E02475 Eucalyptus grandis HOM05D004754 ORTHO05D005566 1.9e-115 419.9 326 62.0
Rhsim13G0119600 Rhododendron simsii HOM05D004754 ORTHO05D005566 1.9e-115 419.9 328 61.6
PSO210G6921 Papaver somniferum HOM05D004754 ORTHO05D005566 4.1e-115 418.7 330 59.7
Potri.007G112300 Populus trichocarpa HOM05D004754 ORTHO05D005566 4.1e-115 418.7 329 61.1
CAN.G1231.9 Capsicum annuum HOM05D004754 ORTHO05D005566 5.4e-115 418.3 329 61.7
CAN.G3385.2 Capsicum annuum HOM05D004754 ORTHO05D005566 5.4e-115 418.3 329 61.7
PSO210G1456 Papaver somniferum HOM05D004754 ORTHO05D005566 5.4e-115 418.3 330 59.4
Ciclev10015850m.g Citrus clementina HOM05D004754 ORTHO05D005566 9.2e-115 417.5 329 61.4
Lalb_Chr12g0204311 Lupinus albus HOM05D004754 ORTHO05D005566 9.2e-115 417.5 329 60.5
Manes.07G037300 Manihot esculenta HOM05D004754 ORTHO05D005566 1.2e-114 417.2 328 61.6
Rhsim01G0266600 Rhododendron simsii HOM05D004754 ORTHO05D005566 2.1e-114 416.4 328 61.3
Sabra07G0091800 Salix brachista HOM05D004754 ORTHO05D005566 2.1e-114 416.4 329 60.5
AUR62001036 Chenopodium quinoa HOM05D004754 ORTHO05D005566 2.7e-114 416.0 328 64.0
TAR624G1057 Trochodendron aralioides HOM05D004754 ORTHO05D005566 6.0e-114 414.8 329 61.4
Oeu010398.1 Olea europaea HOM05D004754 ORTHO05D005566 7.8e-114 414.5 329 61.4
Nitab4.5_0005392g0050 Nicotiana tabacum HOM05D004754 ORTHO05D005566 3.0e-113 412.5 329 60.8
HanXRQChr12g0360561 Helianthus annuus HOM05D004754 ORTHO05D005566 1.1e-112 410.6 328 64.0
Oeu018596.1 Olea europaea HOM05D004754 ORTHO05D005566 1.9e-112 409.8 329 61.7
TAR626G0708 Trochodendron aralioides HOM05D004754 ORTHO05D005566 1.9e-112 409.8 326 60.7
Nitab4.5_0002815g0050 Nicotiana tabacum HOM05D004754 ORTHO05D005566 3.3e-112 409.1 329 60.5
Cc02_g19240 Coffea canephora HOM05D004754 ORTHO05D005566 4.3e-112 408.7 329 59.0
SGA_v2.0_scaffold172G38987 Striga asiatica HOM05D004754 ORTHO05D005566 9.5e-112 407.5 331 60.4
MBI10_g08558_MAGBIO Magnolia biondii HOM05D004754 ORTHO05D005566 1.6e-111 406.8 330 60.6
AUR62004920 Chenopodium quinoa HOM05D004754 ORTHO05D005566 2.1e-111 406.4 328 61.9
Lsat_1_v5_gn_9_95240 Lactuca sativa HOM05D004754 ORTHO05D005566 8.1e-111 404.4 332 63.6
MBI09_g11913_MAGBIO Magnolia biondii HOM05D004754 ORTHO05D005566 8.1e-111 404.4 335 64.2
unitig_21.g20734 Utricularia gibba HOM05D004754 ORTHO05D005566 1.4e-110 403.7 330 59.1
Aqoxy7G03057 Aquilegia oxysepala HOM05D004754 ORTHO05D005566 9.9e-109 397.5 327 59.6
Haze_09498 Corylus avellana HOM05D004754 ORTHO05D005566 1.9e-107 393.3 338 57.1
vmacro08577 Vaccinium macrocarpon HOM05D004754 ORTHO05D005566 7.8e-106 387.9 328 59.5
Lalb_Chr12g0204271 Lupinus albus HOM05D004754 ORTHO05D005566 1.7e-105 386.7 329 58.1
MD09G1087500 Malus domestica HOM05D004754 ORTHO05D005566 1.1e-104 384.0 327 57.8
GSVIVG01027347001 Vitis vinifera HOM05D004754 ORTHO05D005566 8.1e-103 377.9 326 58.3
CDE02G1350 Ceratophyllum demersum HOM05D004754 ORTHO05D005566 5.2e-102 375.2 322 56.2
GSVIVG01021588001 Vitis vinifera HOM05D004754 ORTHO05D005566 5.8e-101 371.7 326 57.4
HanXRQChr03g0076141 Helianthus annuus HOM05D004754 ORTHO05D005566 7.6e-101 371.3 316 57.9
PGSC0003DMG400025770 Solanum tuberosum HOM05D004754 ORTHO05D005566 1.7e-100 370.2 300 60.0
AL6G49110 Arabidopsis lyrata HOM05D004754 ORTHO05D005566 2.4e-99 366.3 271 67.2
ATR0584G072 Amborella trichopoda HOM05D004754 ORTHO05D005566 3.2e-99 365.9 377 49.6
Lsat_1_v5_gn_9_95201 Lactuca sativa HOM05D004754 ORTHO05D005566 5.4e-99 365.2 328 60.4
RcHm_v2.0_Chr5g0052651 Rosa chinensis HOM05D004754 ORTHO05D005566 1.2e-98 364.0 291 61.9
PSO675G6933 Papaver somniferum HOM05D004754 ORTHO05D005566 2.1e-98 363.2 290 60.3
Sc12g0003000 Simmondsia chinensis HOM05D004754 ORTHO05D005566 2.7e-90 336.3 238 67.6
AUR62021582 Chenopodium quinoa HOM05D004754 ORTHO05D005566 1.9e-88 330.1 328 51.2
SMO144G0026 Selaginella moellendorffii HOM05D004754 ORTHO05D005566 4.9e-84 315.5 340 51.5
Actinidia13483 Actinidia chinensis HOM05D004754 ORTHO05D005566 3.9e-81 305.8 261 58.2
AagrBONN_evm.TU.Sc2ySwM_344.1746 Anthoceros agrestis HOM05D004754 ORTHO05D005566 7.4e-80 301.6 375 44.8
AagrBONN_evm.TU.Sc2ySwM_228.5754 Anthoceros agrestis HOM05D004754 ORTHO05D005566 2.8e-79 299.7 336 47.0
Pp3c20_22950 Physcomitrium patens HOM05D004754 ORTHO05D005566 2.6e-77 293.1 338 45.6
Gohir.D13G114400 Gossypium hirsutum HOM05D004754 ORTHO05D005566 1.9e-72 276.9 210 63.8
Medtr2g048690 Medicago truncatula HOM05D004754 ORTHO05D005566 3.3e-72 276.2 313 47.9
Mapoly0049s0079 Marchantia polymorpha HOM05D004754 ORTHO05D005566 8.2e-71 271.6 391 42.5
Atru.chr10.956 Acer truncatum HOM05D004754 ORTHO05D005566 2.6e-69 266.5 218 61.5
SEGI_36860 Sequoiadendron giganteum HOM05D004754 ORTHO05D005566 7.6e-69 265.0 328 45.7
Zm00001eb126310 Zea mays HOM05D004754 ORTHO05D005566 1.7e-68 263.8 400 38.2
Haze_09496 Corylus avellana HOM05D004754 ORTHO05D005566 6.9e-62 241.9 251 49.4
Sc10g0000250 Simmondsia chinensis HOM05D004754 ORTHO05D005566 1.7e-60 237.3 179 60.9
CBR_g50844 Chara braunii HOM05D004754 ORTHO05D005566 1.8e-54 217.2 187 52.4
PRCOL_00002688 Prasinoderma coloniale HOM05D004754 ORTHO05D005566 3.8e-52 209.5 369 39.3
QL05p054023 Quercus lobata HOM05D004754 ORTHO05D005566 7.9e-50 201.8 218 48.2
TPR.G5080 Trifolium pratense HOM05D004754 ORTHO05D005566 6.3e-47 192.2 147 63.3
MCO03G595 Micromonas commoda HOM05D004754 ORTHO05D005566 3.2e-43 179.9 247 39.3
Migut.N02733 Erythranthe guttata HOM05D004754 ORTHO05D005566 1.2e-42 177.9 143 61.5
HanXRQChr04g0094771 Helianthus annuus HOM05D004754 ORTHO05D005566 9.7e-40 168.3 150 53.3
HanXRQChr11g0343411 Helianthus annuus HOM05D004754 ORTHO05D005566 1.0e-36 158.3 136 55.1
HanXRQChr11g0343421 Helianthus annuus HOM05D004754 ORTHO05D005566 1.0e-36 158.3 136 55.1
ECA234G3378 Erigeron canadensis HOM05D004754 ORTHO05D000282 2.3e-33 147.1 122 56.6
VMungo1309G1961 Vigna mungo HOM05D004754 ORTHO05D005566 1.5e-32 144.4 326 31.6
Glyma.02G261300 Glycine max HOM05D004754 ORTHO05D005566 9.8e-24 115.2 66 75.8
Medtr8g072370 Medicago truncatula HOM05D004754 ORTHO05D005566 2.4e-22 110.5 152 42.1
Psat5g233560 Pisum sativum HOM05D004754 ORTHO05D005566 7.8e-21 105.5 110 49.1
Glyma.02G261200 Glycine max HOM05D004754 ORTHO05D005566 1.0e-20 105.1 90 56.7
Cre07.g312100 Chlamydomonas reinhardtii HOM05D004754 ORTHO05D005566 1.5e-19 101.3 271 28.8
HPP92_027351 Vanilla planifolia HOM05D004754 ORTHO05D005566 1.1e-14 85.1 75 52.0
Potri.017G049500 Populus trichocarpa HOM05D004754 ORTHO05D005566 4.7e-10 69.7 39 76.9
HPP92_027352 Vanilla planifolia HOM05D004754 ORTHO05D005566 2.2e-07 60.8 71 40.8
Potri.006G050600 Populus trichocarpa HOM05D004754 ORTHO05D005566 3.7e-07 60.1 51 60.8
Lj6C128T1 Lonicera japonica HOM05D004754 ORTHO05D005566 4.9e-07 59.7 68 42.6


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