Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB01g01876 Brassica carinata HOM05D006909 ORTHO05D008682 1.7e-35 152.1 79 100.0
A03p60540 Brassica napus HOM05D006909 ORTHO05D008682 1.4e-24 115.9 64 93.8
BcaNung01544 Brassica carinata HOM05D006909 ORTHO05D008682 1.7e-22 109.0 65 90.8
AL7G20960 Arabidopsis lyrata HOM05D006909 ORTHO05D008682 1.4e-21 105.9 64 85.9
AT4G31115 Arabidopsis thaliana HOM05D006909 ORTHO05D008682 4.2e-21 104.4 64 82.8
Thhalv10026012m.g Eutrema salsugineum HOM05D006909 ORTHO05D008682 7.1e-21 103.6 64 81.2
Sp7g28990 Schrenkiella parvula HOM05D006909 ORTHO05D008682 7.1e-21 103.6 64 82.8
Carub.0007s0942 Capsella rubella HOM05D006909 ORTHO05D008682 7.8e-20 100.1 64 79.7
CARHR239020 Cardamine hirsuta HOM05D006909 ORTHO05D008682 7.8e-20 100.1 70 75.7
Aa31LG2G19230 Aethionema arabicum HOM05D006909 ORTHO05D008682 3.6e-17 91.3 71 70.4
C07p58450 Brassica napus HOM05D006909 ORTHO05D008682 1.9e-13 79.0 64 67.2
BcaNung02722 Brassica carinata HOM05D006909 ORTHO05D008682 7.1e-13 77.0 64 65.6
BolC7t46299H Brassica oleracea HOM05D006909 ORTHO05D008682 7.1e-13 77.0 64 65.6
BraA03t15093Z Brassica rapa HOM05D006909 ORTHO05D008682 7.9e-12 73.6 38 92.1
THA.LOC104803576 Tarenaya hassleriana HOM05D006909 ORTHO05D008682 1.5e-10 69.3 70 60.0
Cpa.g.sc117.16 Carica papaya HOM05D006909 ORTHO05D008682 8.1e-09 63.5 66 53.0
Haze_21677 Corylus avellana HOM05D006909 ORTHO05D008682 9.0e-08 60.1 65 52.3
Cfa013243 Carpinus fangiana HOM05D006909 ORTHO05D008682 1.5e-07 59.3 65 52.3
Sed0021174 Sechium edule HOM05D006909 ORTHO05D008682 2.0e-07 58.9 65 52.3
Atru.chr7.2714 Acer truncatum HOM05D006909 ORTHO05D008682 4.5e-07 57.8 61 52.5
CiPaw.07G215300 Carya illinoinensis HOM05D006909 ORTHO05D008682 5.8e-07 57.4 65 49.2
Sed0010876 Sechium edule HOM05D006909 ORTHO05D008682 5.8e-07 57.4 60 51.7
VMungo1383G0586 Vigna mungo HOM05D006909 ORTHO05D008682 5.8e-07 57.4 65 52.3
COL.COLO4_18637 Corchorus olitorius HOM05D006909 ORTHO05D008682 7.6e-07 57.0 61 47.5
Dinv37475 Davidia involucrata HOM05D006909 ORTHO05D008682 7.6e-07 57.0 66 47.0
SalBow4G1645 Salvia bowleyana HOM05D006909 ORTHO05D008682 1.7e-06 55.8 67 46.3
Phvul.001G088800 Phaseolus vulgaris HOM05D006909 ORTHO05D008682 2.2e-06 55.5 65 50.8
Prupe.1G463100 Prunus persica HOM05D006909 ORTHO05D008682 2.9e-06 55.1 65 49.2
QL12p024608 Quercus lobata HOM05D006909 ORTHO05D008682 2.9e-06 55.1 66 50.0
Ciclev10009318m.g Citrus clementina HOM05D006909 ORTHO05D008682 3.8e-06 54.7 67 47.8
SalBow8G2968 Salvia bowleyana HOM05D006909 ORTHO05D008682 3.8e-06 54.7 61 49.2
Eucgr.C03977 Eucalyptus grandis HOM05D006909 ORTHO05D008682 4.9e-06 54.3 61 50.8
CsaV3_2G031550 Cucumis sativus L. HOM05D006909 ORTHO05D008682 6.4e-06 53.9 63 47.6


User provided reference genes

Program Settings