Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB01g01816 Brassica carinata HOM05D001498 ORTHO05D091844 8.4e-71 270.4 152 100.0
BcaB06g27273 Brassica carinata HOM05D001498 ORTHO05D094467 1.0e-60 236.9 152 90.8
BcaB06g26727 Brassica carinata HOM05D001498 ORTHO05D093134 2.2e-58 229.2 152 89.5
BcaC05g26789 Brassica carinata HOM05D001498 ORTHO05D094205 5.9e-48 194.5 130 90.0
BcaB07g33084 Brassica carinata HOM05D001498 ORTHO05D092207 2.1e-45 186.0 147 80.3
BcaB05g23244 Brassica carinata HOM05D001498 ORTHO05D095601 1.1e-43 180.3 152 76.3
BcaB07g33217 Brassica carinata HOM05D001498 ORTHO05D093085 2.6e-43 179.1 153 77.1
BcaB07g33317 Brassica carinata HOM05D001498 ORTHO05D096108 2.1e-29 132.9 152 63.2
BcaB06g26480 Brassica carinata HOM05D001498 ORTHO05D094428 2.6e-27 125.9 153 61.4
BcaB03g16286 Brassica carinata HOM05D001498 ORTHO05D093797 1.8e-25 119.8 152 57.9
BcaB01g01484 Brassica carinata HOM05D001498 ORTHO05D091615 3.8e-23 112.1 149 49.7
BcaB04g17776 Brassica carinata HOM05D001498 ORTHO05D092868 3.2e-22 109.0 170 48.2
BcaB07g32989 Brassica carinata HOM05D001498 ORTHO05D008559 1.2e-19 100.5 132 50.0
C01p30560 Brassica napus HOM05D001498 ORTHO05D011506 7.5e-19 97.8 158 48.7
BolC5t31266H Brassica oleracea HOM05D001498 ORTHO05D019959 7.5e-19 97.8 102 58.8
BcaB01g03187 Brassica carinata HOM05D001498 ORTHO05D090608 1.7e-18 96.7 101 61.4
BcaB03g16152 Brassica carinata HOM05D001498 ORTHO05D093112 4.9e-18 95.1 88 63.6
BcaB04g17678 Brassica carinata HOM05D001498 ORTHO05D094760 6.3e-18 94.7 101 59.4
BcaB07g33220 Brassica carinata HOM05D001498 ORTHO05D096371 1.1e-17 94.0 75 68.0
C01p38680 Brassica napus HOM05D001498 ORTHO05D011506 3.1e-17 92.4 172 43.6
BcaB05g23120 Brassica carinata HOM05D001498 ORTHO05D090647 4.1e-17 92.0 88 62.5
BolC9t54653H Brassica oleracea HOM05D001498 ORTHO05D011506 1.2e-16 90.5 172 43.0
BcaB07g32913 Brassica carinata HOM05D001498 ORTHO05D091922 1.6e-16 90.1 103 55.3
A08p09540 Brassica napus HOM05D001498 ORTHO05D011506 2.0e-16 89.7 172 43.0
BcaC09g48967 Brassica carinata HOM05D001498 ORTHO05D011506 4.5e-16 88.6 102 56.9
BcaC02g11926 Brassica carinata HOM05D001498 ORTHO05D019959 5.9e-16 88.2 95 52.6
C01p30520 Brassica napus HOM05D001498 ORTHO05D001885 5.9e-16 88.2 102 56.9
BolC3t19484H Brassica oleracea HOM05D001498 ORTHO05D011506 7.8e-16 87.8 167 41.9
BcaC04g20364 Brassica carinata HOM05D001498 ORTHO05D011506 1.0e-15 87.4 102 56.9
BcaB05g22943 Brassica carinata HOM05D001498 ORTHO05D096110 1.3e-15 87.0 75 68.0
BcaB05g23077 Brassica carinata HOM05D001498 ORTHO05D091436 1.3e-15 87.0 101 56.4
BolC1t02817H Brassica oleracea HOM05D001498 ORTHO05D106172 1.3e-15 87.0 102 56.9
C06p31050 Brassica napus HOM05D001498 ORTHO05D011506 1.7e-15 86.7 101 57.4
C01p48970 Brassica napus HOM05D001498 ORTHO05D011506 2.3e-15 86.3 95 61.1
C04p21380 Brassica napus HOM05D001498 ORTHO05D013028 2.3e-15 86.3 146 45.2
C08p17880 Brassica napus HOM05D001498 ORTHO05D001885 2.3e-15 86.3 146 45.2
BcaB06g27205 Brassica carinata HOM05D001498 ORTHO05D091204 2.9e-15 85.9 76 59.2
BcaB07g33315 Brassica carinata HOM05D001498 ORTHO05D091495 2.9e-15 85.9 101 54.5
A08p07550 Brassica napus HOM05D001498 ORTHO05D011506 2.9e-15 85.9 146 45.2
C03p66370 Brassica napus HOM05D001498 ORTHO05D011506 2.9e-15 85.9 102 56.9
BolC1t03827H Brassica oleracea HOM05D001498 ORTHO05D011506 2.9e-15 85.9 147 46.3
BcaB02g11279 Brassica carinata HOM05D001498 ORTHO05D095830 3.8e-15 85.5 85 57.6
C07p49110 Brassica napus HOM05D001498 ORTHO05D097837 3.8e-15 85.5 146 44.5
C09p17600 Brassica napus HOM05D001498 ORTHO05D011506 3.8e-15 85.5 146 45.2
BcaB07g33085 Brassica carinata HOM05D001498 ORTHO05D095625 6.6e-15 84.7 154 43.5
C01p44920 Brassica napus HOM05D001498 ORTHO05D011506 6.6e-15 84.7 146 44.5
C09p21170 Brassica napus HOM05D001498 ORTHO05D011506 6.6e-15 84.7 172 41.3
C09p16580 Brassica napus HOM05D001498 ORTHO05D011506 8.6e-15 84.3 146 44.5
BraA08t32774Z Brassica rapa HOM05D001498 ORTHO05D001885 8.6e-15 84.3 146 44.5
C03p56230 Brassica napus HOM05D001498 ORTHO05D001885 1.5e-14 83.6 171 42.7
C02p52020 Brassica napus HOM05D001498 ORTHO05D011506 1.9e-14 83.2 146 45.2
BolC2t11288H Brassica oleracea HOM05D001498 ORTHO05D011506 1.9e-14 83.2 146 45.2
BolC9t55019H Brassica oleracea HOM05D001498 ORTHO05D011506 1.9e-14 83.2 172 40.7
BcaC07g38657 Brassica carinata HOM05D001498 ORTHO05D011506 2.5e-14 82.8 140 45.7
A03p54380 Brassica napus HOM05D001498 ORTHO05D011506 2.5e-14 82.8 172 41.9
A08p06060 Brassica napus HOM05D001498 ORTHO05D011506 2.5e-14 82.8 146 44.5
BolC8t49067H Brassica oleracea HOM05D001498 ORTHO05D011506 2.5e-14 82.8 140 45.7
BcaB04g18314 Brassica carinata HOM05D001498 ORTHO05D095953 3.3e-14 82.4 73 64.4
A01p28560 Brassica napus HOM05D001498 ORTHO05D021639 3.3e-14 82.4 73 67.1
BolC3t17911H Brassica oleracea HOM05D001498 ORTHO05D008559 3.3e-14 82.4 146 44.5
BcaB01g01309 Brassica carinata HOM05D001498 ORTHO05D091216 4.3e-14 82.0 147 49.0
BcaC02g09114 Brassica carinata HOM05D001498 ORTHO05D011506 4.3e-14 82.0 146 43.8
C04p36710 Brassica napus HOM05D001498 ORTHO05D001885 4.3e-14 82.0 140 45.0
BcaB08g35016 Brassica carinata HOM05D001498 ORTHO05D092631 5.6e-14 81.6 101 52.5
BcaC08g44373 Brassica carinata HOM05D001498 ORTHO05D011506 5.6e-14 81.6 146 43.2
C09p27470 Brassica napus HOM05D001498 ORTHO05D011506 5.6e-14 81.6 102 53.9
BcaB01g01185 Brassica carinata HOM05D001498 ORTHO05D019959 9.5e-14 80.9 76 56.6
BcaB05g23246 Brassica carinata HOM05D001498 ORTHO05D090900 9.5e-14 80.9 75 64.0
BcaC05g27519 Brassica carinata HOM05D001498 ORTHO05D011506 9.5e-14 80.9 102 54.9
BolC8t47367H Brassica oleracea HOM05D001498 ORTHO05D011506 1.2e-13 80.5 146 43.2
BcaB06g26483 Brassica carinata HOM05D001498 ORTHO05D095599 2.1e-13 79.7 101 52.5
BcaB08g35076 Brassica carinata HOM05D001498 ORTHO05D021639 2.1e-13 79.7 102 53.9
BcaC06g36329 Brassica carinata HOM05D001498 ORTHO05D096194 2.1e-13 79.7 104 50.0
BcaB07g32352 Brassica carinata HOM05D001498 ORTHO05D021639 2.8e-13 79.3 102 53.9
C05p25290 Brassica napus HOM05D001498 ORTHO05D019959 2.8e-13 79.3 93 55.9
BolC9t57107H Brassica oleracea HOM05D001498 ORTHO05D016694 2.8e-13 79.3 73 61.6
BraA03t15290Z Brassica rapa HOM05D001498 ORTHO05D011506 3.6e-13 79.0 146 42.5
C02p53500 Brassica napus HOM05D001498 ORTHO05D001885 6.1e-13 78.2 146 43.2
C09p42290 Brassica napus HOM05D001498 ORTHO05D016694 6.1e-13 78.2 73 61.6
BcaB06g26755 Brassica carinata HOM05D001498 ORTHO05D092466 8.0e-13 77.8 102 52.9
BcaB06g25739 Brassica carinata HOM05D001498 ORTHO05D093323 1.0e-12 77.4 102 52.9
BcaB02g10765 Brassica carinata HOM05D001498 ORTHO05D095468 1.4e-12 77.0 97 52.6
BcaB06g25736 Brassica carinata HOM05D001498 ORTHO05D021639 1.8e-12 76.6 93 55.9
BcaB03g15933 Brassica carinata HOM05D001498 ORTHO05D021639 2.3e-12 76.3 102 52.0
BcaB04g18432 Brassica carinata HOM05D001498 ORTHO05D090882 2.3e-12 76.3 102 52.9
C07p06210 Brassica napus HOM05D001498 ORTHO05D032253 3.0e-12 75.9 77 57.1
BcaB08g35461 Brassica carinata HOM05D001498 ORTHO05D090491 4.0e-12 75.5 102 51.0
BcaC04g20545 Brassica carinata HOM05D001498 ORTHO05D016694 8.9e-12 74.3 96 51.0
BolC7t41038H Brassica oleracea HOM05D001498 ORTHO05D032253 8.9e-12 74.3 77 55.8
BcaB04g17490 Brassica carinata HOM05D001498 ORTHO05D019959 1.2e-11 73.9 73 53.4
BcaC06g35524 Brassica carinata HOM05D001498 ORTHO05D016694 1.2e-11 73.9 99 49.5
C03p66000 Brassica napus HOM05D001498 ORTHO05D001885 1.2e-11 73.9 168 41.1
BcaB07g33213 Brassica carinata HOM05D001498 ORTHO05D090837 1.5e-11 73.6 67 56.7
BcaC05g27663 Brassica carinata HOM05D001498 ORTHO05D090842 1.5e-11 73.6 68 60.3
BolC4t23616H Brassica oleracea HOM05D001498 ORTHO05D016694 1.5e-11 73.6 96 51.0
BcaC02g10287 Brassica carinata HOM05D001498 ORTHO05D093229 2.6e-11 72.8 102 49.0
BcaC04g19551 Brassica carinata HOM05D001498 ORTHO05D090991 2.6e-11 72.8 102 50.0
C04p20860 Brassica napus HOM05D001498 ORTHO05D016694 3.4e-11 72.4 96 51.0
BcaC08g44056 Brassica carinata HOM05D001498 ORTHO05D091470 4.4e-11 72.0 126 45.2
BcaC09g50109 Brassica carinata HOM05D001498 ORTHO05D093510 5.7e-11 71.6 61 67.2
BcaB02g11277 Brassica carinata HOM05D001498 ORTHO05D091891 7.5e-11 71.2 85 52.9
C04p09850 Brassica napus HOM05D001498 ORTHO05D101798 9.8e-11 70.9 55 61.8
BcaB01g01371 Brassica carinata HOM05D001498 ORTHO05D091381 1.3e-10 70.5 67 55.2
BcaB07g33754 Brassica carinata HOM05D001498 ORTHO05D092729 1.7e-10 70.1 59 66.1
BcaC02g11068 Brassica carinata HOM05D001498 ORTHO05D016694 1.7e-10 70.1 96 49.0
BcaC06g36230 Brassica carinata HOM05D001498 ORTHO05D032253 2.2e-10 69.7 72 56.9
BcaB03g16194 Brassica carinata HOM05D001498 ORTHO05D091006 3.7e-10 68.9 120 44.2
BcaB06g26473 Brassica carinata HOM05D001498 ORTHO05D091656 3.7e-10 68.9 81 56.8
BcaC04g20544 Brassica carinata HOM05D001498 ORTHO05D016694 3.7e-10 68.9 62 64.5
BcaB04g17703 Brassica carinata HOM05D001498 ORTHO05D021639 8.3e-10 67.8 93 49.5
BcaB05g22880 Brassica carinata HOM05D001498 ORTHO05D019959 8.3e-10 67.8 83 49.4
BcaB06g27027 Brassica carinata HOM05D001498 ORTHO05D092574 1.1e-09 67.4 75 57.3
BcaC02g09776 Brassica carinata HOM05D001498 ORTHO05D016036 1.1e-09 67.4 113 45.1
BcaB02g11218 Brassica carinata HOM05D001224 ORTHO05D010571 2.4e-09 66.2 87 46.0
BcaB02g11227 Brassica carinata HOM05D001498 ORTHO05D093168 3.2e-09 65.9 43 79.1
BcaB03g16298 Brassica carinata HOM05D001498 ORTHO05D095831 4.1e-09 65.5 101 49.5
BcaB06g26478 Brassica carinata HOM05D001498 ORTHO05D092859 5.4e-09 65.1 75 56.0
BcaB05g24509 Brassica carinata HOM05D001379 ORTHO05D001277 9.2e-09 64.3 64 54.7
BcaB03g16497 Brassica carinata HOM05D001498 ORTHO05D008559 1.2e-08 63.9 113 45.1
BcaC04g22591 Brassica carinata HOM05D001498 ORTHO05D095898 1.6e-08 63.5 73 57.5
BcaC03g14315 Brassica carinata HOM05D001498 ORTHO05D008559 3.5e-08 62.4 75 54.7
BcaB07g33140 Brassica carinata HOM05D015118 ORTHO05D019993 5.9e-08 61.6 153 34.6
BolC7t40930H Brassica oleracea HOM05D001379 ORTHO05D016694 7.8e-08 61.2 80 48.8
BcaC01g03078 Brassica carinata HOM05D001498 ORTHO05D008559 1.7e-07 60.1 126 43.7
BcaC03g13777 Brassica carinata HOM05D001498 ORTHO05D091916 1.7e-07 60.1 76 51.3
BcaC05g25872 Brassica carinata HOM05D001498 ORTHO05D011506 1.7e-07 60.1 166 37.3
BcaC06g36688 Brassica carinata HOM05D001498 ORTHO05D001885 2.3e-07 59.7 75 52.0
BcaB06g26678 Brassica carinata HOM05D001498 ORTHO05D094527 6.6e-07 58.2 73 49.3
BcaC06g35064 Brassica carinata HOM05D001498 ORTHO05D016694 1.9e-06 56.6 75 49.3


User provided reference genes

Program Settings