Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB01g01724 Brassica carinata HOM05D000589 ORTHO05D001885 4.5e-70 267.7 126 100.0
BolC1t00773H Brassica oleracea HOM05D000589 ORTHO05D001885 3.9e-37 158.3 79 94.9
BcaC08g45440 Brassica carinata HOM05D000589 ORTHO05D001885 6.6e-37 157.5 79 94.9
BcaB04g18869 Brassica carinata HOM05D000589 ORTHO05D001885 3.4e-33 145.2 79 88.6
BcaB04g19137 Brassica carinata HOM05D000589 ORTHO05D001885 3.2e-31 138.7 79 83.5
BcaB01g01294 Brassica carinata HOM05D000589 ORTHO05D001885 6.0e-30 134.4 101 69.3
BcaB03g16415 Brassica carinata HOM05D000589 ORTHO05D001885 4.3e-28 128.3 110 63.6
BcaC04g19449 Brassica carinata HOM05D000589 ORTHO05D001885 2.0e-25 119.4 99 60.6
BcaC04g22408 Brassica carinata HOM05D000589 ORTHO05D001885 1.7e-24 116.3 79 75.9
BcaB03g12711 Brassica carinata HOM05D000589 ORTHO05D001885 6.0e-22 107.8 95 58.9
BcaC05g28077 Brassica carinata HOM05D000589 ORTHO05D001885 2.3e-21 105.9 80 66.2
BolC5t32842H Brassica oleracea HOM05D000589 ORTHO05D001885 2.3e-21 105.9 80 66.2
BcaB01g03374 Brassica carinata HOM05D000589 ORTHO05D001885 3.0e-21 105.5 93 59.1
BcaNung02804 Brassica carinata HOM05D000589 ORTHO05D001885 6.6e-21 104.4 93 59.1
BcaNung03683 Brassica carinata HOM05D000589 ORTHO05D001885 2.5e-20 102.4 95 52.6
BolC8t49249H Brassica oleracea HOM05D000589 ORTHO05D001885 2.5e-20 102.4 104 58.7
BcaB05g21779 Brassica carinata HOM05D000589 ORTHO05D001885 4.3e-20 101.7 109 53.2
BcaC02g07926 Brassica carinata HOM05D000589 ORTHO05D001885 4.3e-20 101.7 93 58.1
BcaC01g00211 Brassica carinata HOM05D000589 ORTHO05D001885 5.6e-20 101.3 80 65.0
BcaC02g11017 Brassica carinata HOM05D000589 ORTHO05D001885 7.3e-20 100.9 80 63.8
BolC4t23737H Brassica oleracea HOM05D000589 ORTHO05D001885 7.3e-20 100.9 80 63.8
BcaB05g21670 Brassica carinata HOM05D000589 ORTHO05D001885 9.6e-20 100.5 80 63.8
BcaB05g25134 Brassica carinata HOM05D000589 ORTHO05D001885 2.1e-19 99.4 87 58.6
BraA06t25708Z Brassica rapa HOM05D000589 ORTHO05D001885 2.8e-19 99.0 79 63.3
BcaC02g10306 Brassica carinata HOM05D000589 ORTHO05D001885 3.6e-19 98.6 87 58.6
BraA09t39932Z Brassica rapa HOM05D000589 ORTHO05D001885 3.6e-19 98.6 80 63.8
BolC4t22259H Brassica oleracea HOM05D000589 ORTHO05D001885 6.2e-19 97.8 80 62.5
BcaB04g18594 Brassica carinata HOM05D000589 ORTHO05D001885 8.1e-19 97.4 83 60.2
BcaC05g26629 Brassica carinata HOM05D000589 ORTHO05D001885 8.1e-19 97.4 87 62.1
A09p69380 Brassica napus HOM05D000696 ORTHO05D001068 8.1e-19 97.4 80 62.5
BolC8t52930H Brassica oleracea HOM05D000696 ORTHO05D001068 8.1e-19 97.4 80 62.5
BcaB06g25902 Brassica carinata HOM05D000589 ORTHO05D001885 1.1e-18 97.1 87 58.6
BcaC04g23115 Brassica carinata HOM05D000589 ORTHO05D001885 1.1e-18 97.1 80 63.8
BcaC09g51394 Brassica carinata HOM05D000589 ORTHO05D001885 2.4e-18 95.9 84 61.9
BcaB06g28252 Brassica carinata HOM05D000589 ORTHO05D001885 5.3e-18 94.7 79 60.8
BcaNung03387 Brassica carinata HOM05D000169 ORTHO05D001885 9.0e-18 94.0 84 59.5
BolC9t53328H Brassica oleracea HOM05D000589 ORTHO05D001885 1.5e-17 93.2 80 62.5
BcaC06g33596 Brassica carinata HOM05D000589 ORTHO05D001885 2.6e-17 92.4 84 59.5
BcaC07g38698 Brassica carinata HOM05D000589 ORTHO05D001885 2.6e-17 92.4 97 54.6
BcaC09g48220 Brassica carinata HOM05D000589 ORTHO05D001885 2.6e-17 92.4 79 58.2
BolC8t49853H Brassica oleracea HOM05D000589 ORTHO05D001885 3.4e-17 92.0 80 58.8
BcaB01g03595 Brassica carinata HOM05D000589 ORTHO05D001885 4.4e-17 91.7 80 62.5
BcaC08g44836 Brassica carinata HOM05D000042 ORTHO05D000028 7.6e-17 90.9 80 58.8
BolC5t29856H Brassica oleracea HOM05D000589 ORTHO05D001885 9.9e-17 90.5 80 60.0
BcaC02g11269 Brassica carinata HOM05D000589 ORTHO05D001885 1.7e-16 89.7 81 58.0
BcaB04g18499 Brassica carinata HOM05D000589 ORTHO05D001885 2.2e-16 89.4 86 58.1
BcaC01g05715 Brassica carinata HOM05D000589 ORTHO05D001885 3.8e-16 88.6 80 60.0
BolC3t14691H Brassica oleracea HOM05D000589 ORTHO05D000401 3.8e-16 88.6 80 60.0
BcaC02g12561 Brassica carinata HOM05D000589 ORTHO05D001885 4.9e-16 88.2 84 57.1
BcaC05g24982 Brassica carinata HOM05D000589 ORTHO05D001885 4.9e-16 88.2 79 58.2
BcaB01g01212 Brassica carinata HOM05D000589 ORTHO05D001885 6.4e-16 87.8 77 58.4
BcaC04g23550 Brassica carinata HOM05D000589 ORTHO05D001885 6.4e-16 87.8 80 58.8
C07p49130 Brassica napus HOM05D000589 ORTHO05D001885 6.4e-16 87.8 80 60.0
BolC6t38683H Brassica oleracea HOM05D000589 ORTHO05D000401 6.4e-16 87.8 77 62.3
BcaC04g20325 Brassica carinata HOM05D000589 ORTHO05D001885 8.4e-16 87.4 81 59.3
BolC9t57367H Brassica oleracea HOM05D000589 ORTHO05D001885 8.4e-16 87.4 81 59.3
BcaC05g28515 Brassica carinata HOM05D000589 ORTHO05D001885 1.1e-15 87.0 80 61.2
BolC6t37831H Brassica oleracea HOM05D000589 ORTHO05D001885 1.1e-15 87.0 80 60.0
BolC2t12526H Brassica oleracea HOM05D000589 ORTHO05D001885 1.4e-15 86.7 107 46.7
BraA09t40543Z Brassica rapa HOM05D000589 ORTHO05D001885 1.4e-15 86.7 80 57.5
BcaC01g04079 Brassica carinata HOM05D000589 ORTHO05D001885 1.9e-15 86.3 95 53.7
BcaC03g14696 Brassica carinata HOM05D000589 ORTHO05D001885 1.9e-15 86.3 88 54.5
BcaC01g06283 Brassica carinata HOM05D000589 ORTHO05D001885 2.4e-15 85.9 80 58.8
BcaC02g07277 Brassica carinata HOM05D000589 ORTHO05D001885 2.4e-15 85.9 84 54.8
BcaC06g35518 Brassica carinata HOM05D000589 ORTHO05D001885 2.4e-15 85.9 84 56.0
BcaB03g15429 Brassica carinata HOM05D000589 ORTHO05D001885 3.2e-15 85.5 80 58.8
BolC2t08273H Brassica oleracea HOM05D000589 ORTHO05D000401 3.2e-15 85.5 80 58.8
BolC9t59088H Brassica oleracea HOM05D000589 ORTHO05D001885 3.2e-15 85.5 80 55.0
BcaC05g27662 Brassica carinata HOM05D000589 ORTHO05D001885 4.2e-15 85.1 69 60.9
BolC4t28438H Brassica oleracea HOM05D000589 ORTHO05D001885 4.2e-15 85.1 80 56.2
BcaC02g08266 Brassica carinata HOM05D000589 ORTHO05D001885 5.4e-15 84.7 112 50.0
BcaC04g18615 Brassica carinata HOM05D000589 ORTHO05D001885 7.1e-15 84.3 79 54.4
BcaC04g21855 Brassica carinata HOM05D000589 ORTHO05D001885 7.1e-15 84.3 80 53.8
BcaC08g47072 Brassica carinata HOM05D000589 ORTHO05D001885 7.1e-15 84.3 80 58.8
BcaC03g18390 Brassica carinata HOM05D000589 ORTHO05D001885 9.3e-15 84.0 76 55.3
BolC3t14145H Brassica oleracea HOM05D000589 ORTHO05D001885 9.3e-15 84.0 80 58.8
BcaB04g20840 Brassica carinata HOM05D000589 ORTHO05D001885 1.2e-14 83.6 76 56.6
BolC7t43381H Brassica oleracea HOM05D000589 ORTHO05D001885 1.2e-14 83.6 76 60.5
BcaC08g45778 Brassica carinata HOM05D000589 ORTHO05D001885 1.6e-14 83.2 77 62.3
BolC7t41896H Brassica oleracea HOM05D000589 ORTHO05D001885 2.1e-14 82.8 80 57.5
BcaC01g03361 Brassica carinata HOM05D000589 ORTHO05D001885 3.5e-14 82.0 80 58.8
BcaC04g20618 Brassica carinata HOM05D000506 ORTHO05D000369 3.5e-14 82.0 73 60.3
BolC3t21112H Brassica oleracea HOM05D000589 ORTHO05D001885 3.5e-14 82.0 80 58.8
BolC7t44689H Brassica oleracea HOM05D000589 ORTHO05D001885 3.5e-14 82.0 76 53.9
BcaC07g42449 Brassica carinata HOM05D000589 ORTHO05D001885 4.6e-14 81.6 80 58.8
BolC8t49094H Brassica oleracea HOM05D000589 ORTHO05D000401 4.6e-14 81.6 80 58.8
BcaC02g10575 Brassica carinata HOM05D000589 ORTHO05D001885 6.0e-14 81.3 77 54.5
BcaC05g25220 Brassica carinata HOM05D000589 ORTHO05D001885 1.3e-13 80.1 80 57.5
BolC3t19562H Brassica oleracea HOM05D000589 ORTHO05D001885 5.1e-13 78.2 79 57.0
BcaB05g24814 Brassica carinata HOM05D000589 ORTHO05D001885 6.6e-13 77.8 75 53.3
BolC9t53951H Brassica oleracea HOM05D000589 ORTHO05D001885 2.5e-12 75.9 73 53.4
BcaB02g11384 Brassica carinata HOM05D000589 ORTHO05D001885 4.3e-12 75.1 80 48.8
BcaB05g22640 Brassica carinata HOM05D000589 ORTHO05D001885 4.3e-12 75.1 96 49.0
BcaB07g32763 Brassica carinata HOM05D000589 ORTHO05D001885 4.3e-12 75.1 79 57.0
BcaB03g14716 Brassica carinata HOM05D000589 ORTHO05D001885 5.6e-12 74.7 80 48.8
BcaB05g21820 Brassica carinata HOM05D000589 ORTHO05D001885 7.4e-12 74.3 77 55.8
BcaC01g00022 Brassica carinata HOM05D000589 ORTHO05D001885 9.6e-12 73.9 51 72.5
BcaC05g24704 Brassica carinata HOM05D000589 ORTHO05D001885 9.6e-12 73.9 79 54.4
BcaC04g23266 Brassica carinata HOM05D000589 ORTHO05D001885 2.1e-11 72.8 80 52.5
BolC9t58427H Brassica oleracea HOM05D000589 ORTHO05D000401 2.8e-11 72.4 59 57.6
BcaC03g18139 Brassica carinata HOM05D000589 ORTHO05D001885 3.6e-11 72.0 83 50.6
BcaC02g12212 Brassica carinata HOM05D000589 ORTHO05D001885 1.1e-10 70.5 79 50.6
BcaC09g48351 Brassica carinata HOM05D000209 ORTHO05D001885 1.1e-10 70.5 79 50.6
BcaC05g25277 Brassica carinata HOM05D000589 ORTHO05D001885 1.8e-10 69.7 79 50.6
BcaC01g05444 Brassica carinata HOM05D000228 ORTHO05D001885 5.3e-10 68.2 54 61.1
BcaC08g46020 Brassica carinata HOM05D000589 ORTHO05D001885 6.9e-10 67.8 61 52.5
BolC5t33024H Brassica oleracea HOM05D000589 ORTHO05D001885 1.2e-09 67.0 84 50.0
BcaC05g29515 Brassica carinata HOM05D000589 ORTHO05D001885 1.5e-09 66.6 99 44.4
BcaC02g10987 Brassica carinata HOM05D000589 ORTHO05D001885 2.6e-09 65.9 80 52.5
BcaC08g43983 Brassica carinata HOM05D000589 ORTHO05D001885 3.4e-09 65.5 52 61.5
BolC6t36567H Brassica oleracea HOM05D000589 ORTHO05D001885 3.4e-09 65.5 52 61.5
BcaB05g24401 Brassica carinata HOM05D000589 ORTHO05D095590 4.5e-09 65.1 43 76.7
BolC2t11199H Brassica oleracea HOM05D000589 ORTHO05D001885 5.8e-09 64.7 79 48.1
BolC6t36507H Brassica oleracea HOM05D000589 ORTHO05D001885 9.9e-09 63.9 62 51.6
BcaC08g45938 Brassica carinata HOM05D000589 ORTHO05D001885 3.8e-08 62.0 57 52.6
BcaC08g45632 Brassica carinata HOM05D000589 ORTHO05D001885 2.4e-07 59.3 62 53.2
BolC5t30704H Brassica oleracea HOM05D000589 ORTHO05D000401 2.4e-07 59.3 52 57.7
BcaB06g29594 Brassica carinata HOM05D000589 ORTHO05D001885 3.2e-07 58.9 38 60.5
BcaB05g23757 Brassica carinata HOM05D000589 ORTHO05D001885 5.5e-07 58.2 77 36.4
BcaB07g32349 Brassica carinata HOM05D000589 ORTHO05D001885 7.1e-07 57.8 79 40.5
BcaB03g15329 Brassica carinata HOM05D000589 ORTHO05D001885 2.7e-06 55.8 75 42.7
BcaC04g21586 Brassica carinata HOM05D000589 ORTHO05D001885 3.5e-06 55.5 81 44.4
BraA03t15656Z Brassica rapa HOM05D000589 ORTHO05D001885 3.5e-06 55.5 59 52.5
BcaC05g28348 Brassica carinata HOM05D000589 ORTHO05D001885 6.0e-06 54.7 79 40.5


User provided reference genes

Program Settings