Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB01g01695 Brassica carinata HOM05D004703 ORTHO05D005801 1.3e-168 596.3 304 100.0
BcaC04g21182 Brassica carinata HOM05D004703 ORTHO05D005801 1.4e-157 559.7 307 92.8
C09p34490 Brassica napus HOM05D004703 ORTHO05D005801 1.4e-157 559.7 307 92.8
BolC9t56293H Brassica oleracea HOM05D004703 ORTHO05D005801 3.4e-156 555.1 308 92.5
Thhalv10028825m.g Eutrema salsugineum HOM05D004703 ORTHO05D005801 7.9e-145 517.3 306 88.6
CARHR254310 Cardamine hirsuta HOM05D004703 ORTHO05D005801 2.2e-142 509.2 306 87.3
AL6G46750 Arabidopsis lyrata HOM05D004703 ORTHO05D005801 5.0e-139 498.0 309 85.8
AT4G11980 Arabidopsis thaliana HOM05D004703 ORTHO05D005801 8.5e-139 497.3 304 87.5
Carub.0006s3108 Capsella rubella HOM05D004703 ORTHO05D005801 1.8e-136 489.6 306 83.7
Aa31LG9G10490 Aethionema arabicum HOM05D004703 ORTHO05D005801 1.6e-121 439.9 294 77.2
THA.LOC104806355 Tarenaya hassleriana HOM05D004703 ORTHO05D005801 1.2e-119 433.7 292 77.7
A09p27170 Brassica napus HOM05D004703 ORTHO05D005801 2.6e-119 432.6 264 84.8
COL.COLO4_23815 Corchorus olitorius HOM05D004703 ORTHO05D005801 1.0e-112 410.6 305 71.1
Atru.chr9.1491 Acer truncatum HOM05D004703 ORTHO05D005801 5.2e-112 408.3 300 73.3
Lj4g0003091 Lotus japonicus HOM05D004703 ORTHO05D005801 1.5e-111 406.8 298 70.5
Lalb_Chr05g0225211 Lupinus albus HOM05D004703 ORTHO05D005801 9.8e-111 404.1 272 74.3
VMungo0251G1252 Vigna mungo HOM05D004703 ORTHO05D005801 1.3e-110 403.7 277 73.3
TAR629G2760 Trochodendron aralioides HOM05D004703 ORTHO05D005801 2.2e-110 402.9 298 71.8
Ciclev10021310m.g Citrus clementina HOM05D004703 ORTHO05D005801 1.4e-109 400.2 304 71.4
Haze_09002 Corylus avellana HOM05D004703 ORTHO05D005801 5.4e-109 398.3 299 70.9
Phvul.003G216900 Phaseolus vulgaris HOM05D004703 ORTHO05D005801 2.0e-108 396.4 272 73.9
Ca_12294_v3 Cicer arietinum L. HOM05D004703 ORTHO05D005801 4.5e-108 395.2 274 74.1
Gohir.D09G188100 Gossypium hirsutum HOM05D004703 ORTHO05D005801 5.9e-108 394.8 304 68.1
Gorai.006G210900 Gossypium raimondii HOM05D004703 ORTHO05D005801 5.9e-108 394.8 304 67.8
PGR042G1634 Punica granatum HOM05D004703 ORTHO05D005801 5.9e-108 394.8 301 68.1
Eucgr.E00504 Eucalyptus grandis HOM05D004703 ORTHO05D005801 7.7e-108 394.4 275 73.5
FvH4_5g01080 Fragaria vesca HOM05D004703 ORTHO05D005801 7.7e-108 394.4 302 69.2
Migut.A00879 Erythranthe guttata HOM05D004703 ORTHO05D005801 1.0e-107 394.0 289 69.2
TWI15G0205 Tripterygium wilfordii HOM05D004703 ORTHO05D005801 1.0e-107 394.0 306 69.6
Gohir.A09G193900 Gossypium hirsutum HOM05D004703 ORTHO05D005801 1.3e-107 393.7 304 67.4
DCAR_006785 Daucus carota HOM05D004703 ORTHO05D005801 2.3e-107 392.9 271 73.8
Cc08_g13610 Coffea canephora HOM05D004703 ORTHO05D005801 2.9e-107 392.5 301 68.4
Prupe.5G084800 Prunus persica HOM05D004703 ORTHO05D005801 2.9e-107 392.5 296 70.3
Sed0028019 Sechium edule HOM05D004703 ORTHO05D005801 3.8e-107 392.1 272 73.5
Thecc.03G266100 Theobroma cacao HOM05D004703 ORTHO05D005801 5.0e-107 391.7 304 68.8
TPR.G37619 Trifolium pratense HOM05D004703 ORTHO05D005801 5.0e-107 391.7 272 73.5
QL12p016126 Quercus lobata HOM05D004703 ORTHO05D005801 6.6e-107 391.3 278 71.9
QL12p016291 Quercus lobata HOM05D004703 ORTHO05D005801 6.6e-107 391.3 278 71.9
Oeu001909.1 Olea europaea HOM05D004703 ORTHO05D005801 1.1e-106 390.6 268 71.6
Medtr4g101830 Medicago truncatula HOM05D004703 ORTHO05D005801 1.9e-106 389.8 273 73.6
CANSAT21G0478 Cannabis sativa HOM05D004703 ORTHO05D005801 2.5e-106 389.4 272 73.2
FAN18G3460 Fragaria x ananassa HOM05D004703 ORTHO05D005801 2.5e-106 389.4 322 65.2
Potri.003G118300 Populus trichocarpa HOM05D004703 ORTHO05D005801 2.5e-106 389.4 306 69.6
CiPaw.11G143800 Carya illinoinensis HOM05D004703 ORTHO05D005801 3.3e-106 389.0 268 71.6
Glyma.05G054900 Glycine max HOM05D004703 ORTHO05D005801 4.2e-106 388.7 272 72.8
FAN13G0401 Fragaria x ananassa HOM05D004703 ORTHO05D005801 5.5e-106 388.3 319 65.8
Glyma.05G054800 Glycine max HOM05D004703 ORTHO05D005801 5.5e-106 388.3 272 71.7
Hund14696 Selenicereus undatus HOM05D004703 ORTHO05D005801 5.5e-106 388.3 269 72.5
CsaV3_5G003450 Cucumis sativus L. HOM05D004703 ORTHO05D005801 6.1e-105 384.8 284 71.5
Hma1.2p1_0138F.1_g062820 Hydrangea macrophylla HOM05D004703 ORTHO05D005801 6.1e-105 384.8 263 74.1
PGSC0003DMG400003941 Solanum tuberosum HOM05D004703 ORTHO05D005801 6.1e-105 384.8 265 72.8
Actinidia14493 Actinidia chinensis HOM05D004703 ORTHO05D005801 8.0e-105 384.4 268 71.6
Dinv37721 Davidia involucrata HOM05D004703 ORTHO05D005801 8.0e-105 384.4 267 72.3
RcHm_v2.0_Chr7g0200241 Rosa chinensis HOM05D004703 ORTHO05D005801 1.8e-104 383.3 291 69.4
GSVIVG01019903001 Vitis vinifera HOM05D004703 ORTHO05D005801 2.3e-104 382.9 268 72.4
Duzib084G1157 Durio zibethinus HOM05D004703 ORTHO05D005801 3.0e-104 382.5 306 66.0
MD04G1073000 Malus domestica HOM05D004703 ORTHO05D005801 4.0e-104 382.1 272 71.7
AUR62017343 Chenopodium quinoa HOM05D004703 ORTHO05D005801 5.2e-104 381.7 264 72.7
Nitab4.5_0005167g0040 Nicotiana tabacum HOM05D004703 ORTHO05D005801 5.2e-104 381.7 272 71.0
unitig_22.g5479 Utricularia gibba HOM05D004703 ORTHO05D005801 3.4e-103 379.0 270 68.1
Manes.01G070700 Manihot esculenta HOM05D004703 ORTHO05D005801 4.4e-103 378.6 298 68.5
Nitab4.5_0012494g0020 Nicotiana tabacum HOM05D004703 ORTHO05D005801 5.7e-103 378.3 272 70.6
Sopen08g028180 Solanum pennellii HOM05D004703 ORTHO05D005801 7.5e-103 377.9 271 71.2
Lsat_1_v5_gn_6_10661 Lactuca sativa HOM05D004703 ORTHO05D005801 1.7e-102 376.7 268 69.0
Solyc08g079820.3 Solanum lycopersicum HOM05D004703 ORTHO05D005801 1.7e-102 376.7 271 70.8
AUR62010550 Chenopodium quinoa HOM05D004703 ORTHO05D005801 2.2e-102 376.3 266 71.4
SGA_v2.0_scaffold37G14871 Striga asiatica HOM05D004703 ORTHO05D005801 2.2e-102 376.3 291 64.9
CSS0042147 Camellia sinensis var. sinensis HOM05D004703 ORTHO05D005801 3.7e-102 375.6 268 71.6
EL10Ac5g12672 Beta vulgaris HOM05D004703 ORTHO05D005801 6.3e-102 374.8 272 70.2
Rhsim08G0184400 Rhododendron simsii HOM05D004703 ORTHO05D005801 1.1e-101 374.0 315 63.5
Ah.12g053460 Amaranthus hybridus HOM05D004703 ORTHO05D005801 4.1e-101 372.1 272 70.2
Ah.12g057950 Amaranthus hybridus HOM05D004703 ORTHO05D005801 4.1e-101 372.1 272 70.2
Aqoxy7G00537 Aquilegia oxysepala HOM05D004703 ORTHO05D005801 4.1e-101 372.1 273 70.3
arahy.Tifrunner.gnm1.ann1.RRY62Q Arachis hypogaea HOM05D004703 ORTHO05D005801 4.1e-101 372.1 238 77.7
ECA233G5834 Erigeron canadensis HOM05D004703 ORTHO05D005801 4.1e-101 372.1 274 67.9
Sabra03G0082300 Salix brachista HOM05D004703 ORTHO05D005801 1.0e-99 367.5 321 63.6
VMungo0251G1928 Vigna mungo HOM05D004703 ORTHO05D005801 1.7e-99 366.7 318 60.7
HanXRQChr07g0186971 Helianthus annuus HOM05D004703 ORTHO05D005801 3.9e-99 365.5 319 60.2
Peaxi162Scf00620g00231 Petunia axillaris HOM05D004703 ORTHO05D005801 8.6e-99 364.4 294 65.0
Ah.02g116260 Amaranthus hybridus HOM05D004703 ORTHO05D005801 3.3e-98 362.5 268 66.8
RcHm_v2.0_Chr6g0265181 Rosa chinensis HOM05D004703 ORTHO05D005801 4.3e-98 362.1 273 67.8
RcHm_v2.0_Chr6g0265101 Rosa chinensis HOM05D004703 ORTHO05D005801 5.6e-98 361.7 273 67.8
CDE04G3458 Ceratophyllum demersum HOM05D004703 ORTHO05D005801 2.3e-96 356.3 273 65.6
Psat4g069480 Pisum sativum HOM05D004703 ORTHO05D005801 5.2e-96 355.1 231 75.8
ClCG01G003390 Citrullus lanatus HOM05D004703 ORTHO05D005801 8.9e-96 354.4 328 61.0
PSO478G3008 Papaver somniferum HOM05D004703 ORTHO05D005801 8.9e-96 354.4 281 63.0
CAN.G630.24 Capsicum annuum HOM05D004703 ORTHO05D005801 1.2e-95 354.0 231 74.9
CSS0006775 Camellia sinensis var. sinensis HOM05D004703 ORTHO05D005801 1.5e-95 353.6 231 75.8
PSO782G3959 Papaver somniferum HOM05D004703 ORTHO05D005801 5.8e-95 351.7 284 63.0
Os06g0129700 Oryza sativa ssp. japonica HOM05D004703 ORTHO05D005801 2.2e-94 349.7 274 64.2
MBI04_g28556_MAGBIO Magnolia biondii HOM05D004703 ORTHO05D005801 2.9e-94 349.4 231 74.0
Lj2A203G54 Lonicera japonica HOM05D004703 ORTHO05D005801 2.4e-93 346.3 231 74.0
PSO478G3534 Papaver somniferum HOM05D004703 ORTHO05D005801 4.1e-93 345.5 250 68.0
Cpa.g.sc29.48 Carica papaya HOM05D004703 ORTHO05D005801 1.2e-92 344.0 302 62.6
HPP92_020651 Vanilla planifolia HOM05D004703 ORTHO05D005801 3.9e-91 339.0 290 61.4
Sp6g05530 Schrenkiella parvula HOM05D004703 ORTHO05D005801 1.9e-90 336.7 207 87.0
MELO3C005608.2 Cucumis melo HOM05D004703 ORTHO05D005801 9.5e-90 334.3 405 50.6
FAN08G2483 Fragaria x ananassa HOM05D004703 ORTHO05D005801 4.6e-84 315.5 264 66.3
arahy.Tifrunner.gnm1.ann1.TVWC12 Arachis hypogaea HOM05D004703 ORTHO05D005801 1.5e-82 310.5 231 69.3
SalBow6G2643 Salvia bowleyana HOM05D004703 ORTHO05D005801 4.3e-82 308.9 197 75.6
CBR_g30593 Chara braunii HOM05D004703 ORTHO05D005801 8.9e-80 301.2 255 57.3
Mapoly0093s0020 Marchantia polymorpha HOM05D004703 ORTHO05D005801 9.2e-77 291.2 254 56.3
vmacro19246 Vaccinium macrocarpon HOM05D004703 ORTHO05D005801 3.5e-76 289.3 206 74.3
Pp3c15_11750 Physcomitrium patens HOM05D004703 ORTHO05D005801 1.7e-75 287.0 254 56.3
BcaB04g18565 Brassica carinata HOM05D004703 ORTHO05D005801 1.5e-74 283.9 208 76.0
BcaB02g09202 Brassica carinata HOM05D004703 ORTHO05D005801 2.8e-73 279.6 174 84.5
Sc07g0009460 Simmondsia chinensis HOM05D004703 ORTHO05D005801 2.2e-70 270.0 227 63.0
SMO140G0070 Selaginella moellendorffii HOM05D004703 ORTHO05D005801 2.1e-68 263.5 198 62.6
BcaB02g11533 Brassica carinata HOM05D004703 ORTHO05D005801 4.6e-68 262.3 231 65.8
Nn1g00505 Nelumbo nucifera HOM05D004703 ORTHO05D005801 2.5e-66 256.5 213 65.3
RcHm_v2.0_Chr0c37g0502981 Rosa chinensis HOM05D004703 ORTHO05D005801 8.1e-65 251.5 223 61.4
Zm00001eb378400 Zea mays HOM05D004703 ORTHO05D005801 8.1e-65 251.5 176 74.4
arahy.Tifrunner.gnm1.ann1.HPWZ3I Arachis hypogaea HOM05D004703 ORTHO05D005801 4.4e-63 245.7 161 77.0
RcHm_v2.0_Chr4g0403961 Rosa chinensis HOM05D004703 ORTHO05D005801 1.9e-61 240.4 216 62.0
Haze_13993 Corylus avellana HOM05D004703 ORTHO05D005801 4.3e-58 229.2 185 69.2
AagrBONN_evm.TU.Sc2ySwM_344.4389 Anthoceros agrestis HOM05D004703 ORTHO05D005801 8.4e-54 214.9 192 57.3
MSTRG.25560 Avicennia marina HOM05D004703 ORTHO05D005801 1.1e-53 214.5 131 80.2
BcaC01g04204 Brassica carinata HOM05D004703 ORTHO05D005801 1.3e-49 201.1 142 77.5
arahy.Tifrunner.gnm1.ann1.U0A30G Arachis hypogaea HOM05D004703 ORTHO05D005801 6.5e-46 188.7 171 62.0
arahy.Tifrunner.gnm1.ann1.DGE7ZD Arachis hypogaea HOM05D004703 ORTHO05D005801 1.1e-45 188.0 179 60.9
arahy.Tifrunner.gnm1.ann1.0W2QGA Arachis hypogaea HOM05D004703 ORTHO05D005801 1.9e-45 187.2 157 66.9
arahy.Tifrunner.gnm1.ann1.R8Q162 Arachis hypogaea HOM05D004703 ORTHO05D005801 2.5e-45 186.8 157 66.2
arahy.Tifrunner.gnm1.ann1.KBZV3C Arachis hypogaea HOM05D004703 ORTHO05D005801 1.2e-44 184.5 165 63.6
arahy.Tifrunner.gnm1.ann1.QD9SPH Arachis hypogaea HOM05D004703 ORTHO05D005801 1.2e-44 184.5 157 66.2
arahy.Tifrunner.gnm1.ann1.7IH5G2 Arachis hypogaea HOM05D004703 ORTHO05D005801 1.8e-43 180.6 165 62.4
arahy.Tifrunner.gnm1.ann1.TN8QBF Arachis hypogaea HOM05D004703 ORTHO05D005801 3.0e-43 179.9 157 66.2
arahy.Tifrunner.gnm1.ann1.J3Q2MP Arachis hypogaea HOM05D004703 ORTHO05D005801 1.3e-41 174.5 165 60.6
ATR0905G001 Amborella trichopoda HOM05D004703 ORTHO05D005801 6.2e-41 172.2 122 65.6
arahy.Tifrunner.gnm1.ann1.QT2LTC Arachis hypogaea HOM05D004703 ORTHO05D005801 1.0e-38 164.9 151 62.3
arahy.Tifrunner.gnm1.ann1.EX0EXI Arachis hypogaea HOM05D004703 ORTHO05D005801 2.5e-37 160.2 165 58.8
Zm00001eb279110 Zea mays HOM05D004703 ORTHO05D005801 1.9e-34 150.6 99 78.8
RcHm_v2.0_Chr4g0425481 Rosa chinensis HOM05D004703 ORTHO05D005801 9.7e-34 148.3 178 53.9
Zm00001eb113910 Zea mays HOM05D004703 ORTHO05D005801 1.3e-33 147.9 101 76.2
arahy.Tifrunner.gnm1.ann1.WGQ9HG Arachis hypogaea HOM05D004703 ORTHO05D005801 2.2e-33 147.1 124 66.1
arahy.Tifrunner.gnm1.ann1.QV6CQV Arachis hypogaea HOM05D004703 ORTHO05D005801 3.7e-33 146.4 123 65.9
arahy.Tifrunner.gnm1.ann1.UX21TB Arachis hypogaea HOM05D004703 ORTHO05D005801 8.2e-33 145.2 159 57.2
arahy.Tifrunner.gnm1.ann1.YD44XK Arachis hypogaea HOM05D004703 ORTHO05D005801 8.2e-33 145.2 159 57.2
arahy.Tifrunner.gnm1.ann1.L680XF Arachis hypogaea HOM05D004703 ORTHO05D005801 4.1e-32 142.9 108 72.2
arahy.Tifrunner.gnm1.ann1.XKXY1P Arachis hypogaea HOM05D004703 ORTHO05D005801 1.5e-31 141.0 95 78.9
Cfa024731 Carpinus fangiana HOM05D004703 ORTHO05D005801 1.7e-30 137.5 334 31.4
ATR0251G001 Amborella trichopoda HOM05D004703 ORTHO05D005801 6.1e-28 129.0 88 68.2
arahy.Tifrunner.gnm1.ann1.DQS0N1 Arachis hypogaea HOM05D004703 ORTHO05D005801 2.0e-26 124.0 184 46.2
arahy.Tifrunner.gnm1.ann1.0PA3BU Arachis hypogaea HOM05D004703 ORTHO05D005801 2.8e-25 120.2 109 62.4
arahy.Tifrunner.gnm1.ann1.5L4UK7 Arachis hypogaea HOM05D004703 ORTHO05D005801 1.3e-22 111.3 138 48.6
arahy.Tifrunner.gnm1.ann1.IA6KQS Arachis hypogaea HOM05D004703 ORTHO05D005801 3.2e-21 106.7 70 77.1
vmacro19247 Vaccinium macrocarpon HOM05D004703 ORTHO05D005801 3.6e-20 103.2 74 64.9
arahy.Tifrunner.gnm1.ann1.N0B60F Arachis hypogaea HOM05D003718 ORTHO05D004402 3.3e-18 96.7 63 74.6
arahy.Tifrunner.gnm1.ann1.2KDH9Q Arachis hypogaea HOM05D004703 ORTHO05D005801 3.7e-17 93.2 97 57.7
arahy.Tifrunner.gnm1.ann1.4J0L4L Arachis hypogaea HOM05D004703 ORTHO05D005801 1.4e-16 91.3 95 56.8
CSS0004055 Camellia sinensis var. sinensis HOM05D004703 ORTHO05D005801 4.5e-15 86.3 58 74.1
SalBow6G4210 Salvia bowleyana HOM05D004703 ORTHO05D005801 6.7e-11 72.4 130 35.4
arahy.Tifrunner.gnm1.ann1.RAR2PQ Arachis hypogaea HOM05D004703 ORTHO05D030873 2.8e-09 67.0 111 37.8
arahy.Tifrunner.gnm1.ann1.CXRB51 Arachis hypogaea HOM05D004703 ORTHO05D015979 5.3e-08 62.8 40 75.0
arahy.Tifrunner.gnm1.ann1.54H2MY Arachis hypogaea HOM05D001155 ORTHO05D015979 1.6e-07 61.2 43 69.8
arahy.Tifrunner.gnm1.ann1.5AIV52 Arachis hypogaea HOM05D001155 ORTHO05D001080 2.7e-07 60.5 36 77.8


User provided reference genes

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