Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB01g01689 Brassica carinata HOM05D004489 ORTHO05D095684 8.0e-73 277.3 176 100.0
BcaB04g17396 Brassica carinata HOM05D004489 ORTHO05D095687 4.7e-57 224.9 177 85.3
BcaB03g16202 Brassica carinata HOM05D004489 ORTHO05D093905 5.2e-48 194.9 145 74.5
BcaB06g26545 Brassica carinata HOM05D004489 ORTHO05D095075 8.9e-48 194.1 174 64.4
BcaB02g10531 Brassica carinata HOM05D004489 ORTHO05D094500 8.3e-46 187.6 175 69.7
BcaB08g35381 Brassica carinata HOM05D004489 ORTHO05D091739 8.9e-40 167.5 156 73.1
BcaB06g27095 Brassica carinata HOM05D004489 ORTHO05D095035 1.2e-39 167.2 152 61.8
BcaB05g23045 Brassica carinata HOM05D008277 ORTHO05D093753 6.4e-38 161.4 144 81.2
C08p08580 Brassica napus HOM05D004489 ORTHO05D010056 2.4e-37 159.5 152 61.2
BcaC04g20631 Brassica carinata HOM05D004489 ORTHO05D010056 3.2e-37 159.1 153 60.8
C09p41300 Brassica napus HOM05D004489 ORTHO05D010056 3.2e-37 159.1 153 60.8
BcaB05g24918 Brassica carinata HOM05D004489 ORTHO05D092070 9.2e-37 157.5 175 61.7
BcaC07g37389 Brassica carinata HOM05D004489 ORTHO05D010056 2.7e-36 156.0 152 60.5
BolC8t47699H Brassica oleracea HOM05D004489 ORTHO05D010056 2.7e-36 156.0 152 60.5
C07p03810 Brassica napus HOM05D004489 ORTHO05D010056 4.6e-36 155.2 153 58.8
BcaC02g11524 Brassica carinata HOM05D004489 ORTHO05D010056 1.0e-35 154.1 151 59.6
C02p47420 Brassica napus HOM05D004489 ORTHO05D010056 1.3e-35 153.7 153 58.2
BolC7t40773H Brassica oleracea HOM05D004489 ORTHO05D010056 5.1e-35 151.8 153 58.2
BcaC04g22095 Brassica carinata HOM05D004489 ORTHO05D000493 1.1e-34 150.6 153 57.5
BolC9t55268H Brassica oleracea HOM05D004489 ORTHO05D010056 1.1e-34 150.6 153 57.5
C07p01860 Brassica napus HOM05D004489 ORTHO05D010056 1.5e-34 150.2 153 56.2
BolC2t08562H Brassica oleracea HOM05D004489 ORTHO05D010056 9.5e-34 147.5 153 56.9
BcaC01g01829 Brassica carinata HOM05D004489 ORTHO05D010056 1.6e-33 146.7 153 56.2
BcaC05g29022 Brassica carinata HOM05D004489 ORTHO05D010056 1.8e-32 143.3 153 55.6
C05p52380 Brassica napus HOM05D004489 ORTHO05D010056 1.8e-32 143.3 153 55.6
BcaC09g51560 Brassica carinata HOM05D004489 ORTHO05D010056 1.2e-31 140.6 150 54.0
BcaC08g45661 Brassica carinata HOM05D004489 ORTHO05D010056 1.5e-31 140.2 153 52.9
BcaC03g14954 Brassica carinata HOM05D004489 ORTHO05D010056 4.4e-31 138.7 153 54.2
BcaB01g01502 Brassica carinata HOM05D004489 ORTHO05D094885 1.3e-30 137.1 141 57.4
BcaC07g38382 Brassica carinata HOM05D004489 ORTHO05D010056 1.7e-30 136.7 152 52.6
BcaC03g16680 Brassica carinata HOM05D004489 ORTHO05D010056 2.9e-30 136.0 153 54.9
BcaC02g07770 Brassica carinata HOM05D004489 ORTHO05D010056 1.4e-29 133.7 142 55.6
C09p20870 Brassica napus HOM05D004489 ORTHO05D010056 1.9e-29 133.3 150 53.3
BolC9t54984H Brassica oleracea HOM05D004489 ORTHO05D010056 1.9e-29 133.3 150 53.3
C09p34080 Brassica napus HOM05D004489 ORTHO05D010056 3.2e-29 132.5 152 52.6
BolC3t18663H Brassica oleracea HOM05D004489 ORTHO05D010056 3.2e-29 132.5 175 47.4
BolC9t56245H Brassica oleracea HOM05D004489 ORTHO05D010056 3.2e-29 132.5 152 52.6
BcaC04g20751 Brassica carinata HOM05D004489 ORTHO05D010056 7.1e-29 131.3 153 52.3
BcaC03g15256 Brassica carinata HOM05D004489 ORTHO05D010056 1.2e-28 130.6 135 57.8
BcaNung03342 Brassica carinata HOM05D004489 ORTHO05D010056 1.2e-28 130.6 153 53.6
C07p23290 Brassica napus HOM05D004489 ORTHO05D010056 1.2e-28 130.6 153 53.6
C01p35220 Brassica napus HOM05D004489 ORTHO05D010056 2.1e-28 129.8 152 52.0
BcaC04g22309 Brassica carinata HOM05D004489 ORTHO05D010056 2.7e-28 129.4 151 53.6
C03p64090 Brassica napus HOM05D004489 ORTHO05D010056 3.5e-28 129.0 175 46.9
BcaB08g35275 Brassica carinata HOM05D004489 ORTHO05D093088 6.0e-28 128.3 121 62.8
BolC7t42863H Brassica oleracea HOM05D004489 ORTHO05D010056 1.3e-27 127.1 150 53.3
C05p26780 Brassica napus HOM05D004489 ORTHO05D010056 5.1e-27 125.2 146 51.4
A06p23470 Brassica napus HOM05D004489 ORTHO05D010056 8.7e-27 124.4 152 50.7
C01p35260 Brassica napus HOM05D004489 ORTHO05D010056 8.7e-27 124.4 152 50.0
BolC1t03483H Brassica oleracea HOM05D004489 ORTHO05D010056 8.7e-27 124.4 152 50.0
BcaC06g36646 Brassica carinata HOM05D004489 ORTHO05D010056 1.9e-26 123.2 130 56.2
BcaC09g51020 Brassica carinata HOM05D004489 ORTHO05D010056 4.3e-26 122.1 130 57.7
C05p22010 Brassica napus HOM05D004489 ORTHO05D010056 1.6e-25 120.2 129 51.2
C09p39590 Brassica napus HOM05D004489 ORTHO05D010056 2.8e-25 119.4 132 51.5
C06p25970 Brassica napus HOM05D004489 ORTHO05D021897 3.6e-25 119.0 130 51.5
C06p10210 Brassica napus HOM05D004489 ORTHO05D010056 6.2e-25 118.2 152 48.0
BolC5t30898H Brassica oleracea HOM05D004489 ORTHO05D010056 1.1e-24 117.5 130 50.8
BolC8t47151H Brassica oleracea HOM05D004489 ORTHO05D010056 1.1e-24 117.5 128 51.6
C02p21030 Brassica napus HOM05D004489 ORTHO05D010056 3.1e-24 115.9 150 48.7
BcaC05g28262 Brassica carinata HOM05D004489 ORTHO05D010056 4.0e-24 115.5 130 53.8
BcaB04g17006 Brassica carinata HOM05D004489 ORTHO05D092589 5.2e-24 115.2 123 78.0
BcaC04g18700 Brassica carinata HOM05D004489 ORTHO05D010056 7.6e-23 111.3 145 49.0
C08p18050 Brassica napus HOM05D004489 ORTHO05D021897 7.6e-23 111.3 140 47.1
BolC8t49437H Brassica oleracea HOM05D004489 ORTHO05D021897 7.6e-23 111.3 140 47.1
BcaC09g48389 Brassica carinata HOM05D004489 ORTHO05D010056 1.7e-22 110.2 137 49.6
BcaC01g00378 Brassica carinata HOM05D004489 ORTHO05D010056 2.9e-22 109.4 125 54.4
C02p24700 Brassica napus HOM05D004489 ORTHO05D098125 6.4e-22 108.2 134 51.5
BcaB01g01214 Brassica carinata HOM05D004489 ORTHO05D000740 1.9e-21 106.7 144 46.5
BcaC07g38503 Brassica carinata HOM05D004489 ORTHO05D010056 2.4e-21 106.3 148 47.3
BcaC07g37478 Brassica carinata HOM05D004489 ORTHO05D010056 1.2e-20 104.0 120 55.0
BcaC04g22067 Brassica carinata HOM05D004489 ORTHO05D027587 2.1e-20 103.2 84 69.0
BcaB07g33270 Brassica carinata HOM05D000888 ORTHO05D000740 6.0e-20 101.7 145 45.5
BcaB07g33397 Brassica carinata HOM05D004489 ORTHO05D000740 6.0e-20 101.7 144 45.8
BcaB03g16167 Brassica carinata HOM05D004489 ORTHO05D091635 2.3e-19 99.8 144 44.4
BcaC06g36060 Brassica carinata HOM05D004489 ORTHO05D092528 3.0e-19 99.4 152 44.1
A05p21780 Brassica napus HOM05D004489 ORTHO05D027587 3.0e-19 99.4 75 72.0
BraA05t21099Z Brassica rapa HOM05D004489 ORTHO05D027587 3.0e-19 99.4 75 72.0
BcaB03g16455 Brassica carinata HOM05D004489 ORTHO05D005643 6.6e-19 98.2 144 44.4
BraA06t25443Z Brassica rapa HOM05D004489 ORTHO05D010056 6.6e-19 98.2 121 48.8
C07p20720 Brassica napus HOM05D004489 ORTHO05D010056 8.7e-19 97.8 129 48.8
BolC9t55309H Brassica oleracea HOM05D004489 ORTHO05D027587 4.3e-18 95.5 75 69.3
C09p37510 Brassica napus HOM05D004489 ORTHO05D032456 5.6e-18 95.1 126 50.8
BolC9t56581H Brassica oleracea HOM05D004489 ORTHO05D032456 5.6e-18 95.1 126 50.8
BcaC04g21271 Brassica carinata HOM05D004489 ORTHO05D039740 7.3e-18 94.7 150 42.7
BcaC05g26196 Brassica carinata HOM05D004489 ORTHO05D010056 9.6e-18 94.4 87 56.3
BcaB04g17769 Brassica carinata HOM05D004489 ORTHO05D096269 3.6e-17 92.4 56 87.5
BcaC02g10072 Brassica carinata HOM05D004489 ORTHO05D090663 4.8e-17 92.0 134 48.5
BolC2t08244H Brassica oleracea HOM05D004489 ORTHO05D010056 4.8e-17 92.0 82 58.5
C01p50400 Brassica napus HOM05D004489 ORTHO05D010056 6.2e-17 91.7 83 57.8
C08p11390 Brassica napus HOM05D004489 ORTHO05D010056 8.1e-17 91.3 83 57.8
BcaC04g19493 Brassica carinata HOM05D004489 ORTHO05D010056 2.4e-16 89.7 145 43.4
BcaB03g16158 Brassica carinata HOM05D004489 ORTHO05D091594 7.6e-15 84.7 66 86.4
BolC7t42604H Brassica oleracea HOM05D004489 ORTHO05D010056 7.6e-15 84.7 152 39.5
BcaC03g17739 Brassica carinata HOM05D004489 ORTHO05D010056 9.9e-15 84.3 70 60.0
C07p01700 Brassica napus HOM05D004489 ORTHO05D010056 9.9e-15 84.3 121 47.1
BcaC05g26627 Brassica carinata HOM05D004489 ORTHO05D010056 1.3e-14 84.0 77 58.4
C02p57490 Brassica napus HOM05D004489 ORTHO05D010056 1.3e-14 84.0 152 38.8
BraA04t16648Z Brassica rapa HOM05D004489 ORTHO05D018788 1.3e-14 84.0 152 40.1
BcaC04g20961 Brassica carinata HOM05D004489 ORTHO05D032456 1.7e-14 83.6 116 49.1
BolC6t37769H Brassica oleracea HOM05D004489 ORTHO05D010056 2.2e-14 83.2 83 55.4
C01p27340 Brassica napus HOM05D004489 ORTHO05D010056 1.1e-13 80.9 83 53.0
BcaC08g44969 Brassica carinata HOM05D004489 ORTHO05D010056 1.9e-13 80.1 77 55.8
C01p30160 Brassica napus HOM05D004489 ORTHO05D010056 2.4e-13 79.7 152 38.2
A05p19170 Brassica napus HOM05D004489 ORTHO05D027759 4.2e-13 79.0 78 56.4
BraA05t20820Z Brassica rapa HOM05D004489 ORTHO05D027759 5.4e-13 78.6 78 56.4
C09p55140 Brassica napus HOM05D004489 ORTHO05D010056 9.3e-13 77.8 70 57.1
BcaB04g17639 Brassica carinata HOM05D008277 ORTHO05D011446 3.5e-12 75.9 64 82.8
BolC1t01193H Brassica oleracea HOM05D004489 ORTHO05D010056 3.5e-12 75.9 94 50.0
BcaC03g16777 Brassica carinata HOM05D004489 ORTHO05D027759 6.0e-12 75.1 78 51.3
BolC2t10703H Brassica oleracea HOM05D004489 ORTHO05D027759 6.0e-12 75.1 78 51.3
BcaB08g35276 Brassica carinata HOM05D008277 ORTHO05D091063 5.1e-11 72.0 44 75.0
A05p21690 Brassica napus HOM05D004489 ORTHO05D100974 5.1e-11 72.0 143 40.6
BcaB02g11425 Brassica carinata HOM05D000888 ORTHO05D000740 6.7e-11 71.6 137 36.5
A04p09860 Brassica napus HOM05D004489 ORTHO05D010056 6.7e-11 71.6 53 64.2
C06p26040 Brassica napus HOM05D004489 ORTHO05D010056 1.5e-10 70.5 130 37.7
A07p11790 Brassica napus HOM05D004489 ORTHO05D010056 1.9e-10 70.1 149 35.6
BraA07t28964Z Brassica rapa HOM05D004489 ORTHO05D010056 1.9e-10 70.1 149 35.6
BraA09t38666Z Brassica rapa HOM05D004489 ORTHO05D010056 2.5e-10 69.7 49 69.4
BcaB02g06508 Brassica carinata HOM05D004489 ORTHO05D094292 4.3e-10 68.9 135 37.0
BolC4t27228H Brassica oleracea HOM05D004489 ORTHO05D018788 1.2e-07 60.8 84 44.0
BolC9t58376H Brassica oleracea HOM05D004489 ORTHO05D018788 1.2e-07 60.8 84 45.2
BcaB04g18048 Brassica carinata HOM05D004489 ORTHO05D091089 2.0e-07 60.1 51 62.7
BolC5t31966H Brassica oleracea HOM05D004489 ORTHO05D018788 2.0e-07 60.1 82 45.1
BcaB08g35162 Brassica carinata HOM05D000888 ORTHO05D000740 2.6e-07 59.7 143 33.6
BcaC08g44976 Brassica carinata HOM05D004489 ORTHO05D010056 3.4e-07 59.3 86 45.3
BraA02t07746Z Brassica rapa HOM05D004489 ORTHO05D018788 5.8e-07 58.5 118 35.6


User provided reference genes

Program Settings