Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB01g01630 Brassica carinata HOM05D002776 ORTHO05D011320 5.0e-168 594.3 297 100.0
BcaB05g23247 Brassica carinata HOM05D002776 ORTHO05D011320 6.0e-121 438.0 326 72.7
BcaB05g23078 Brassica carinata HOM05D002776 ORTHO05D011320 7.6e-92 341.3 230 76.1
BcaC02g09778 Brassica carinata HOM05D002776 ORTHO05D011320 1.1e-90 337.4 274 66.8
BcaB03g16806 Brassica carinata HOM05D002776 ORTHO05D003044 1.6e-89 333.6 248 70.2
C02p53520 Brassica napus HOM05D002776 ORTHO05D003044 4.3e-87 325.5 291 62.2
A01p26310 Brassica napus HOM05D002776 ORTHO05D011320 5.6e-87 325.1 316 58.5
C01p30580 Brassica napus HOM05D002776 ORTHO05D003044 2.8e-86 322.8 291 61.9
BcaB05g22944 Brassica carinata HOM05D002776 ORTHO05D000395 8.1e-86 321.2 248 69.0
A03p65940 Brassica napus HOM05D002776 ORTHO05D003044 3.1e-85 319.3 291 60.5
C05p34920 Brassica napus HOM05D002776 ORTHO05D011320 4.0e-85 318.9 295 60.7
C07p38490 Brassica napus HOM05D002776 ORTHO05D011320 4.0e-85 318.9 297 60.6
A05p28380 Brassica napus HOM05D002776 ORTHO05D003044 9.0e-85 317.8 291 61.2
C07p49090 Brassica napus HOM05D002776 ORTHO05D003044 9.0e-85 317.8 291 61.5
C01p48980 Brassica napus HOM05D002776 ORTHO05D003542 1.2e-84 317.4 296 60.1
BcaB03g16296 Brassica carinata HOM05D002776 ORTHO05D000395 9.6e-79 297.7 195 78.5
C03p65980 Brassica napus HOM05D002776 ORTHO05D003044 9.6e-79 297.7 291 58.4
BcaB01g01307 Brassica carinata HOM05D002776 ORTHO05D003044 3.2e-74 282.7 280 57.1
C03p66380 Brassica napus HOM05D002776 ORTHO05D003044 3.5e-73 279.3 281 56.6
BolC6t36736H Brassica oleracea HOM05D002776 ORTHO05D011320 1.3e-70 270.8 291 55.3
C04p36700 Brassica napus HOM05D002776 ORTHO05D011320 8.2e-70 268.1 277 57.8
BraA03t15291Z Brassica rapa HOM05D002776 ORTHO05D000395 4.1e-69 265.8 195 70.8
BcaC04g22429 Brassica carinata HOM05D002776 ORTHO05D011320 3.4e-68 262.7 280 55.4
BcaC09g48965 Brassica carinata HOM05D002776 ORTHO05D003044 1.7e-67 260.4 280 56.1
BcaC06g36687 Brassica carinata HOM05D002776 ORTHO05D011320 2.9e-67 259.6 180 75.0
BcaC08g44371 Brassica carinata HOM05D002776 ORTHO05D003044 3.8e-67 259.2 280 55.0
BolC3t18858H Brassica oleracea HOM05D002776 ORTHO05D000395 8.5e-67 258.1 240 60.4
C06p18050 Brassica napus HOM05D002776 ORTHO05D000395 4.2e-66 255.8 195 70.3
A10p06580 Brassica napus HOM05D002776 ORTHO05D000395 5.5e-66 255.4 294 53.1
BraA09t40150Z Brassica rapa HOM05D002776 ORTHO05D011320 7.9e-65 251.5 195 68.7
BcaC05g26787 Brassica carinata HOM05D002776 ORTHO05D011320 1.0e-64 251.1 191 70.7
C03p44570 Brassica napus HOM05D002776 ORTHO05D011320 1.8e-64 250.4 195 68.7
C04p56090 Brassica napus HOM05D002776 ORTHO05D003044 2.0e-63 246.9 264 57.2
BcaC08g44059 Brassica carinata HOM05D002776 ORTHO05D011320 3.3e-63 246.1 195 69.7
C04p41830 Brassica napus HOM05D002776 ORTHO05D000395 4.3e-63 245.7 192 68.8
BcaB01g01817 Brassica carinata HOM05D002776 ORTHO05D003044 1.7e-62 243.8 127 90.6
BcaB02g11313 Brassica carinata HOM05D002776 ORTHO05D000395 2.8e-62 243.0 185 70.8
BcaB08g35015 Brassica carinata HOM05D002776 ORTHO05D011320 2.0e-60 236.9 278 54.0
BcaB01g03188 Brassica carinata HOM05D002776 ORTHO05D003044 1.3e-59 234.2 114 94.7
BolC8t49070H Brassica oleracea HOM05D002776 ORTHO05D011320 1.0e-51 208.0 314 46.2
C09p19460 Brassica napus HOM05D002776 ORTHO05D003044 2.2e-51 206.8 306 46.4
BraA07t28346Z Brassica rapa HOM05D002776 ORTHO05D000395 3.8e-51 206.1 308 47.4
C09p16540 Brassica napus HOM05D002776 ORTHO05D011320 1.1e-50 204.5 305 47.2
BcaB06g27856 Brassica carinata HOM05D002776 ORTHO05D003044 1.4e-50 204.1 295 46.4
BcaB03g15955 Brassica carinata HOM05D002776 ORTHO05D011320 2.5e-50 203.4 171 64.9
A03p54420 Brassica napus HOM05D002776 ORTHO05D003044 2.5e-50 203.4 214 55.1
C03p80440 Brassica napus HOM05D002776 ORTHO05D011320 4.2e-50 202.6 286 45.1
BolC3t18911H Brassica oleracea HOM05D002776 ORTHO05D003044 2.1e-49 200.3 178 60.1
BcaC06g36448 Brassica carinata HOM05D002776 ORTHO05D003044 3.6e-49 199.5 272 47.8
C01p44940 Brassica napus HOM05D002776 ORTHO05D003044 4.7e-49 199.1 175 60.6
BraA03t15647Z Brassica rapa HOM05D002776 ORTHO05D003044 4.7e-49 199.1 170 61.2
A10p06820 Brassica napus HOM05D002776 ORTHO05D003044 1.4e-48 197.6 307 46.3
C09p27490 Brassica napus HOM05D002776 ORTHO05D003044 3.9e-48 196.1 175 60.0
BolC5t32217H Brassica oleracea HOM05D002776 ORTHO05D011320 6.7e-48 195.3 318 44.7
A08p06070 Brassica napus HOM05D002776 ORTHO05D011320 3.7e-46 189.5 132 73.5
BcaC03g14316 Brassica carinata HOM05D002776 ORTHO05D011320 2.6e-44 183.3 168 59.5
BcaC05g25874 Brassica carinata HOM05D002776 ORTHO05D003044 2.6e-44 183.3 113 80.5
C03p75860 Brassica napus HOM05D002776 ORTHO05D003044 3.5e-44 183.0 157 62.4
A08p09940 Brassica napus HOM05D002776 ORTHO05D003044 7.7e-44 181.8 157 61.8
BcaC08g43735 Brassica carinata HOM05D002776 ORTHO05D003044 2.5e-42 176.8 127 69.3
C03p56210 Brassica napus HOM05D002776 ORTHO05D003044 3.2e-42 176.4 238 48.3
BcaB07g33753 Brassica carinata HOM05D002776 ORTHO05D011320 9.4e-42 174.9 190 57.9
BcaB06g26729 Brassica carinata HOM05D002776 ORTHO05D000395 1.6e-41 174.1 236 49.6
BcaC09g50108 Brassica carinata HOM05D002776 ORTHO05D011320 6.8e-40 168.7 141 66.0
BcaB06g26484 Brassica carinata HOM05D002776 ORTHO05D000395 9.7e-39 164.9 127 70.1
BcaB07g33087 Brassica carinata HOM05D002776 ORTHO05D011320 1.8e-37 160.6 100 85.0
BcaC05g27518 Brassica carinata HOM05D002776 ORTHO05D000395 7.0e-37 158.7 287 43.6
A09p29650 Brassica napus HOM05D002776 ORTHO05D000395 5.9e-36 155.6 91 86.8
BraA09t38530Z Brassica rapa HOM05D002776 ORTHO05D000395 5.9e-36 155.6 91 86.8
BcaB04g17677 Brassica carinata HOM05D002776 ORTHO05D003044 7.7e-36 155.2 71 95.8
C02p52040 Brassica napus HOM05D002776 ORTHO05D000395 7.7e-36 155.2 139 62.6
BcaB06g27028 Brassica carinata HOM05D002776 ORTHO05D003044 1.3e-35 154.5 71 95.8
A01p20490 Brassica napus HOM05D002776 ORTHO05D000395 1.9e-34 150.6 140 61.4
A08p07570 Brassica napus HOM05D002776 ORTHO05D011320 1.2e-33 147.9 93 80.6
BraA08t32835Z Brassica rapa HOM05D002776 ORTHO05D011320 1.8e-32 144.1 91 80.2
BcaB02g11226 Brassica carinata HOM05D002776 ORTHO05D003044 2.6e-31 140.2 128 60.2
A07p02050 Brassica napus HOM05D002776 ORTHO05D003044 5.7e-31 139.0 187 46.5
BcaC01g02374 Brassica carinata HOM05D002776 ORTHO05D003044 5.4e-29 132.5 150 48.7
BcaC02g10286 Brassica carinata HOM05D002776 ORTHO05D011320 3.8e-27 126.3 153 52.9
A08p08130 Brassica napus HOM05D002776 ORTHO05D003044 5.0e-27 125.9 116 56.0
BcaB06g27029 Brassica carinata HOM05D002776 ORTHO05D011320 6.6e-27 125.6 85 77.6
BcaC07g39108 Brassica carinata HOM05D002776 ORTHO05D000395 3.3e-26 123.2 92 70.7
A01p20500 Brassica napus HOM05D002776 ORTHO05D003044 2.1e-25 120.6 116 55.2
BcaC06g33588 Brassica carinata HOM05D002776 ORTHO05D011320 6.1e-25 119.0 73 83.6
C05p44740 Brassica napus HOM05D002776 ORTHO05D003044 6.1e-25 119.0 121 52.9
BraA01t03051Z Brassica rapa HOM05D002776 ORTHO05D003044 6.1e-25 119.0 103 59.2
BcaB06g26760 Brassica carinata HOM05D002776 ORTHO05D008559 8.0e-25 118.6 63 84.1
BcaB02g06428 Brassica carinata HOM05D002776 ORTHO05D011320 1.8e-24 117.5 67 86.6
BcaC02g09112 Brassica carinata HOM05D002776 ORTHO05D011320 6.8e-24 115.5 147 49.0
C05p44730 Brassica napus HOM05D002776 ORTHO05D000395 6.8e-24 115.5 117 57.3
BolC3t17909H Brassica oleracea HOM05D002776 ORTHO05D003044 1.5e-23 114.4 61 88.5
A01p28530 Brassica napus HOM05D002776 ORTHO05D003044 2.0e-23 114.0 116 52.6
BcaB07g33314 Brassica carinata HOM05D002776 ORTHO05D003044 2.6e-23 113.6 59 84.7
BcaC06g33589 Brassica carinata HOM05D002776 ORTHO05D003542 4.4e-23 112.8 73 76.7
A08p07560 Brassica napus HOM05D002776 ORTHO05D003044 2.8e-22 110.2 121 50.4
BcaB01g02123 Brassica carinata HOM05D002776 ORTHO05D094509 2.4e-21 107.1 52 94.2
BcaB04g18312 Brassica carinata HOM05D002776 ORTHO05D003044 3.2e-21 106.7 52 90.4
BcaB03g16195 Brassica carinata HOM05D002776 ORTHO05D003044 1.6e-20 104.4 53 86.8
BcaB04g18118 Brassica carinata HOM05D002776 ORTHO05D000395 1.3e-19 101.3 54 90.7
BcaC02g08297 Brassica carinata HOM05D002776 ORTHO05D003044 4.3e-18 96.3 117 47.0
A09p33400 Brassica napus HOM05D002776 ORTHO05D003044 1.2e-17 94.7 53 83.0
BcaB03g16196 Brassica carinata HOM05D002776 ORTHO05D092087 1.0e-16 91.7 47 89.4
BraA09t38884Z Brassica rapa HOM05D002776 ORTHO05D000395 1.4e-16 91.3 98 53.1
BcaC01g03923 Brassica carinata HOM05D002776 ORTHO05D003542 5.2e-16 89.4 52 84.6
BcaB07g33086 Brassica carinata HOM05D002776 ORTHO05D003044 3.4e-15 86.7 39 92.3
BcaC05g25875 Brassica carinata HOM05D002776 ORTHO05D011320 2.2e-14 84.0 48 83.3
BcaB04g17428 Brassica carinata HOM05D002776 ORTHO05D091936 4.9e-14 82.8 171 38.6
BcaB05g23549 Brassica carinata HOM05D002776 ORTHO05D091522 8.3e-14 82.0 152 39.5
BcaC08g47023 Brassica carinata HOM05D002776 ORTHO05D095602 1.9e-13 80.9 109 44.0
C01p34330 Brassica napus HOM05D001224 ORTHO05D023838 5.4e-13 79.3 85 49.4
BolC1t03403H Brassica oleracea HOM05D001224 ORTHO05D023838 5.4e-13 79.3 85 49.4
BraA01t03052Z Brassica rapa HOM05D002776 ORTHO05D000395 6.6e-11 72.4 172 39.5
BcaB07g32988 Brassica carinata HOM05D002776 ORTHO05D003044 1.2e-09 68.2 57 59.6
BcaB04g17778 Brassica carinata HOM05D002776 ORTHO05D003044 1.5e-07 61.2 50 62.0
BcaB01g04536 Brassica carinata HOM05D002776 ORTHO05D011320 4.9e-06 56.2 85 47.1


User provided reference genes

Program Settings