Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB01g01572 Brassica carinata HOM05D005115 ORTHO05D005703 1.4e-34 149.1 76 100.0
Thhalv10028955m.g Eutrema salsugineum HOM05D005115 ORTHO05D005703 2.2e-19 98.6 66 74.2
BcaB01g02726 Brassica carinata HOM05D005115 ORTHO05D005703 8.3e-19 96.7 64 76.6
Aa31LG9G11140 Aethionema arabicum HOM05D005115 ORTHO05D005703 2.4e-18 95.1 64 78.1
Sp6g06500 Schrenkiella parvula HOM05D005115 ORTHO05D005703 2.4e-18 95.1 64 76.6
C03p35310 Brassica napus HOM05D005115 ORTHO05D005703 5.4e-18 94.0 64 75.0
BcaC01g04648 Brassica carinata HOM05D005115 ORTHO05D005703 7.1e-18 93.6 64 75.0
BolC3t15841H Brassica oleracea HOM05D005115 ORTHO05D005703 7.1e-18 93.6 64 75.0
AL6G45070 Arabidopsis lyrata HOM05D005115 ORTHO05D005703 9.2e-18 93.2 66 75.8
AT4G10970 Arabidopsis thaliana HOM05D005115 ORTHO05D005703 9.2e-18 93.2 64 76.6
Carub.0006s2972 Capsella rubella HOM05D005115 ORTHO05D005703 1.0e-16 89.7 64 75.0
CARHR255630 Cardamine hirsuta HOM05D005115 ORTHO05D005703 1.0e-16 89.7 67 70.1
A03p29200 Brassica napus HOM05D005115 ORTHO05D005703 6.6e-16 87.0 64 73.4
THA.LOC104815118 Tarenaya hassleriana HOM05D005115 ORTHO05D005703 2.2e-11 72.0 63 57.1
AT4G23910 Arabidopsis thaliana HOM05D005115 ORTHO05D005703 3.5e-09 64.7 71 50.7
Carub.0007s1718 Capsella rubella HOM05D005115 ORTHO05D005703 1.0e-08 63.2 65 53.8
Sc22g0004980 Simmondsia chinensis HOM05D005115 ORTHO05D005703 2.3e-08 62.0 62 48.4
Aqoxy7G00093 Aquilegia oxysepala HOM05D005115 ORTHO05D005703 1.1e-07 59.7 62 48.4
Thhalv10026287m.g Eutrema salsugineum HOM05D005115 ORTHO05D005703 1.5e-07 59.3 73 45.2
Manes.02G009400 Manihot esculenta HOM05D005115 ORTHO05D005703 1.5e-07 59.3 62 53.2
AL7G29420 Arabidopsis lyrata HOM05D005115 ORTHO05D005703 2.5e-07 58.5 64 51.6
C01p19150 Brassica napus HOM05D005115 ORTHO05D005703 3.3e-07 58.2 57 56.1
vmacro11350 Vaccinium macrocarpon HOM05D005115 ORTHO05D005703 3.3e-07 58.2 56 53.6
MSTRG.25681 Avicennia marina HOM05D005115 ORTHO05D005703 4.3e-07 57.8 58 51.7
Sp7g21880 Schrenkiella parvula HOM05D005115 ORTHO05D005703 9.6e-07 56.6 70 45.7
BcaNung01098 Brassica carinata HOM05D005115 ORTHO05D005703 1.2e-06 56.2 72 47.2
BolC1t01841H Brassica oleracea HOM05D005115 ORTHO05D005703 1.2e-06 56.2 57 54.4
Cfa011998 Carpinus fangiana HOM05D005115 ORTHO05D005703 1.2e-06 56.2 64 45.3
arahy.Tifrunner.gnm1.ann1.V4I9JE Arachis hypogaea HOM05D005115 ORTHO05D005703 1.6e-06 55.8 53 54.7
BcaC09g50931 Brassica carinata HOM05D005115 ORTHO05D005703 1.6e-06 55.8 57 54.4
A01p15220 Brassica napus HOM05D005115 ORTHO05D005703 1.6e-06 55.8 70 50.0
Cpa.g.sc79.29 Carica papaya HOM05D005115 ORTHO05D005703 1.6e-06 55.8 45 64.4
Haze_09072 Corylus avellana HOM05D005115 ORTHO05D005703 1.6e-06 55.8 64 45.3
Dinv37526 Davidia involucrata HOM05D005115 ORTHO05D005703 1.6e-06 55.8 65 47.7
arahy.Tifrunner.gnm1.ann1.ULQ1VN Arachis hypogaea HOM05D005115 ORTHO05D005703 2.1e-06 55.5 51 56.9
Rhsim02G0244500 Rhododendron simsii HOM05D005115 ORTHO05D005703 2.1e-06 55.5 65 49.2
COL.COLO4_10710 Corchorus olitorius HOM05D005115 ORTHO05D005703 2.8e-06 55.1 62 46.8
Phvul.002G164100 Phaseolus vulgaris HOM05D005115 ORTHO05D005703 2.8e-06 55.1 62 48.4
CiPaw.11G120600 Carya illinoinensis HOM05D005115 ORTHO05D005703 3.6e-06 54.7 64 45.3
Cc08_g16140 Coffea canephora HOM05D005115 ORTHO05D005703 4.7e-06 54.3 56 50.0
arahy.Tifrunner.gnm1.ann1.M14U5A Arachis hypogaea HOM05D005115 ORTHO05D005703 6.2e-06 53.9 53 54.7
RcHm_v2.0_Chr7g0194701 Rosa chinensis HOM05D005115 ORTHO05D005703 6.2e-06 53.9 54 51.9
Sopen08g004230 Solanum pennellii HOM05D005115 ORTHO05D005703 6.2e-06 53.9 66 40.9
TWI15G1136 Tripterygium wilfordii HOM05D005115 ORTHO05D005703 6.2e-06 53.9 56 50.0
Atru.chr9.1972 Acer truncatum HOM05D005115 ORTHO05D005703 8.1e-06 53.5 62 46.8
Atru.chr9.1986 Acer truncatum HOM05D005115 ORTHO05D005703 8.1e-06 53.5 62 46.8
BraA01t01460Z Brassica rapa HOM05D005115 ORTHO05D005703 8.1e-06 53.5 57 54.4
FvH4_5g04680 Fragaria vesca HOM05D005115 ORTHO05D005703 8.1e-06 53.5 64 45.3
FAN18G1353 Fragaria x ananassa HOM05D005115 ORTHO05D005703 8.1e-06 53.5 64 45.3
Glyma.01G225300 Glycine max HOM05D005115 ORTHO05D005703 8.1e-06 53.5 62 46.8
Glyma.11G017800 Glycine max HOM05D005115 ORTHO05D005703 8.1e-06 53.5 62 46.8
Gohir.A09G190300 Gossypium hirsutum HOM05D005115 ORTHO05D005703 8.1e-06 53.5 62 43.5
Hma1.2p1_0440F.1_g153350 Hydrangea macrophylla HOM05D005115 ORTHO05D005703 8.1e-06 53.5 64 43.8
PSO384G2123 Papaver somniferum HOM05D005115 ORTHO05D005703 8.1e-06 53.5 63 44.4


User provided reference genes

Program Settings