Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB01g01562 Brassica carinata HOM05D004217 ORTHO05D091974 1.5e-40 169.1 89 100.0
BcaB01g01563 Brassica carinata HOM05D004217 ORTHO05D094843 7.2e-38 160.2 89 97.8
AL4G39350 Arabidopsis lyrata HOM05D004217 ORTHO05D005561 1.5e-11 72.8 45 80.0
CARHR136470 Cardamine hirsuta HOM05D004217 ORTHO05D005561 1.5e-11 72.8 45 80.0
Carub.0004s2365 Capsella rubella HOM05D004217 ORTHO05D005561 2.6e-11 72.0 45 80.0
AT2G41350 Arabidopsis thaliana HOM05D004217 ORTHO05D005561 4.4e-11 71.2 45 77.8
A03p23240 Brassica napus HOM05D004217 ORTHO05D005561 1.7e-10 69.3 45 77.8
BraA03t11543Z Brassica rapa HOM05D004217 ORTHO05D005561 1.7e-10 69.3 45 77.8
C03p27740 Brassica napus HOM05D004217 ORTHO05D005561 2.2e-10 68.9 45 75.6
BcaC01g05340 Brassica carinata HOM05D004217 ORTHO05D005561 8.3e-10 67.0 45 75.6
BolC3t15143H Brassica oleracea HOM05D004217 ORTHO05D005561 8.3e-10 67.0 45 75.6
THA.LOC104824417 Tarenaya hassleriana HOM05D004217 ORTHO05D005561 1.1e-09 66.6 45 73.3
Sp4g23650 Schrenkiella parvula HOM05D004217 ORTHO05D005561 1.4e-09 66.2 80 52.5
Thhalv10017004m.g Eutrema salsugineum HOM05D004217 ORTHO05D005561 3.1e-09 65.1 45 68.9
Aa31LG5G11710 Aethionema arabicum HOM05D004217 ORTHO05D005561 4.1e-09 64.7 80 52.5
BcaB01g03471 Brassica carinata HOM05D004217 ORTHO05D005561 1.6e-08 62.8 43 74.4
Sc13g0001310 Simmondsia chinensis HOM05D004217 ORTHO05D005561 8.6e-07 57.0 35 74.3
Sc13g0001330 Simmondsia chinensis HOM05D004217 ORTHO05D005561 8.6e-07 57.0 35 74.3
vmacro07818 Vaccinium macrocarpon HOM05D004217 ORTHO05D005561 1.1e-06 56.6 36 72.2
THA.LOC104803276 Tarenaya hassleriana HOM05D004217 ORTHO05D005561 1.5e-06 56.2 45 62.2
COL.COLO4_35807 Corchorus olitorius HOM05D004217 ORTHO05D005561 1.9e-06 55.8 30 86.7
Cpa.g.sc5.203 Carica papaya HOM05D004217 ORTHO05D005561 2.5e-06 55.5 47 55.3
Eucgr.A00321 Eucalyptus grandis HOM05D004217 ORTHO05D005561 2.5e-06 55.5 30 83.3
Eucgr.A00412 Eucalyptus grandis HOM05D004217 ORTHO05D005561 2.5e-06 55.5 30 83.3
Duzib264G1114 Durio zibethinus HOM05D004217 ORTHO05D005561 3.3e-06 55.1 30 80.0
Atru.chr1.1483 Acer truncatum HOM05D004217 ORTHO05D005561 4.3e-06 54.7 41 68.3
PGR142G4280 Punica granatum HOM05D004217 ORTHO05D005561 4.3e-06 54.7 31 80.6
Manes.09G007800 Manihot esculenta HOM05D004217 ORTHO05D005561 5.6e-06 54.3 42 57.1
Potri.006G046200 Populus trichocarpa HOM05D004217 ORTHO05D005561 5.6e-06 54.3 48 56.2


User provided reference genes

Program Settings