Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB01g01502 Brassica carinata HOM05D004489 ORTHO05D094885 1.4e-88 329.7 188 100.0
BcaB06g26545 Brassica carinata HOM05D004489 ORTHO05D095075 7.0e-43 177.9 181 59.1
BcaB02g10531 Brassica carinata HOM05D004489 ORTHO05D094500 1.9e-40 169.9 156 64.1
C08p08580 Brassica napus HOM05D004489 ORTHO05D010056 3.1e-38 162.5 170 56.5
BcaC07g37389 Brassica carinata HOM05D004489 ORTHO05D010056 4.4e-37 158.7 167 56.3
BolC8t47699H Brassica oleracea HOM05D004489 ORTHO05D010056 4.4e-37 158.7 167 56.3
BcaC02g11524 Brassica carinata HOM05D004489 ORTHO05D010056 8.6e-33 144.4 168 55.4
BcaB03g16202 Brassica carinata HOM05D004489 ORTHO05D093905 5.6e-32 141.7 129 63.6
BcaB05g24918 Brassica carinata HOM05D004489 ORTHO05D092070 8.1e-31 137.9 146 56.8
BcaC06g36060 Brassica carinata HOM05D004489 ORTHO05D092528 5.2e-30 135.2 146 56.2
BcaC08g45661 Brassica carinata HOM05D004489 ORTHO05D010056 6.8e-30 134.8 173 49.7
BcaB01g01689 Brassica carinata HOM05D004489 ORTHO05D095684 3.4e-29 132.5 141 57.4
BcaC02g07770 Brassica carinata HOM05D004489 ORTHO05D010056 5.8e-29 131.7 173 50.3
BcaC03g16680 Brassica carinata HOM05D004489 ORTHO05D010056 8.4e-28 127.9 164 52.4
BcaC09g51560 Brassica carinata HOM05D004489 ORTHO05D010056 1.1e-27 127.5 171 49.7
BcaB08g35381 Brassica carinata HOM05D004489 ORTHO05D091739 5.4e-27 125.2 177 49.7
C09p39590 Brassica napus HOM05D004489 ORTHO05D010056 5.4e-27 125.2 173 48.6
BcaC07g38382 Brassica carinata HOM05D004489 ORTHO05D010056 7.1e-27 124.8 171 48.5
BcaC04g20751 Brassica carinata HOM05D004489 ORTHO05D010056 9.2e-27 124.4 171 49.1
A05p21780 Brassica napus HOM05D004489 ORTHO05D027587 9.2e-27 124.4 101 68.3
BraA05t21099Z Brassica rapa HOM05D004489 ORTHO05D027587 9.2e-27 124.4 101 68.3
BcaC01g01829 Brassica carinata HOM05D004489 ORTHO05D010056 1.2e-26 124.0 162 49.4
BcaC04g22067 Brassica carinata HOM05D004489 ORTHO05D027587 2.1e-26 123.2 147 51.7
C07p01860 Brassica napus HOM05D004489 ORTHO05D010056 2.1e-26 123.2 150 51.3
BcaB04g17396 Brassica carinata HOM05D004489 ORTHO05D095687 6.0e-26 121.7 144 53.5
C05p26780 Brassica napus HOM05D004489 ORTHO05D010056 1.0e-25 120.9 187 43.3
BcaC04g20631 Brassica carinata HOM05D004489 ORTHO05D010056 1.7e-25 120.2 140 52.1
C02p47420 Brassica napus HOM05D004489 ORTHO05D010056 1.7e-25 120.2 156 50.0
C09p41300 Brassica napus HOM05D004489 ORTHO05D010056 1.7e-25 120.2 140 52.1
C07p23290 Brassica napus HOM05D004489 ORTHO05D010056 1.1e-24 117.5 162 50.0
BolC8t47151H Brassica oleracea HOM05D004489 ORTHO05D010056 1.9e-24 116.7 171 46.2
C01p35260 Brassica napus HOM05D004489 ORTHO05D010056 2.5e-24 116.3 171 46.8
C07p03810 Brassica napus HOM05D004489 ORTHO05D010056 5.6e-24 115.2 148 49.3
BcaNung03342 Brassica carinata HOM05D004489 ORTHO05D010056 7.3e-24 114.8 143 52.4
C09p20870 Brassica napus HOM05D004489 ORTHO05D010056 9.6e-24 114.4 171 46.8
BolC9t54984H Brassica oleracea HOM05D004489 ORTHO05D010056 9.6e-24 114.4 171 46.8
BolC7t40773H Brassica oleracea HOM05D004489 ORTHO05D010056 1.6e-23 113.6 149 49.0
BcaC04g22095 Brassica carinata HOM05D004489 ORTHO05D000493 2.1e-23 113.2 148 48.6
BolC9t55268H Brassica oleracea HOM05D004489 ORTHO05D010056 2.1e-23 113.2 148 48.6
BolC9t55309H Brassica oleracea HOM05D004489 ORTHO05D027587 3.6e-23 112.5 96 66.7
BolC1t03483H Brassica oleracea HOM05D004489 ORTHO05D010056 6.2e-23 111.7 171 45.6
A06p23470 Brassica napus HOM05D004489 ORTHO05D010056 8.1e-23 111.3 162 49.4
BcaB06g27095 Brassica carinata HOM05D004489 ORTHO05D095035 1.4e-22 110.5 104 61.5
BcaC07g38503 Brassica carinata HOM05D004489 ORTHO05D010056 1.8e-22 110.2 129 54.3
BcaC03g14954 Brassica carinata HOM05D004489 ORTHO05D010056 3.1e-22 109.4 148 48.0
BolC2t08562H Brassica oleracea HOM05D004489 ORTHO05D010056 3.1e-22 109.4 140 49.3
BcaC05g29022 Brassica carinata HOM05D004489 ORTHO05D010056 5.2e-22 108.6 152 48.0
C05p52380 Brassica napus HOM05D004489 ORTHO05D010056 5.2e-22 108.6 152 48.0
C06p10210 Brassica napus HOM05D004489 ORTHO05D010056 1.5e-21 107.1 161 44.1
BcaB04g18048 Brassica carinata HOM05D004489 ORTHO05D091089 2.0e-21 106.7 96 64.6
C09p34080 Brassica napus HOM05D004489 ORTHO05D010056 2.0e-21 106.7 141 47.5
BolC9t56245H Brassica oleracea HOM05D004489 ORTHO05D010056 3.4e-21 105.9 140 47.9
C01p35220 Brassica napus HOM05D004489 ORTHO05D010056 5.8e-21 105.1 140 47.9
C06p25970 Brassica napus HOM05D004489 ORTHO05D021897 5.8e-21 105.1 140 47.1
BolC5t30898H Brassica oleracea HOM05D004489 ORTHO05D010056 5.8e-21 105.1 140 46.4
C03p64090 Brassica napus HOM05D004489 ORTHO05D010056 9.9e-21 104.4 140 46.4
BolC3t18663H Brassica oleracea HOM05D004489 ORTHO05D010056 9.9e-21 104.4 140 46.4
C05p22010 Brassica napus HOM05D004489 ORTHO05D010056 1.7e-20 103.6 140 45.7
C01p30160 Brassica napus HOM05D004489 ORTHO05D010056 3.8e-20 102.4 120 51.7
BolC7t42604H Brassica oleracea HOM05D004489 ORTHO05D010056 3.8e-20 102.4 110 53.6
C08p18050 Brassica napus HOM05D004489 ORTHO05D021897 1.4e-19 100.5 141 44.7
BolC8t49437H Brassica oleracea HOM05D004489 ORTHO05D021897 1.4e-19 100.5 141 44.7
C06p26040 Brassica napus HOM05D004489 ORTHO05D010056 3.2e-19 99.4 108 52.8
C02p21030 Brassica napus HOM05D004489 ORTHO05D010056 9.3e-19 97.8 184 39.7
BraA04t16648Z Brassica rapa HOM05D004489 ORTHO05D018788 9.3e-19 97.8 150 47.3
BcaB01g01214 Brassica carinata HOM05D004489 ORTHO05D000740 2.7e-18 96.3 186 39.8
BcaC04g19493 Brassica carinata HOM05D004489 ORTHO05D010056 2.7e-18 96.3 87 63.2
BolC7t42863H Brassica oleracea HOM05D004489 ORTHO05D010056 4.6e-18 95.5 114 52.6
BcaC05g26196 Brassica carinata HOM05D004489 ORTHO05D010056 1.0e-17 94.4 164 41.5
C08p11390 Brassica napus HOM05D004489 ORTHO05D010056 1.0e-17 94.4 92 59.8
C02p57490 Brassica napus HOM05D004489 ORTHO05D010056 1.7e-17 93.6 111 50.5
BcaB07g33397 Brassica carinata HOM05D004489 ORTHO05D000740 2.3e-17 93.2 176 40.3
BcaC04g22309 Brassica carinata HOM05D004489 ORTHO05D010056 3.0e-17 92.8 124 50.0
BcaC03g15256 Brassica carinata HOM05D004489 ORTHO05D010056 1.5e-16 90.5 157 43.9
BcaB03g16455 Brassica carinata HOM05D004489 ORTHO05D005643 3.3e-16 89.4 177 39.5
A07p11790 Brassica napus HOM05D004489 ORTHO05D010056 9.6e-16 87.8 110 49.1
BcaC09g48389 Brassica carinata HOM05D004489 ORTHO05D010056 3.6e-15 85.9 117 48.7
C01p27340 Brassica napus HOM05D004489 ORTHO05D010056 3.6e-15 85.9 92 56.5
C01p50400 Brassica napus HOM05D004489 ORTHO05D010056 6.2e-15 85.1 75 60.0
BcaC03g17739 Brassica carinata HOM05D004489 ORTHO05D010056 1.1e-14 84.3 75 61.3
A04p09860 Brassica napus HOM05D004489 ORTHO05D010056 1.1e-14 84.3 101 53.5
BolC5t31966H Brassica oleracea HOM05D004489 ORTHO05D018788 1.4e-14 84.0 125 46.4
BcaC04g18700 Brassica carinata HOM05D004489 ORTHO05D010056 2.4e-14 83.2 117 46.2
BraA06t25443Z Brassica rapa HOM05D004489 ORTHO05D010056 3.1e-14 82.8 132 46.2
C07p01700 Brassica napus HOM05D004489 ORTHO05D010056 4.0e-14 82.4 136 44.1
BcaB03g16167 Brassica carinata HOM05D004489 ORTHO05D091635 5.3e-14 82.0 167 38.9
BraA07t28964Z Brassica rapa HOM05D004489 ORTHO05D010056 1.5e-13 80.5 98 50.0
BraA09t38666Z Brassica rapa HOM05D004489 ORTHO05D010056 3.4e-13 79.3 90 54.4
BolC2t08244H Brassica oleracea HOM05D004489 ORTHO05D010056 4.5e-13 79.0 62 62.9
BcaB02g06508 Brassica carinata HOM05D004489 ORTHO05D094292 2.2e-12 76.6 147 42.2
BcaB02g11425 Brassica carinata HOM05D000888 ORTHO05D000740 2.2e-12 76.6 159 39.6
A01p27750 Brassica napus HOM05D004489 ORTHO05D000199 2.9e-12 76.3 78 56.4
BcaC01g00378 Brassica carinata HOM05D004489 ORTHO05D010056 4.9e-12 75.5 131 43.5
C09p55140 Brassica napus HOM05D004489 ORTHO05D010056 6.4e-12 75.1 62 61.3
BraA02t07746Z Brassica rapa HOM05D004489 ORTHO05D018788 6.4e-12 75.1 106 44.3
BolC4t27228H Brassica oleracea HOM05D004489 ORTHO05D018788 8.4e-12 74.7 96 49.0
BcaB08g35276 Brassica carinata HOM05D008277 ORTHO05D091063 3.2e-11 72.8 75 56.0
A01p28040 Brassica napus HOM05D004489 ORTHO05D018788 4.2e-11 72.4 141 42.6
BolC6t37769H Brassica oleracea HOM05D004489 ORTHO05D010056 7.1e-11 71.6 62 59.7
BcaB04g17639 Brassica carinata HOM05D008277 ORTHO05D011446 9.3e-11 71.2 144 40.3
BcaB05g23045 Brassica carinata HOM05D008277 ORTHO05D093753 1.2e-10 70.9 102 51.0
BcaC09g51020 Brassica carinata HOM05D004489 ORTHO05D010056 2.1e-10 70.1 103 46.6
BolC9t58376H Brassica oleracea HOM05D004489 ORTHO05D018788 2.1e-10 70.1 124 41.9
BraA07t28336Z Brassica rapa HOM05D004489 ORTHO05D018788 3.5e-10 69.3 109 45.9
BcaC06g36646 Brassica carinata HOM05D004489 ORTHO05D010056 7.9e-10 68.2 103 45.6
C07p01670 Brassica napus HOM05D008277 ORTHO05D018788 1.8e-09 67.0 81 48.1
BcaC01g03828 Brassica carinata HOM05D004489 ORTHO05D010056 2.3e-09 66.6 71 52.1
BcaC05g28262 Brassica carinata HOM05D004489 ORTHO05D010056 5.1e-09 65.5 103 44.7
BcaC04g21271 Brassica carinata HOM05D004489 ORTHO05D039740 1.1e-08 64.3 115 36.5
BcaB07g33270 Brassica carinata HOM05D000888 ORTHO05D000740 1.5e-08 63.9 125 37.6
C07p20720 Brassica napus HOM05D004489 ORTHO05D010056 3.3e-08 62.8 101 43.6
C02p24700 Brassica napus HOM05D004489 ORTHO05D098125 4.3e-08 62.4 99 44.4
C07p01280 Brassica napus HOM05D004489 ORTHO05D098218 5.6e-08 62.0 71 47.9
A05p19170 Brassica napus HOM05D004489 ORTHO05D027759 7.4e-08 61.6 51 62.7
BraA05t20820Z Brassica rapa HOM05D004489 ORTHO05D027759 9.6e-08 61.2 51 62.7
BcaB08g35275 Brassica carinata HOM05D004489 ORTHO05D093088 2.8e-07 59.7 79 50.6
C09p37510 Brassica napus HOM05D004489 ORTHO05D032456 3.7e-07 59.3 82 53.7
BolC9t56581H Brassica oleracea HOM05D004489 ORTHO05D032456 3.7e-07 59.3 82 53.7
BcaC03g16777 Brassica carinata HOM05D004489 ORTHO05D027759 4.8e-07 58.9 51 58.8
BolC2t10703H Brassica oleracea HOM05D004489 ORTHO05D027759 4.8e-07 58.9 51 58.8
BcaB04g17006 Brassica carinata HOM05D004489 ORTHO05D092589 1.1e-06 57.8 72 54.2
BcaC05g26627 Brassica carinata HOM05D004489 ORTHO05D010056 1.8e-06 57.0 95 42.1
BcaC07g37478 Brassica carinata HOM05D004489 ORTHO05D010056 1.8e-06 57.0 93 44.1
BcaC08g44969 Brassica carinata HOM05D004489 ORTHO05D010056 9.0e-06 54.7 37 70.3


User provided reference genes

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