Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB01g01371 Brassica carinata HOM05D001498 ORTHO05D091381 2.1e-76 289.3 182 100.0
BcaB07g33213 Brassica carinata HOM05D001498 ORTHO05D090837 5.8e-34 148.3 99 89.9
BcaB05g22880 Brassica carinata HOM05D001498 ORTHO05D019959 2.9e-33 146.0 98 81.6
BolC5t31266H Brassica oleracea HOM05D001498 ORTHO05D019959 3.0e-22 109.4 180 45.0
BcaB02g11218 Brassica carinata HOM05D001224 ORTHO05D010571 4.3e-21 105.5 177 51.4
BcaC02g11926 Brassica carinata HOM05D001498 ORTHO05D019959 1.6e-20 103.6 106 54.7
BcaC05g27663 Brassica carinata HOM05D001498 ORTHO05D090842 4.5e-18 95.5 200 40.0
BolC4t23616H Brassica oleracea HOM05D001498 ORTHO05D016694 3.8e-17 92.4 175 44.6
C04p20860 Brassica napus HOM05D001498 ORTHO05D016694 4.9e-17 92.0 175 44.6
BcaC06g36329 Brassica carinata HOM05D001498 ORTHO05D096194 6.4e-17 91.7 178 38.8
BcaC02g11068 Brassica carinata HOM05D001498 ORTHO05D016694 3.2e-16 89.4 176 44.9
BcaC06g35524 Brassica carinata HOM05D001498 ORTHO05D016694 3.2e-16 89.4 180 44.4
BcaB02g10765 Brassica carinata HOM05D001498 ORTHO05D095468 1.6e-15 87.0 166 44.0
BolC9t57107H Brassica oleracea HOM05D001498 ORTHO05D016694 1.6e-15 87.0 175 45.1
BcaB01g01185 Brassica carinata HOM05D001498 ORTHO05D019959 3.5e-15 85.9 174 38.5
C07p06210 Brassica napus HOM05D001498 ORTHO05D032253 3.5e-15 85.9 157 46.5
C09p42290 Brassica napus HOM05D001498 ORTHO05D016694 4.6e-15 85.5 175 44.6
BcaB07g33084 Brassica carinata HOM05D001498 ORTHO05D092207 7.9e-15 84.7 76 55.3
BolC7t41038H Brassica oleracea HOM05D001498 ORTHO05D032253 1.0e-14 84.3 157 45.9
BcaB07g33217 Brassica carinata HOM05D001498 ORTHO05D093085 2.3e-14 83.2 76 55.3
BcaB06g27205 Brassica carinata HOM05D001498 ORTHO05D091204 3.9e-14 82.4 93 51.6
BcaB04g18314 Brassica carinata HOM05D001498 ORTHO05D095953 5.1e-14 82.0 73 53.4
BcaB05g22943 Brassica carinata HOM05D001498 ORTHO05D096110 6.7e-14 81.6 73 53.4
BcaB05g24509 Brassica carinata HOM05D001379 ORTHO05D001277 1.5e-13 80.5 64 65.6
BcaC04g20545 Brassica carinata HOM05D001498 ORTHO05D016694 1.5e-13 80.5 165 46.7
BcaC06g36230 Brassica carinata HOM05D001498 ORTHO05D032253 1.9e-13 80.1 152 46.1
BcaB04g17678 Brassica carinata HOM05D001498 ORTHO05D094760 2.5e-13 79.7 107 42.1
BcaB05g23077 Brassica carinata HOM05D001498 ORTHO05D091436 2.5e-13 79.7 73 50.7
BcaB05g23244 Brassica carinata HOM05D001498 ORTHO05D095601 3.3e-13 79.3 76 52.6
BcaB06g26727 Brassica carinata HOM05D001498 ORTHO05D093134 3.3e-13 79.3 76 55.3
BcaB07g33315 Brassica carinata HOM05D001498 ORTHO05D091495 3.3e-13 79.3 73 50.7
BcaB01g03187 Brassica carinata HOM05D001498 ORTHO05D090608 5.6e-13 78.6 107 41.1
C05p25290 Brassica napus HOM05D001498 ORTHO05D019959 7.4e-13 78.2 100 47.0
BcaB06g27273 Brassica carinata HOM05D001498 ORTHO05D094467 1.3e-12 77.4 76 51.3
BcaB07g33754 Brassica carinata HOM05D001498 ORTHO05D092729 2.8e-12 76.3 68 52.9
BcaB05g23246 Brassica carinata HOM05D001498 ORTHO05D090900 3.6e-12 75.9 73 49.3
BcaB01g01484 Brassica carinata HOM05D001498 ORTHO05D091615 4.8e-12 75.5 129 38.8
BcaB07g32989 Brassica carinata HOM05D001498 ORTHO05D008559 4.8e-12 75.5 125 38.4
C09p16580 Brassica napus HOM05D001498 ORTHO05D011506 8.1e-12 74.7 170 32.4
BcaC08g44373 Brassica carinata HOM05D001498 ORTHO05D011506 1.1e-11 74.3 145 33.8
BolC2t11288H Brassica oleracea HOM05D001498 ORTHO05D011506 1.4e-11 73.9 145 33.8
BcaB04g17490 Brassica carinata HOM05D001498 ORTHO05D019959 1.8e-11 73.6 66 59.1
BcaB01g01816 Brassica carinata HOM05D001498 ORTHO05D091844 2.4e-11 73.2 67 55.2
C07p49110 Brassica napus HOM05D001498 ORTHO05D097837 3.1e-11 72.8 170 32.4
C04p21380 Brassica napus HOM05D001498 ORTHO05D013028 5.3e-11 72.0 164 32.3
BcaB08g35016 Brassica carinata HOM05D001498 ORTHO05D092631 6.9e-11 71.6 107 37.4
BcaC04g19551 Brassica carinata HOM05D001498 ORTHO05D090991 6.9e-11 71.6 76 48.7
BcaB04g17776 Brassica carinata HOM05D001498 ORTHO05D092868 9.0e-11 71.2 168 38.7
BcaB06g26483 Brassica carinata HOM05D001498 ORTHO05D095599 9.0e-11 71.2 73 46.6
BcaC09g50109 Brassica carinata HOM05D001498 ORTHO05D093510 9.0e-11 71.2 73 52.1
C01p48970 Brassica napus HOM05D001498 ORTHO05D011506 9.0e-11 71.2 73 50.7
BolC9t54653H Brassica oleracea HOM05D001498 ORTHO05D011506 1.2e-10 70.9 169 30.8
BcaB06g26648 Brassica carinata HOM05D001498 ORTHO05D094209 1.5e-10 70.5 115 41.7
BcaC05g27519 Brassica carinata HOM05D001498 ORTHO05D011506 1.5e-10 70.5 107 40.2
C03p66370 Brassica napus HOM05D001498 ORTHO05D011506 1.5e-10 70.5 107 40.2
BcaB07g33085 Brassica carinata HOM05D001498 ORTHO05D095625 2.0e-10 70.1 73 46.6
BcaC07g38657 Brassica carinata HOM05D001498 ORTHO05D011506 2.0e-10 70.1 145 32.4
C09p17600 Brassica napus HOM05D001498 ORTHO05D011506 2.0e-10 70.1 169 30.8
C09p27470 Brassica napus HOM05D001498 ORTHO05D011506 2.0e-10 70.1 73 49.3
BolC8t47367H Brassica oleracea HOM05D001498 ORTHO05D011506 2.6e-10 69.7 144 29.9
BcaB03g16152 Brassica carinata HOM05D001498 ORTHO05D093112 3.4e-10 69.3 75 46.7
BcaB07g33220 Brassica carinata HOM05D001498 ORTHO05D096371 3.4e-10 69.3 75 46.7
BcaC02g09114 Brassica carinata HOM05D001498 ORTHO05D011506 3.4e-10 69.3 145 32.4
C08p17880 Brassica napus HOM05D001498 ORTHO05D001885 3.4e-10 69.3 157 31.8
BcaB07g32913 Brassica carinata HOM05D001498 ORTHO05D091922 4.5e-10 68.9 75 46.7
BcaC08g44056 Brassica carinata HOM05D001498 ORTHO05D091470 4.5e-10 68.9 73 49.3
C06p31050 Brassica napus HOM05D001498 ORTHO05D011506 4.5e-10 68.9 107 39.3
BcaC04g20544 Brassica carinata HOM05D001498 ORTHO05D016694 7.6e-10 68.2 168 38.7
BolC1t03827H Brassica oleracea HOM05D001498 ORTHO05D011506 7.6e-10 68.2 169 33.7
BcaB03g16298 Brassica carinata HOM05D001498 ORTHO05D095831 9.9e-10 67.8 73 49.3
BcaB05g23120 Brassica carinata HOM05D001498 ORTHO05D090647 9.9e-10 67.8 75 45.3
BcaB01g01309 Brassica carinata HOM05D001498 ORTHO05D091216 1.3e-09 67.4 64 50.0
C02p52020 Brassica napus HOM05D001498 ORTHO05D011506 1.3e-09 67.4 166 30.7
C03p56230 Brassica napus HOM05D001498 ORTHO05D001885 1.3e-09 67.4 168 32.7
C01p44920 Brassica napus HOM05D001498 ORTHO05D011506 1.7e-09 67.0 169 29.6
C03p66000 Brassica napus HOM05D001498 ORTHO05D001885 2.2e-09 66.6 165 32.1
BcaB02g11279 Brassica carinata HOM05D001498 ORTHO05D095830 2.9e-09 66.2 75 45.3
BcaB06g26678 Brassica carinata HOM05D001498 ORTHO05D094527 2.9e-09 66.2 69 55.1
BolC3t19484H Brassica oleracea HOM05D001498 ORTHO05D011506 4.9e-09 65.5 167 29.9
C04p09850 Brassica napus HOM05D001498 ORTHO05D101798 8.4e-09 64.7 45 68.9
C04p36710 Brassica napus HOM05D001498 ORTHO05D001885 1.4e-08 63.9 120 34.2
C01p30520 Brassica napus HOM05D001498 ORTHO05D001885 1.9e-08 63.5 101 36.6
BolC1t02817H Brassica oleracea HOM05D001498 ORTHO05D106172 2.4e-08 63.2 125 32.0
BolC3t17911H Brassica oleracea HOM05D001498 ORTHO05D008559 3.2e-08 62.8 171 31.6
BolC8t49067H Brassica oleracea HOM05D001498 ORTHO05D011506 3.2e-08 62.8 144 29.2
BcaB03g15933 Brassica carinata HOM05D001498 ORTHO05D021639 4.2e-08 62.4 73 46.6
BcaB07g32352 Brassica carinata HOM05D001498 ORTHO05D021639 4.2e-08 62.4 73 46.6
BcaC05g25872 Brassica carinata HOM05D001498 ORTHO05D011506 4.2e-08 62.4 164 30.5
C01p38680 Brassica napus HOM05D001498 ORTHO05D011506 4.2e-08 62.4 163 32.5
C01p38770 Brassica napus HOM05D001379 ORTHO05D001277 4.2e-08 62.4 146 42.5
BolC7t40930H Brassica oleracea HOM05D001379 ORTHO05D016694 4.2e-08 62.4 140 37.1
C07p13940 Brassica napus HOM05D001379 ORTHO05D001277 7.1e-08 61.6 146 40.4
BcaC09g48967 Brassica carinata HOM05D001498 ORTHO05D011506 9.3e-08 61.2 117 33.3
A03p54380 Brassica napus HOM05D001498 ORTHO05D011506 9.3e-08 61.2 69 44.9
BcaB04g17703 Brassica carinata HOM05D001498 ORTHO05D021639 1.2e-07 60.8 73 45.2
BolC1t03834H Brassica oleracea HOM05D001379 ORTHO05D001277 1.2e-07 60.8 146 41.8
A01p28560 Brassica napus HOM05D001498 ORTHO05D021639 1.6e-07 60.5 64 46.9
A08p07550 Brassica napus HOM05D001498 ORTHO05D011506 1.6e-07 60.5 170 30.6
BcaC04g20364 Brassica carinata HOM05D001498 ORTHO05D011506 2.7e-07 59.7 98 36.7
C02p53500 Brassica napus HOM05D001498 ORTHO05D001885 2.7e-07 59.7 164 29.3
C01p30560 Brassica napus HOM05D001498 ORTHO05D011506 3.5e-07 59.3 152 30.3
BolC9t55019H Brassica oleracea HOM05D001498 ORTHO05D011506 4.6e-07 58.9 110 33.6
BcaC06g35064 Brassica carinata HOM05D001498 ORTHO05D016694 7.9e-07 58.2 143 42.7
BcaB02g11277 Brassica carinata HOM05D001498 ORTHO05D091891 1.0e-06 57.8 75 44.0
A08p09540 Brassica napus HOM05D001498 ORTHO05D011506 1.3e-06 57.4 157 29.3
BraA03t15290Z Brassica rapa HOM05D001498 ORTHO05D011506 1.3e-06 57.4 161 29.8
BraA08t32774Z Brassica rapa HOM05D001498 ORTHO05D001885 2.3e-06 56.6 169 28.4
BcaC02g10287 Brassica carinata HOM05D001498 ORTHO05D093229 3.9e-06 55.8 125 31.2
C09p21170 Brassica napus HOM05D001498 ORTHO05D011506 8.7e-06 54.7 173 29.5


User provided reference genes

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