Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB01g01345 Brassica carinata HOM05D005627 ORTHO05D092360 5.1e-151 537.7 276 100.0
BcaNung05731 Brassica carinata HOM05D005627 ORTHO05D011976 4.3e-89 332.0 218 81.2
C09p26110 Brassica napus HOM05D005627 ORTHO05D032340 1.8e-63 246.9 194 69.6
BolC7t41682H Brassica oleracea HOM05D005627 ORTHO05D011976 1.2e-62 244.2 194 67.5
C07p12150 Brassica napus HOM05D005627 ORTHO05D011976 4.5e-62 242.3 196 65.8
BcaC04g21891 Brassica carinata HOM05D005627 ORTHO05D032340 6.4e-61 238.4 190 68.9
BolC9t55514H Brassica oleracea HOM05D005627 ORTHO05D032340 6.4e-61 238.4 190 68.9
BcaC06g35244 Brassica carinata HOM05D005627 ORTHO05D011976 3.0e-50 203.0 194 62.4
BcaC03g17142 Brassica carinata HOM05D005627 ORTHO05D011976 3.3e-49 199.5 194 56.2
BcaC08g44617 Brassica carinata HOM05D005627 ORTHO05D011976 1.6e-48 197.2 194 55.7
BcaC04g21583 Brassica carinata HOM05D005627 ORTHO05D039394 5.0e-45 185.7 136 75.0
C07p18310 Brassica napus HOM05D005627 ORTHO05D011976 5.0e-45 185.7 158 65.8
BcaB02g10994 Brassica carinata HOM05D005627 ORTHO05D011976 2.1e-43 180.3 126 74.6
C09p30130 Brassica napus HOM05D005627 ORTHO05D039394 6.9e-39 165.2 136 68.4
BcaC08g46023 Brassica carinata HOM05D005627 ORTHO05D011976 1.3e-37 161.0 154 57.8
BraA06t25406Z Brassica rapa HOM05D005627 ORTHO05D011976 1.4e-36 157.5 124 65.3
BolC7t42341H Brassica oleracea HOM05D005627 ORTHO05D011976 5.5e-36 155.6 217 47.9
C07p09750 Brassica napus HOM05D005627 ORTHO05D011976 4.5e-30 136.0 147 56.5
BcaC06g35917 Brassica carinata HOM05D005627 ORTHO05D011976 6.3e-24 115.5 86 70.9
BolC7t41413H Brassica oleracea HOM05D005627 ORTHO05D011976 2.4e-23 113.6 83 72.3
C06p20890 Brassica napus HOM05D005627 ORTHO05D011976 4.2e-20 102.8 137 48.9
BolC6t37277H Brassica oleracea HOM05D005627 ORTHO05D011976 4.2e-20 102.8 137 48.9
C08p05900 Brassica napus HOM05D005627 ORTHO05D032746 9.4e-20 101.7 82 68.3
BcaC07g37195 Brassica carinata HOM05D005627 ORTHO05D032746 8.0e-19 98.6 82 67.1
BolC6t38918H Brassica oleracea HOM05D005627 ORTHO05D011976 2.0e-17 94.0 137 46.7
BolC7t41686H Brassica oleracea HOM05D005627 ORTHO05D104508 5.7e-17 92.4 91 59.3
BolC8t47416H Brassica oleracea HOM05D005627 ORTHO05D032746 4.8e-16 89.4 76 65.8
BolC2t11141H Brassica oleracea HOM05D005627 ORTHO05D107067 3.5e-14 83.2 56 76.8
BcaB05g24424 Brassica carinata HOM05D005627 ORTHO05D092049 1.1e-12 78.2 122 41.8
A06p22330 Brassica napus HOM05D005627 ORTHO05D011976 2.7e-11 73.6 161 37.9
BolC9t55878H Brassica oleracea HOM05D005627 ORTHO05D011976 4.7e-11 72.8 160 38.1
BraA06t25319Z Brassica rapa HOM05D005627 ORTHO05D011976 4.7e-11 72.8 162 37.7
BolC7t41685H Brassica oleracea HOM05D005627 ORTHO05D011976 1.5e-09 67.8 45 64.4
BcaC06g35675 Brassica carinata HOM05D005627 ORTHO05D011976 2.0e-09 67.4 45 62.2
C08p05890 Brassica napus HOM05D005627 ORTHO05D099354 7.5e-09 65.5 44 68.2


User provided reference genes

Program Settings