Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB01g01313 Brassica carinata HOM05D006142 ORTHO05D010451 6.0e-85 317.4 152 100.0
C03p78180 Brassica napus HOM05D006142 ORTHO05D016090 4.7e-45 184.9 140 57.1
BolC3t20080H Brassica oleracea HOM05D000005 ORTHO05D000449 1.4e-44 183.3 140 56.4
C08p03660 Brassica napus HOM05D006142 ORTHO05D010451 2.6e-43 179.1 132 64.4
Sp7g04550 Schrenkiella parvula HOM05D006142 ORTHO05D010451 2.5e-38 162.5 138 52.9
BcaB06g25861 Brassica carinata HOM05D006142 ORTHO05D023852 3.2e-38 162.2 141 48.9
BcaB05g22796 Brassica carinata HOM05D006142 ORTHO05D010451 2.6e-35 152.5 124 54.8
BraA02t09249Z Brassica rapa HOM05D006142 ORTHO05D023852 3.1e-33 145.6 135 48.9
C05p60180 Brassica napus HOM05D006142 ORTHO05D010451 2.0e-32 142.9 136 47.1
A02p27060 Brassica napus HOM05D006142 ORTHO05D010451 1.6e-29 133.3 133 45.9
BolC4t22346H Brassica oleracea HOM05D006142 ORTHO05D023852 1.6e-29 133.3 130 49.2
BraA02t07725Z Brassica rapa HOM05D006142 ORTHO05D010451 1.6e-29 133.3 133 45.9
Sp7g08780 Schrenkiella parvula HOM05D006142 ORTHO05D010451 2.7e-29 132.5 140 41.4
A06p29340 Brassica napus HOM05D006142 ORTHO05D010451 1.8e-28 129.8 103 51.5
BolC2t10216H Brassica oleracea HOM05D006142 ORTHO05D010451 2.3e-28 129.4 139 44.6
BraA07t29488Z Brassica rapa HOM05D006142 ORTHO05D010451 2.3e-28 129.4 132 44.7
A08p07910 Brassica napus HOM05D006142 ORTHO05D027476 3.0e-28 129.0 135 46.7
BcaC08g45575 Brassica carinata HOM05D006142 ORTHO05D023852 2.6e-27 125.9 113 51.3
C04p22760 Brassica napus HOM05D006142 ORTHO05D027476 2.6e-27 125.9 135 45.9
BolC7t42721H Brassica oleracea HOM05D006142 ORTHO05D010451 3.4e-27 125.6 132 43.9
C04p19380 Brassica napus HOM05D006142 ORTHO05D024119 4.4e-27 125.2 136 44.1
BolC4t23470H Brassica oleracea HOM05D006142 ORTHO05D024119 4.4e-27 125.2 136 44.1
Sp1g31670 Schrenkiella parvula HOM05D006142 ORTHO05D010451 5.7e-27 124.8 138 42.0
BcaC02g12101 Brassica carinata HOM05D006142 ORTHO05D010451 1.8e-25 119.8 106 49.1
BcaB08g36277 Brassica carinata HOM05D006142 ORTHO05D010451 1.2e-24 117.1 106 50.0
Sp7g08100 Schrenkiella parvula HOM05D006142 ORTHO05D010451 4.5e-24 115.2 131 45.0
Sp5g17600 Schrenkiella parvula HOM05D006142 ORTHO05D010451 1.3e-23 113.6 140 38.6
BraA09t38560Z Brassica rapa HOM05D006142 ORTHO05D010451 2.2e-23 112.8 83 51.8
BcaC05g29081 Brassica carinata HOM05D006142 ORTHO05D010451 1.1e-22 110.5 132 42.4
BcaC01g01856 Brassica carinata HOM05D006142 ORTHO05D020039 1.9e-22 109.8 145 38.6
Sp6g12110 Schrenkiella parvula HOM05D006142 ORTHO05D010451 3.2e-22 109.0 136 36.8
BcaB07g33111 Brassica carinata HOM05D006142 ORTHO05D010451 5.5e-22 108.2 111 48.6
Sp3g28050 Schrenkiella parvula HOM05D006142 ORTHO05D010451 1.2e-19 100.5 115 40.0
BolC4t25939H Brassica oleracea HOM05D006142 ORTHO05D023852 4.4e-19 98.6 109 45.9
Sp3g26800 Schrenkiella parvula HOM05D006142 ORTHO05D010451 5.7e-19 98.2 111 41.4
C01p40720 Brassica napus HOM05D006142 ORTHO05D010451 2.8e-18 95.9 90 46.7
Sp2g07350 Schrenkiella parvula HOM05D006142 ORTHO05D010451 2.8e-18 95.9 113 46.0
C06p09180 Brassica napus HOM05D006142 ORTHO05D010451 4.9e-18 95.1 111 43.2
BcaC05g26353 Brassica carinata HOM05D006142 ORTHO05D010451 6.3e-18 94.7 96 45.8
BcaNung03606 Brassica carinata HOM05D006142 ORTHO05D024119 7.0e-17 91.3 84 50.0
C04p39390 Brassica napus HOM05D006142 ORTHO05D010451 9.2e-17 90.9 94 47.9
Sp7g09160 Schrenkiella parvula HOM05D006142 ORTHO05D010451 3.5e-16 89.0 113 39.8
Sp2g07140 Schrenkiella parvula HOM05D006142 ORTHO05D010451 3.8e-15 85.5 83 49.4
Sp5g17870 Schrenkiella parvula HOM05D006142 ORTHO05D010451 3.8e-15 85.5 140 31.4
BolC8t47201H Brassica oleracea HOM05D006142 ORTHO05D010451 6.6e-15 84.7 82 47.6
BraA08t32811Z Brassica rapa HOM05D006142 ORTHO05D027476 6.6e-15 84.7 82 47.6
Carub.0002s1003 Capsella rubella HOM05D006142 ORTHO05D010451 1.5e-14 83.6 108 35.2
C03p71310 Brassica napus HOM05D006142 ORTHO05D010451 2.5e-14 82.8 117 37.6
Sp2g08200 Schrenkiella parvula HOM05D006142 ORTHO05D010451 4.3e-14 82.0 87 46.0
BraA09t37555Z Brassica rapa HOM05D006142 ORTHO05D028221 5.6e-14 81.6 104 40.4
BcaC02g09206 Brassica carinata HOM05D006142 ORTHO05D031894 7.3e-14 81.3 107 40.2
BraA02t07853Z Brassica rapa HOM05D006142 ORTHO05D020039 9.5e-14 80.9 104 36.5
Sp1g33280 Schrenkiella parvula HOM05D006142 ORTHO05D010451 1.2e-13 80.5 76 44.7
A01p22910 Brassica napus HOM05D006142 ORTHO05D020039 2.8e-13 79.3 104 35.6
BraA01t02204Z Brassica rapa HOM05D006142 ORTHO05D020039 2.8e-13 79.3 104 35.6
A08p11630 Brassica napus HOM05D006142 ORTHO05D010451 6.1e-13 78.2 81 46.9
Sp2g05510 Schrenkiella parvula HOM05D006142 ORTHO05D010451 1.4e-12 77.0 73 47.9
Sp4g08110 Schrenkiella parvula HOM05D006142 ORTHO05D010451 1.4e-12 77.0 101 41.6
A07p36220 Brassica napus HOM05D006142 ORTHO05D010451 2.3e-12 76.3 81 46.9
Sp2g07090 Schrenkiella parvula HOM05D006142 ORTHO05D010451 4.0e-12 75.5 91 39.6
Sp3g25980 Schrenkiella parvula HOM05D006142 ORTHO05D010451 5.2e-12 75.1 72 45.8
Sp7g09080 Schrenkiella parvula HOM05D006142 ORTHO05D371143 2.6e-11 72.8 75 44.0
BcaB01g04266 Brassica carinata HOM05D006142 ORTHO05D010451 4.4e-11 72.0 65 43.1
BolC8t48132H Brassica oleracea HOM05D006142 ORTHO05D020039 4.4e-11 72.0 103 35.9
BcaB08g35137 Brassica carinata HOM05D006142 ORTHO05D010451 7.5e-11 71.2 74 43.2
SpUn0094_0020 Schrenkiella parvula HOM05D006142 ORTHO05D010451 9.8e-11 70.9 87 37.9
BcaC09g49266 Brassica carinata HOM05D006142 ORTHO05D010451 2.9e-10 69.3 63 47.6
Sp3g24640 Schrenkiella parvula HOM05D006142 ORTHO05D010451 2.9e-10 69.3 72 44.4
C07p04730 Brassica napus HOM05D006142 ORTHO05D020039 6.4e-10 68.2 69 40.6
C07p32990 Brassica napus HOM05D013216 ORTHO05D015524 6.4e-10 68.2 101 40.6
BolC7t41641H Brassica oleracea HOM05D013216 ORTHO05D015524 6.4e-10 68.2 101 40.6
C07p23800 Brassica napus HOM05D013216 ORTHO05D015524 8.3e-10 67.8 101 40.6
A03p39270 Brassica napus HOM05D009010 ORTHO05D020226 4.1e-09 65.5 123 26.8
C09p61280 Brassica napus HOM05D006142 ORTHO05D010451 5.4e-09 65.1 56 41.1
Sp6g35200 Schrenkiella parvula HOM05D006142 ORTHO05D010451 1.6e-08 63.5 63 46.0
BcaC05g29818 Brassica carinata HOM05D006142 ORTHO05D010451 7.8e-08 61.2 72 37.5
BraA04t16729Z Brassica rapa HOM05D013216 ORTHO05D015524 7.8e-08 61.2 95 37.9
Sp5g17680 Schrenkiella parvula HOM05D006142 ORTHO05D371242 1.3e-07 60.5 90 38.9
BraA04t16483Z Brassica rapa HOM05D008389 ORTHO05D010630 3.0e-07 59.3 119 29.4
BcaC02g11474 Brassica carinata HOM05D010688 ORTHO05D010630 3.9e-07 58.9 100 29.0
Sp4g09320 Schrenkiella parvula HOM05D006142 ORTHO05D010451 3.9e-07 58.9 77 41.6
Sp3g24910 Schrenkiella parvula HOM05D006142 ORTHO05D010451 5.0e-07 58.5 50 50.0
C01p31590 Brassica napus HOM05D013216 ORTHO05D015524 6.6e-07 58.2 52 53.8
BcaC03g14611 Brassica carinata HOM05D006142 ORTHO05D010451 8.6e-07 57.8 77 35.1
BolC9t56387H Brassica oleracea HOM05D008389 ORTHO05D010630 8.6e-07 57.8 119 28.6
BcaC05g28527 Brassica carinata HOM05D010688 ORTHO05D010630 1.1e-06 57.4 100 28.0
C03p78200 Brassica napus HOM05D008389 ORTHO05D010630 2.5e-06 56.2 124 30.6
BraA09t38570Z Brassica rapa HOM05D008389 ORTHO05D010630 2.5e-06 56.2 119 28.6
BcaC03g14592 Brassica carinata HOM05D010688 ORTHO05D010630 3.3e-06 55.8 100 28.0
BcaC07g41437 Brassica carinata HOM05D010688 ORTHO05D010630 3.3e-06 55.8 100 28.0
BcaC05g28389 Brassica carinata HOM05D006142 ORTHO05D010451 4.3e-06 55.5 62 41.9
BolC6t38699H Brassica oleracea HOM05D008389 ORTHO05D010630 4.3e-06 55.5 117 29.1
BcaC04g19940 Brassica carinata HOM05D006142 ORTHO05D010451 5.6e-06 55.1 59 45.8
C05p16070 Brassica napus HOM05D006142 ORTHO05D010451 5.6e-06 55.1 71 35.2
BolC7t41797H Brassica oleracea HOM05D008389 ORTHO05D010630 7.3e-06 54.7 121 24.8


User provided reference genes

Program Settings