Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB01g01302 Brassica carinata HOM05D008073 ORTHO05D000309 7.6e-39 163.3 80 100.0
BcaB06g28129 Brassica carinata HOM05D008073 ORTHO05D000309 6.9e-32 140.2 74 90.5
BcaB03g16062 Brassica carinata HOM05D008073 ORTHO05D000309 1.5e-31 139.0 74 89.2
A04p08080 Brassica napus HOM05D008073 ORTHO05D000309 7.7e-31 136.7 74 87.8
BraA04t16496Z Brassica rapa HOM05D008073 ORTHO05D000309 7.7e-31 136.7 74 87.8
A01p24520 Brassica napus HOM05D008073 ORTHO05D000309 1.3e-30 136.0 74 87.8
BcaC06g35486 Brassica carinata HOM05D008073 ORTHO05D000309 1.4e-29 132.5 74 86.5
BcaC06g36281 Brassica carinata HOM05D008073 ORTHO05D000309 3.2e-29 131.3 74 85.1
BcaB02g11157 Brassica carinata HOM05D008073 ORTHO05D000309 5.5e-29 130.6 74 85.1
BcaC04g20561 Brassica carinata HOM05D008073 ORTHO05D000309 7.2e-29 130.2 74 83.8
C09p42090 Brassica napus HOM05D008073 ORTHO05D000309 7.2e-29 130.2 74 83.8
C07p15530 Brassica napus HOM05D008073 ORTHO05D000309 1.2e-28 129.4 74 85.1
C07p05860 Brassica napus HOM05D001957 ORTHO05D002015 1.6e-28 129.0 74 83.8
BcaB02g10845 Brassica carinata HOM05D008073 ORTHO05D000309 1.4e-27 125.9 74 82.4
BcaC03g17928 Brassica carinata HOM05D008073 ORTHO05D000309 3.0e-27 124.8 74 81.1
BcaB06g28160 Brassica carinata HOM05D008073 ORTHO05D000309 1.1e-26 122.9 74 78.4
BolC7t43639H Brassica oleracea HOM05D008073 ORTHO05D000309 2.6e-18 95.1 68 67.6
BcaB05g24067 Brassica carinata HOM05D008073 ORTHO05D031741 5.7e-18 94.0 71 66.2
BcaB08g36370 Brassica carinata HOM05D008073 ORTHO05D000309 1.3e-17 92.8 70 62.9
BcaNung00231 Brassica carinata HOM05D008073 ORTHO05D000309 1.7e-17 92.4 76 59.2
BcaB01g01612 Brassica carinata HOM05D008073 ORTHO05D000309 2.8e-17 91.7 70 62.9
A02p37000 Brassica napus HOM05D008073 ORTHO05D000309 1.4e-16 89.4 69 60.9
BraA02t08687Z Brassica rapa HOM05D008073 ORTHO05D000309 1.4e-16 89.4 69 60.9
BcaC01g02160 Brassica carinata HOM05D008073 ORTHO05D000309 3.1e-16 88.2 67 64.2
C03p68050 Brassica napus HOM05D008073 ORTHO05D000309 3.1e-16 88.2 67 64.2
BcaC07g37763 Brassica carinata HOM05D008073 ORTHO05D000309 1.9e-13 79.0 70 55.7
A08p09520 Brassica napus HOM05D008073 ORTHO05D031741 2.7e-12 75.1 60 65.0
BolC8t48149H Brassica oleracea HOM05D008073 ORTHO05D000309 4.7e-12 74.3 52 67.3
C09p42360 Brassica napus HOM05D008073 ORTHO05D000309 2.4e-08 62.0 52 51.9
BolC9t57115H Brassica oleracea HOM05D008073 ORTHO05D000309 2.4e-08 62.0 52 51.9
A07p31530 Brassica napus HOM05D008073 ORTHO05D000309 4.1e-08 61.2 55 50.9
BcaC09g50115 Brassica carinata HOM05D008073 ORTHO05D000309 1.6e-07 59.3 54 55.6
A05p13640 Brassica napus HOM05D008073 ORTHO05D000309 2.0e-07 58.9 37 64.9
AT5G33393 Arabidopsis thaliana HOM05D008073 ORTHO05D081038 2.7e-07 58.5 64 48.4
BcaB04g19293 Brassica carinata HOM05D008073 ORTHO05D000309 2.7e-07 58.5 60 46.7
BcaB03g15638 Brassica carinata HOM05D008073 ORTHO05D000309 3.5e-07 58.2 59 49.2
BcaC06g36745 Brassica carinata HOM05D008073 ORTHO05D031794 3.5e-07 58.2 63 44.4
AT1G67235 Arabidopsis thaliana HOM05D008073 ORTHO05D000309 4.5e-07 57.8 49 55.1
BcaB01g00830 Brassica carinata HOM05D008073 ORTHO05D000309 4.5e-07 57.8 60 46.7
C01p21890 Brassica napus HOM05D008073 ORTHO05D000309 4.5e-07 57.8 25 84.0
BolC1t02116H Brassica oleracea HOM05D008073 ORTHO05D000309 4.5e-07 57.8 25 84.0
BolC1t03302H Brassica oleracea HOM05D008073 ORTHO05D000309 1.7e-06 55.8 52 51.9
BcaB04g18140 Brassica carinata HOM05D008073 ORTHO05D000309 3.8e-06 54.7 29 72.4
BcaB05g25086 Brassica carinata HOM05D008073 ORTHO05D000309 6.5e-06 53.9 38 57.9
BcaB06g26984 Brassica carinata HOM05D008073 ORTHO05D000309 6.5e-06 53.9 38 57.9
BcaC03g14649 Brassica carinata HOM05D008073 ORTHO05D000309 8.5e-06 53.5 49 53.1


User provided reference genes

Program Settings