Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB01g01282 Brassica carinata HOM05D000471 ORTHO05D013512 5.4e-43 177.2 85 100.0
BcaB01g01231 Brassica carinata HOM05D000033 ORTHO05D002890 9.6e-32 139.8 77 89.6
BcaB07g30571 Brassica carinata HOM05D000471 ORTHO05D013512 2.9e-28 128.3 78 80.8
BcaB01g01042 Brassica carinata HOM05D000471 ORTHO05D013512 3.5e-26 121.3 79 75.9
BcaB06g27194 Brassica carinata HOM05D000471 ORTHO05D013512 2.3e-25 118.6 79 74.7
BcaB06g26400 Brassica carinata HOM05D000471 ORTHO05D013512 8.7e-25 116.7 79 73.4
BcaB04g17513 Brassica carinata HOM05D000471 ORTHO05D013512 9.6e-24 113.2 78 73.1
BcaB02g11101 Brassica carinata HOM05D000471 ORTHO05D013512 6.2e-23 110.5 53 94.3
BcaB05g21756 Brassica carinata HOM05D000471 ORTHO05D013512 6.2e-23 110.5 78 73.1
BcaB01g01319 Brassica carinata HOM05D000471 ORTHO05D013512 1.5e-21 105.9 52 92.3
BcaB06g27261 Brassica carinata HOM05D000471 ORTHO05D000199 5.1e-17 90.9 40 100.0
BcaB05g23013 Brassica carinata HOM05D000471 ORTHO05D013512 1.1e-16 89.7 76 61.8
BcaB04g17807 Brassica carinata HOM05D027128 ORTHO05D013512 5.7e-16 87.4 58 77.6
BcaB01g01421 Brassica carinata HOM05D000471 ORTHO05D000199 4.8e-15 84.3 37 97.3
BolC5t32495H Brassica oleracea HOM05D000471 ORTHO05D000199 8.2e-15 83.6 88 53.4
C04p46520 Brassica napus HOM05D000471 ORTHO05D000199 1.0e-12 76.6 82 48.8
C08p07950 Brassica napus HOM05D000471 ORTHO05D000199 1.3e-12 76.3 61 59.0
BolC7t41220H Brassica oleracea HOM05D000471 ORTHO05D000199 2.2e-12 75.5 58 63.8
C04p33860 Brassica napus HOM05D000471 ORTHO05D013512 8.5e-12 73.6 76 56.6
BraA09t38532Z Brassica rapa HOM05D000471 ORTHO05D000199 5.5e-11 70.9 80 46.2
A09p29660 Brassica napus HOM05D000471 ORTHO05D000199 7.2e-11 70.5 79 46.8
C01p37480 Brassica napus HOM05D000471 ORTHO05D000199 7.2e-11 70.5 105 43.8
BolC1t03718H Brassica oleracea HOM05D000471 ORTHO05D000199 7.2e-11 70.5 105 43.8
BolC8t48263H Brassica oleracea HOM05D000471 ORTHO05D000199 1.2e-10 69.7 103 42.7
A07p40940 Brassica napus HOM05D000471 ORTHO05D000199 1.6e-10 69.3 93 39.8
C09p27730 Brassica napus HOM05D000471 ORTHO05D000199 1.6e-10 69.3 86 46.5
BolC6t37107H Brassica oleracea HOM05D000471 ORTHO05D013512 1.6e-10 69.3 64 54.7
C02p12330 Brassica napus HOM05D000471 ORTHO05D000199 2.1e-10 68.9 110 40.0
A08p30620 Brassica napus HOM05D000471 ORTHO05D000199 6.1e-10 67.4 93 38.7
A10p14660 Brassica napus HOM05D000471 ORTHO05D000199 6.1e-10 67.4 93 38.7
C01p25040 Brassica napus HOM05D000471 ORTHO05D000199 1.0e-09 66.6 100 41.0
A05p26660 Brassica napus HOM05D000471 ORTHO05D000199 1.4e-09 66.2 96 39.6
C04p28660 Brassica napus HOM05D000471 ORTHO05D000199 2.3e-09 65.5 96 40.6
C06p16710 Brassica napus HOM05D000471 ORTHO05D000199 2.3e-09 65.5 103 41.7
C08p09090 Brassica napus HOM05D000471 ORTHO05D000199 2.3e-09 65.5 85 45.9
BolC6t36870H Brassica oleracea HOM05D000471 ORTHO05D000199 2.3e-09 65.5 103 41.7
BolC8t47341H Brassica oleracea HOM05D000471 ORTHO05D000199 2.3e-09 65.5 53 60.4
C02p43170 Brassica napus HOM05D000471 ORTHO05D000199 3.0e-09 65.1 107 37.4
C03p86630 Brassica napus HOM05D000471 ORTHO05D000199 3.9e-09 64.7 99 41.4
A09p44860 Brassica napus HOM05D000471 ORTHO05D000199 5.1e-09 64.3 93 38.7
C02p34660 Brassica napus HOM05D000471 ORTHO05D000199 5.1e-09 64.3 96 39.6
BolC1t02448H Brassica oleracea HOM05D000471 ORTHO05D000199 5.1e-09 64.3 103 40.8
A05p09010 Brassica napus HOM05D000471 ORTHO05D000199 8.8e-09 63.5 93 37.6
BolC2t09360H Brassica oleracea HOM05D000471 ORTHO05D000199 8.8e-09 63.5 60 56.7
C02p16660 Brassica napus HOM05D000471 ORTHO05D000199 1.1e-08 63.2 82 47.6
C01p09260 Brassica napus HOM05D000471 ORTHO05D000199 1.5e-08 62.8 92 40.2
C05p34790 Brassica napus HOM05D000471 ORTHO05D000199 1.5e-08 62.8 96 37.5
A01p23110 Brassica napus HOM05D000471 ORTHO05D000199 3.3e-08 61.6 96 38.5
A03p66800 Brassica napus HOM05D000471 ORTHO05D000199 3.3e-08 61.6 96 38.5
C09p23420 Brassica napus HOM05D000471 ORTHO05D000199 3.3e-08 61.6 58 55.2
BolC9t55262H Brassica oleracea HOM05D000471 ORTHO05D000199 3.3e-08 61.6 58 55.2
A03p66530 Brassica napus HOM05D000471 ORTHO05D000199 4.3e-08 61.2 90 41.1
BolC6t35529H Brassica oleracea HOM05D000471 ORTHO05D000199 4.3e-08 61.2 61 54.1
A02p34120 Brassica napus HOM05D000471 ORTHO05D000199 5.7e-08 60.8 96 39.6
C02p35370 Brassica napus HOM05D000471 ORTHO05D000199 7.4e-08 60.5 61 52.5
C04p28410 Brassica napus HOM05D000471 ORTHO05D000199 7.4e-08 60.5 45 55.6
C05p37540 Brassica napus HOM05D000471 ORTHO05D000199 7.4e-08 60.5 54 44.4
C06p12300 Brassica napus HOM05D000471 ORTHO05D000199 7.4e-08 60.5 58 53.4
BolC4t24387H Brassica oleracea HOM05D000471 ORTHO05D000199 7.4e-08 60.5 45 55.6
C05p42130 Brassica napus HOM05D000471 ORTHO05D000199 9.7e-08 60.1 110 37.3
C09p23700 Brassica napus HOM05D000471 ORTHO05D000199 9.7e-08 60.1 83 42.2
BolC2t10745H Brassica oleracea HOM05D000471 ORTHO05D000199 9.7e-08 60.1 61 54.1
C03p52280 Brassica napus HOM05D000471 ORTHO05D000199 1.3e-07 59.7 61 52.5
C05p55230 Brassica napus HOM05D000471 ORTHO05D000199 1.3e-07 59.7 61 52.5
BcaC07g37770 Brassica carinata HOM05D000471 ORTHO05D000199 1.7e-07 59.3 63 49.2
C03p70580 Brassica napus HOM05D000471 ORTHO05D000199 1.7e-07 59.3 61 52.5
C05p28030 Brassica napus HOM05D000471 ORTHO05D000199 1.7e-07 59.3 56 55.4
C06p31890 Brassica napus HOM05D000471 ORTHO05D000199 1.7e-07 59.3 56 55.4
C09p44320 Brassica napus HOM05D000471 ORTHO05D000199 1.7e-07 59.3 61 50.8
C09p51680 Brassica napus HOM05D000471 ORTHO05D000199 1.7e-07 59.3 61 52.5
BolC1t01861H Brassica oleracea HOM05D000471 ORTHO05D000199 1.7e-07 59.3 61 52.5
BolC2t10008H Brassica oleracea HOM05D000471 ORTHO05D000199 1.7e-07 59.3 61 52.5
BolC3t19328H Brassica oleracea HOM05D000471 ORTHO05D000199 1.7e-07 59.3 61 52.5
BolC6t38315H Brassica oleracea HOM05D000471 ORTHO05D000199 1.7e-07 59.3 61 52.5
BolC6t38387H Brassica oleracea HOM05D000471 ORTHO05D000199 1.7e-07 59.3 56 55.4
BolC8t46987H Brassica oleracea HOM05D000471 ORTHO05D000199 1.7e-07 59.3 85 41.2
BolC8t47965H Brassica oleracea HOM05D000471 ORTHO05D000199 1.7e-07 59.3 61 52.5
BraSC36t46070Z Brassica rapa HOM05D000471 ORTHO05D000199 1.7e-07 59.3 56 51.8
C03p59330 Brassica napus HOM05D000471 ORTHO05D000199 2.2e-07 58.9 53 56.6
C06p05730 Brassica napus HOM05D000471 ORTHO05D000199 2.2e-07 58.9 61 52.5
C06p26090 Brassica napus HOM05D000471 ORTHO05D000199 2.2e-07 58.9 81 44.4
BolC6t35319H Brassica oleracea HOM05D000471 ORTHO05D000199 2.2e-07 58.9 61 52.5
BolC6t37114H Brassica oleracea HOM05D000471 ORTHO05D000199 2.2e-07 58.9 58 53.4
BolC7t44145H Brassica oleracea HOM05D000471 ORTHO05D000199 2.2e-07 58.9 61 52.5
BolC9t56743H Brassica oleracea HOM05D000471 ORTHO05D000199 2.2e-07 58.9 61 52.5
C02p40760 Brassica napus HOM05D000471 ORTHO05D000199 2.8e-07 58.5 61 52.5
C04p15090 Brassica napus HOM05D000471 ORTHO05D000199 2.8e-07 58.5 61 52.5
C04p44230 Brassica napus HOM05D000471 ORTHO05D000199 2.8e-07 58.5 61 52.5
C05p37350 Brassica napus HOM05D000471 ORTHO05D012338 2.8e-07 58.5 61 52.5
C08p06110 Brassica napus HOM05D000471 ORTHO05D000199 2.8e-07 58.5 61 50.8
BolC4t23303H Brassica oleracea HOM05D000471 ORTHO05D000199 2.8e-07 58.5 61 52.5
BolC4t27112H Brassica oleracea HOM05D000471 ORTHO05D000199 2.8e-07 58.5 58 53.4
C01p28620 Brassica napus HOM05D000471 ORTHO05D000199 3.7e-07 58.2 58 53.4
C07p11250 Brassica napus HOM05D000471 ORTHO05D000199 3.7e-07 58.2 61 52.5
C07p26370 Brassica napus HOM05D000471 ORTHO05D000199 3.7e-07 58.2 58 51.7
C09p35840 Brassica napus HOM05D000471 ORTHO05D000199 3.7e-07 58.2 58 53.4
BolC5t32478H Brassica oleracea HOM05D000471 ORTHO05D000199 3.7e-07 58.2 61 52.5
C09p57010 Brassica napus HOM05D000471 ORTHO05D000199 4.8e-07 57.8 61 52.5
BolC2t08199H Brassica oleracea HOM05D000471 ORTHO05D000199 4.8e-07 57.8 61 50.8
BolC2t09493H Brassica oleracea HOM05D000471 ORTHO05D000199 4.8e-07 57.8 61 50.8
BolC3t17480H Brassica oleracea HOM05D000471 ORTHO05D000199 4.8e-07 57.8 61 50.8
BolC3t19089H Brassica oleracea HOM05D000471 ORTHO05D000199 4.8e-07 57.8 61 50.8
BolC6t36678H Brassica oleracea HOM05D000471 ORTHO05D000199 4.8e-07 57.8 61 49.2
BolC6t36952H Brassica oleracea HOM05D000471 ORTHO05D000199 4.8e-07 57.8 61 52.5
C04p18140 Brassica napus HOM05D000471 ORTHO05D000199 6.3e-07 57.4 81 44.4
C08p22850 Brassica napus HOM05D000471 ORTHO05D000199 6.3e-07 57.4 58 51.7
BolC1t03649H Brassica oleracea HOM05D000471 ORTHO05D000199 6.3e-07 57.4 61 50.8
BolC3t19021H Brassica oleracea HOM05D000471 ORTHO05D000199 6.3e-07 57.4 58 51.7
BolC3t20113H Brassica oleracea HOM05D000471 ORTHO05D000199 6.3e-07 57.4 58 51.7
BolC4t23367H Brassica oleracea HOM05D000471 ORTHO05D000199 6.3e-07 57.4 81 44.4
BolC8t48158H Brassica oleracea HOM05D000471 ORTHO05D000199 6.3e-07 57.4 61 50.8
BolC8t49920H Brassica oleracea HOM05D000471 ORTHO05D000199 6.3e-07 57.4 58 51.7
C03p23820 Brassica napus HOM05D000471 ORTHO05D000199 8.2e-07 57.0 61 50.8
BolC2t11172H Brassica oleracea HOM05D000471 ORTHO05D000199 8.2e-07 57.0 61 50.8
BolC9t56468H Brassica oleracea HOM05D000471 ORTHO05D000199 8.2e-07 57.0 58 51.7
BcaC02g08321 Brassica carinata HOM05D000471 ORTHO05D000199 1.1e-06 56.6 56 51.8
C09p17030 Brassica napus HOM05D000471 ORTHO05D000199 1.1e-06 56.6 61 50.8
BolC9t54725H Brassica oleracea HOM05D000471 ORTHO05D000199 1.1e-06 56.6 63 49.2
C06p34710 Brassica napus HOM05D000471 ORTHO05D000199 1.4e-06 56.2 61 50.8
C07p12980 Brassica napus HOM05D000471 ORTHO05D000199 1.4e-06 56.2 58 51.7
BolC5t30926H Brassica oleracea HOM05D000471 ORTHO05D000199 1.4e-06 56.2 53 54.7
BcaB04g17946 Brassica carinata HOM05D000471 ORTHO05D013512 1.8e-06 55.8 47 66.0
C04p20310 Brassica napus HOM05D000471 ORTHO05D000199 1.8e-06 55.8 42 57.1
C09p42190 Brassica napus HOM05D000471 ORTHO05D000199 1.8e-06 55.8 56 50.0
BolC1t02540H Brassica oleracea HOM05D000471 ORTHO05D000199 1.8e-06 55.8 61 50.8
BolC9t58069H Brassica oleracea HOM05D000471 ORTHO05D000199 1.8e-06 55.8 61 49.2
C06p16800 Brassica napus HOM05D000471 ORTHO05D000199 2.4e-06 55.5 38 63.2
C06p19480 Brassica napus HOM05D000471 ORTHO05D000199 2.4e-06 55.5 61 50.8
C08p08230 Brassica napus HOM05D000471 ORTHO05D000199 2.4e-06 55.5 61 50.8
BolC3t20378H Brassica oleracea HOM05D000471 ORTHO05D000199 2.4e-06 55.5 61 49.2
BolC6t36878H Brassica oleracea HOM05D000471 ORTHO05D000199 2.4e-06 55.5 38 63.2
C03p05610 Brassica napus HOM05D000471 ORTHO05D000199 3.1e-06 55.1 59 49.2
BolC3t18903H Brassica oleracea HOM05D000471 ORTHO05D000199 3.1e-06 55.1 61 49.2
BolC7t41823H Brassica oleracea HOM05D000471 ORTHO05D000199 3.1e-06 55.1 61 49.2
C09p54980 Brassica napus HOM05D000471 ORTHO05D012338 4.1e-06 54.7 61 50.8
BolC7t43513H Brassica oleracea HOM05D000471 ORTHO05D000199 4.1e-06 54.7 54 53.7
BcaC06g35815 Brassica carinata HOM05D000471 ORTHO05D000199 5.3e-06 54.3 72 40.3
C08p20240 Brassica napus HOM05D000471 ORTHO05D000199 5.3e-06 54.3 61 47.5
C07p09920 Brassica napus HOM05D000471 ORTHO05D000199 6.9e-06 53.9 37 62.2
BolC4t23190H Brassica oleracea HOM05D000471 ORTHO05D000199 6.9e-06 53.9 58 50.0
C03p37330 Brassica napus HOM05D000471 ORTHO05D000199 9.1e-06 53.5 27 74.1
C07p04030 Brassica napus HOM05D000471 ORTHO05D000199 9.1e-06 53.5 56 51.8
BolC1t02484H Brassica oleracea HOM05D000471 ORTHO05D000199 9.1e-06 53.5 58 51.7
BolC5t32312H Brassica oleracea HOM05D000471 ORTHO05D000199 9.1e-06 53.5 61 47.5


User provided reference genes

Program Settings