Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB01g01280 Brassica carinata HOM05D003554 ORTHO05D005130 7.4e-178 627.1 316 100.0
BcaB03g16128 Brassica carinata HOM05D003554 ORTHO05D005130 2.2e-158 562.4 316 92.4
BcaB02g11541 Brassica carinata HOM05D003554 ORTHO05D005130 5.7e-154 547.7 311 90.4
BcaB04g17410 Brassica carinata HOM05D003554 ORTHO05D005130 2.2e-145 519.2 312 87.5
BcaB08g35293 Brassica carinata HOM05D003554 ORTHO05D005130 1.5e-141 506.5 310 86.1
BcaC03g16254 Brassica carinata HOM05D003554 ORTHO05D005130 2.5e-125 452.6 309 80.6
BcaB05g23503 Brassica carinata HOM05D003554 ORTHO05D008395 2.3e-70 270.0 144 91.0
Carub.0007s3074 Capsella rubella HOM05D003554 ORTHO05D005130 2.9e-57 226.5 285 44.2
BcaB02g11090 Brassica carinata HOM05D003554 ORTHO05D008395 3.0e-54 216.5 130 90.8
Carub.0002s1014 Capsella rubella HOM05D003554 ORTHO05D005130 2.5e-45 186.8 278 39.2
Carub.0001s3566 Capsella rubella HOM05D003554 ORTHO05D005130 7.7e-42 175.3 292 38.0
Carub.0006s2609 Capsella rubella HOM05D003554 ORTHO05D005130 3.8e-41 172.9 277 40.1
Carub.0002s1016 Capsella rubella HOM05D003554 ORTHO05D005130 5.0e-41 172.6 212 43.9
Carub.0004s0685 Capsella rubella HOM05D003554 ORTHO05D005130 1.1e-40 171.4 297 36.0
Aa31sc111G40 Aethionema arabicum HOM05D003554 ORTHO05D005130 1.4e-40 171.0 279 37.3
C02p33250 Brassica napus HOM05D003554 ORTHO05D005130 1.9e-40 170.6 210 44.8
Carub.0007s0014 Capsella rubella HOM05D003554 ORTHO05D005130 3.2e-40 169.9 277 40.1
Carub.0278s0001 Capsella rubella HOM05D003554 ORTHO05D005130 1.2e-39 167.9 289 36.7
Carub.0093s0002 Capsella rubella HOM05D003554 ORTHO05D005130 2.1e-39 167.2 250 39.2
Aa31LG10G9040 Aethionema arabicum HOM05D003554 ORTHO05D005130 3.6e-39 166.4 309 35.3
Carub.0002s0995 Capsella rubella HOM05D003554 ORTHO05D005130 6.1e-39 165.6 272 39.0
Carub.0002s0983 Capsella rubella HOM05D003554 ORTHO05D005130 1.8e-38 164.1 208 42.3
Carub.0002s0984 Capsella rubella HOM05D003554 ORTHO05D005130 4.8e-36 156.0 275 37.1
BraA03t14882Z Brassica rapa HOM05D004128 ORTHO05D008395 5.9e-34 149.1 294 35.4
BcaB06g26180 Brassica carinata HOM05D009532 ORTHO05D005130 5.0e-33 146.0 212 38.2
C05p37400 Brassica napus HOM05D003554 ORTHO05D005130 5.0e-33 146.0 207 40.6
C07p33860 Brassica napus HOM05D004128 ORTHO05D008395 6.5e-33 145.6 295 35.3
Aa31sc129G60 Aethionema arabicum HOM05D003554 ORTHO05D005130 1.5e-32 144.4 277 35.0
BcaB07g33411 Brassica carinata HOM05D003554 ORTHO05D008395 1.5e-32 144.4 95 89.5
Carub.0003s3367 Capsella rubella HOM05D003554 ORTHO05D005130 1.9e-32 144.1 280 33.9
BcaB08g35337 Brassica carinata HOM05D003554 ORTHO05D005130 5.2e-30 136.0 273 36.6
BolC9t56577H Brassica oleracea HOM05D004128 ORTHO05D008395 1.5e-29 134.4 188 42.0
BolC8t47837H Brassica oleracea HOM05D004128 ORTHO05D008395 5.7e-29 132.5 300 33.3
Carub.0003s2756 Capsella rubella HOM05D003554 ORTHO05D005130 5.7e-29 132.5 276 35.1
Aa31LG6G10050 Aethionema arabicum HOM05D003554 ORTHO05D005130 2.2e-28 130.6 286 33.6
BcaB02g11366 Brassica carinata HOM05D007984 ORTHO05D013027 3.7e-28 129.8 272 34.2
AL1G56530 Arabidopsis lyrata HOM05D003554 ORTHO05D005130 1.1e-27 128.3 209 34.4
AL1G56540 Arabidopsis lyrata HOM05D003554 ORTHO05D005130 1.1e-27 128.3 209 34.4
Aa31sc347G20 Aethionema arabicum HOM05D003554 ORTHO05D005130 2.0e-26 124.0 197 38.1
BcaC08g42899 Brassica carinata HOM05D003554 ORTHO05D005130 1.0e-25 121.7 278 32.0
BcaB02g10637 Brassica carinata HOM05D003554 ORTHO05D005130 1.5e-24 117.9 181 37.0
BolC2t07285H Brassica oleracea HOM05D004128 ORTHO05D008395 4.2e-24 116.3 184 36.4
AL2G17330 Arabidopsis lyrata HOM05D003554 ORTHO05D008395 9.4e-24 115.2 303 29.0
BcaNung01161 Brassica carinata HOM05D007203 ORTHO05D011558 9.4e-24 115.2 177 38.4
BolC3t19531H Brassica oleracea HOM05D003554 ORTHO05D005130 9.4e-24 115.2 141 43.3
BcaB08g35391 Brassica carinata HOM05D003554 ORTHO05D005130 1.2e-23 114.8 265 30.6
C04p26230 Brassica napus HOM05D004128 ORTHO05D008395 1.2e-23 114.8 149 43.0
BolC4t24183H Brassica oleracea HOM05D004128 ORTHO05D008395 1.2e-23 114.8 149 43.0
Aa31LG11G8070 Aethionema arabicum HOM05D003554 ORTHO05D005130 6.1e-23 112.5 183 37.7
BolC8t50772H Brassica oleracea HOM05D004128 ORTHO05D008395 1.8e-22 110.9 184 35.3
Aa31LG6G9990 Aethionema arabicum HOM05D003554 ORTHO05D005130 2.3e-22 110.5 129 44.2
BcaB01g02862 Brassica carinata HOM05D003554 ORTHO05D005130 2.3e-22 110.5 255 31.0
BolC9t55613H Brassica oleracea HOM05D004128 ORTHO05D008395 1.2e-21 108.2 184 34.8
Aa31LG6G9970 Aethionema arabicum HOM05D003554 ORTHO05D005130 1.5e-21 107.8 294 30.3
BcaB07g31822 Brassica carinata HOM05D003554 ORTHO05D032345 2.0e-21 107.5 283 29.7
BraA07t30708Z Brassica rapa HOM05D004128 ORTHO05D008395 3.4e-21 106.7 246 30.5
BraA10t42724Z Brassica rapa HOM05D004128 ORTHO05D008395 5.7e-21 105.9 260 30.8
BolC6t38472H Brassica oleracea HOM05D004128 ORTHO05D008395 9.8e-21 105.1 184 34.2
BcaB04g17902 Brassica carinata HOM05D003554 ORTHO05D005130 1.3e-20 104.8 166 38.6
AT5G24275 Arabidopsis thaliana HOM05D001081 ORTHO05D004708 2.2e-20 104.0 165 37.6
BolC3t13324H Brassica oleracea HOM05D003554 ORTHO05D008395 1.4e-19 101.3 188 33.5
THA.LOC109116563 Tarenaya hassleriana HOM05D003554 ORTHO05D005130 1.4e-19 101.3 207 30.9
C04p23890 Brassica napus HOM05D004128 ORTHO05D008395 2.4e-19 100.5 184 33.7
C06p01800 Brassica napus HOM05D004128 ORTHO05D008395 2.4e-19 100.5 184 33.2
Aa31LG1G6440 Aethionema arabicum HOM05D003554 ORTHO05D005130 9.1e-19 98.6 211 31.8
BcaC08g42812 Brassica carinata HOM05D008825 ORTHO05D013031 4.5e-18 96.3 233 31.3
Aa31sc454G20 Aethionema arabicum HOM05D003554 ORTHO05D005130 3.8e-17 93.2 141 40.4
C09p52720 Brassica napus HOM05D004128 ORTHO05D008395 8.5e-17 92.0 155 34.2
THA.LOC104803192 Tarenaya hassleriana HOM05D003554 ORTHO05D005130 8.5e-17 92.0 210 29.5
BcaB01g01318 Brassica carinata HOM05D004128 ORTHO05D008395 2.5e-16 90.5 128 43.0
BcaB07g32749 Brassica carinata HOM05D008316 ORTHO05D013031 3.2e-16 90.1 278 29.5
C03p49780 Brassica napus HOM05D004128 ORTHO05D008395 3.2e-16 90.1 155 33.5
Aa31LG10G9030 Aethionema arabicum HOM05D003554 ORTHO05D008395 4.2e-16 89.7 206 33.5
BcaC05g27750 Brassica carinata HOM05D008825 ORTHO05D013031 9.4e-16 88.6 202 33.2
THA.LOC109117170 Tarenaya hassleriana HOM05D003554 ORTHO05D005130 1.2e-15 88.2 207 30.0
BcaB01g01146 Brassica carinata HOM05D003554 ORTHO05D005130 3.6e-15 86.7 284 27.8
THA.LOC104811336 Tarenaya hassleriana HOM05D003554 ORTHO05D005130 8.0e-15 85.5 195 29.7
THA.LOC104807874 Tarenaya hassleriana HOM05D003554 ORTHO05D005130 1.8e-14 84.3 194 29.9
BcaB03g16118 Brassica carinata HOM05D003554 ORTHO05D005130 2.3e-14 84.0 141 36.9
BcaC01g01745 Brassica carinata HOM05D003554 ORTHO05D014926 2.3e-14 84.0 225 33.3
BcaB06g26193 Brassica carinata HOM05D003554 ORTHO05D014926 3.0e-14 83.6 195 35.9
AT2G06420 Arabidopsis thaliana HOM05D003554 ORTHO05D005130 4.0e-14 83.2 92 44.6
BNapus_Darmor_BZH_scaffold_167p00060 Brassica napus HOM05D003554 ORTHO05D005130 4.0e-14 83.2 90 48.9
Aa31sc538G10 Aethionema arabicum HOM05D003554 ORTHO05D008395 6.8e-14 82.4 146 37.0
C02p14940 Brassica napus HOM05D008316 ORTHO05D021631 8.8e-14 82.0 94 40.4
C01p27640 Brassica napus HOM05D004128 ORTHO05D008395 1.2e-13 81.6 199 29.6
BraA05t20993Z Brassica rapa HOM05D004128 ORTHO05D008395 1.2e-13 81.6 211 31.3
C05p06190 Brassica napus HOM05D003554 ORTHO05D005130 2.0e-13 80.9 90 47.8
CARHR049310 Cardamine hirsuta HOM05D003554 ORTHO05D005130 3.4e-13 80.1 72 51.4
Thhalv10000512m.g Eutrema salsugineum HOM05D003554 ORTHO05D005130 3.4e-13 80.1 82 47.6
THA.LOC109116427 Tarenaya hassleriana HOM05D003554 ORTHO05D005130 5.7e-13 79.3 206 30.6
C07p34800 Brassica napus HOM05D004128 ORTHO05D008395 2.2e-12 77.4 232 28.9
BolC6t38817H Brassica oleracea HOM05D004128 ORTHO05D013239 4.9e-12 76.3 192 29.7
BcaC01g02197 Brassica carinata HOM05D003554 ORTHO05D014926 1.1e-11 75.1 192 32.3
THA.LOC104799670 Tarenaya hassleriana HOM05D003554 ORTHO05D005130 1.4e-11 74.7 161 30.4
Carub.0005s0863 Capsella rubella HOM05D003554 ORTHO05D005130 1.8e-11 74.3 78 44.9
Sp7g02635 Schrenkiella parvula HOM05D003554 ORTHO05D005130 2.4e-11 73.9 48 64.6
Aa31sc318G10 Aethionema arabicum HOM05D028239 ORTHO05D005130 5.4e-11 72.8 103 37.9
THA.LOC104809668 Tarenaya hassleriana HOM05D003554 ORTHO05D005130 7.0e-11 72.4 211 30.8
BcaB08g35153 Brassica carinata HOM05D007984 ORTHO05D013027 1.2e-10 71.6 227 31.7
C01p25840 Brassica napus HOM05D004128 ORTHO05D008395 1.2e-10 71.6 232 28.4
C03p67190 Brassica napus HOM05D003554 ORTHO05D005130 2.0e-10 70.9 88 40.9
C04p39160 Brassica napus HOM05D004128 ORTHO05D008395 2.0e-10 70.9 132 33.3
C06p00220 Brassica napus HOM05D003554 ORTHO05D005130 2.0e-10 70.9 88 40.9
BolC5t32273H Brassica oleracea HOM05D003554 ORTHO05D005130 2.0e-10 70.9 88 40.9
BolC3t18729H Brassica oleracea HOM05D004128 ORTHO05D008395 3.5e-10 70.1 124 33.1
THA.LOC104807864 Tarenaya hassleriana HOM05D003554 ORTHO05D015748 5.9e-10 69.3 201 27.9
BcaC01g04710 Brassica carinata HOM05D008825 ORTHO05D013031 1.7e-09 67.8 197 29.9
C02p57980 Brassica napus HOM05D017905 ORTHO05D017243 1.7e-09 67.8 124 35.5
BolC4t27914H Brassica oleracea HOM05D008062 ORTHO05D008395 1.7e-09 67.8 91 37.4
BraA07t28446Z Brassica rapa HOM05D003554 ORTHO05D005130 3.8e-09 66.6 88 38.6
THA.LOC109116278 Tarenaya hassleriana HOM05D003554 ORTHO05D005130 8.6e-09 65.5 204 27.9
C08p21910 Brassica napus HOM05D004128 ORTHO05D008395 1.1e-08 65.1 191 29.8
Sp6g09630 Schrenkiella parvula HOM05D004128 ORTHO05D008395 1.1e-08 65.1 158 27.8
Aa31LG5G24000 Aethionema arabicum HOM05D003554 ORTHO05D005130 1.9e-08 64.3 57 50.9
BolC6t37871H Brassica oleracea HOM05D004128 ORTHO05D008395 1.9e-08 64.3 158 32.3
BraA08t33244Z Brassica rapa HOM05D004128 ORTHO05D008395 1.9e-08 64.3 158 32.3
BcaB03g16082 Brassica carinata HOM05D026233 ORTHO05D005130 2.5e-08 63.9 85 42.4
BcaC01g00316 Brassica carinata HOM05D003554 ORTHO05D014926 2.5e-08 63.9 191 31.4
A07p06510 Brassica napus HOM05D003554 ORTHO05D005130 2.5e-08 63.9 88 36.4
Aa31sc471G30 Aethionema arabicum HOM05D003554 ORTHO05D005130 5.6e-08 62.8 107 36.4
BcaB05g24479 Brassica carinata HOM05D008316 ORTHO05D017243 9.5e-08 62.0 196 30.1
BcaB07g33249 Brassica carinata HOM05D026233 ORTHO05D005130 9.5e-08 62.0 154 33.1
Oeu062254.1 Olea europaea HOM05D000700 ORTHO05D000397 9.5e-08 62.0 173 25.4
BcaC03g13667 Brassica carinata HOM05D007984 ORTHO05D039917 1.2e-07 61.6 192 32.3
C08p06800 Brassica napus HOM05D003554 ORTHO05D005130 1.2e-07 61.6 77 40.3
THA.LOC104798881 Tarenaya hassleriana HOM05D003554 ORTHO05D005130 1.6e-07 61.2 118 29.7
THA.LOC104800374 Tarenaya hassleriana HOM05D003554 ORTHO05D005130 1.6e-07 61.2 170 30.0
Aa31LG7G10730 Aethionema arabicum HOM05D003554 ORTHO05D008395 2.8e-07 60.5 142 34.5
THA.LOC104807807 Tarenaya hassleriana HOM05D003554 ORTHO05D005130 2.8e-07 60.5 123 28.5
Aa31LG9G11090 Aethionema arabicum HOM05D011111 ORTHO05D001112 3.6e-07 60.1 71 45.1
A02p27360 Brassica napus HOM05D011584 ORTHO05D016702 3.6e-07 60.1 90 50.0
BraA02t07764Z Brassica rapa HOM05D011584 ORTHO05D016702 3.6e-07 60.1 90 50.0
C03p60470 Brassica napus HOM05D004128 ORTHO05D008395 4.7e-07 59.7 197 29.4
BolC9t58724H Brassica oleracea HOM05D004128 ORTHO05D008395 4.7e-07 59.7 79 43.0
THA.LOC104820187 Tarenaya hassleriana HOM05D003554 ORTHO05D005130 4.7e-07 59.7 170 28.2
Aa31sc151G30 Aethionema arabicum HOM05D003554 ORTHO05D005130 6.1e-07 59.3 61 44.3
BcaB02g10972 Brassica carinata HOM05D003554 ORTHO05D014926 6.1e-07 59.3 157 31.2
BolC3t17148H Brassica oleracea HOM05D014471 ORTHO05D017646 6.1e-07 59.3 100 42.0
Oeu031011.1 Olea europaea HOM05D000700 ORTHO05D000397 6.1e-07 59.3 115 30.4
BolC2t09432H Brassica oleracea HOM05D004128 ORTHO05D008395 8.0e-07 58.9 191 28.8
BolC2t10066H Brassica oleracea HOM05D011584 ORTHO05D016702 8.0e-07 58.9 57 66.7
BcaB06g28000 Brassica carinata HOM05D009532 ORTHO05D005130 1.0e-06 58.5 59 45.8
C08p07220 Brassica napus HOM05D008316 ORTHO05D017243 1.0e-06 58.5 88 37.5
THA.LOC104821166 Tarenaya hassleriana HOM05D003554 ORTHO05D005130 1.0e-06 58.5 158 27.2
Aa31sc45G30 Aethionema arabicum HOM05D003554 ORTHO05D005130 1.4e-06 58.2 65 43.1
BolC4t23182H Brassica oleracea HOM05D003554 ORTHO05D005130 3.0e-06 57.0 51 54.9
MELO3C028279.2 Cucumis melo HOM05D007907 ORTHO05D009079 5.2e-06 56.2 94 35.1
C02p40540 Brassica napus HOM05D007984 ORTHO05D014515 6.8e-06 55.8 217 28.6
BcaB02g06748 Brassica carinata HOM05D008316 ORTHO05D005130 8.9e-06 55.5 148 33.1
BNapus_Darmor_BZH_scaffold_167p00050 Brassica napus HOM05D004128 ORTHO05D008395 8.9e-06 55.5 127 31.5


User provided reference genes

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