Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB01g01207 Brassica carinata HOM05D004128 ORTHO05D017536 4.8e-35 150.6 75 100.0
BcaB05g23656 Brassica carinata HOM05D004128 ORTHO05D008395 4.7e-30 134.0 75 90.7
BcaC02g10649 Brassica carinata HOM05D004128 ORTHO05D017536 1.0e-16 89.7 75 65.3
C04p26210 Brassica napus HOM05D004128 ORTHO05D017536 1.0e-16 89.7 75 65.3
BolC4t24185H Brassica oleracea HOM05D004128 ORTHO05D017536 1.0e-16 89.7 75 65.3
BcaC03g15146 Brassica carinata HOM05D004128 ORTHO05D008395 8.5e-16 86.7 75 65.3
BolC2t08771H Brassica oleracea HOM05D004128 ORTHO05D017536 8.5e-16 86.7 75 65.3
BcaB02g11375 Brassica carinata HOM05D007203 ORTHO05D011558 3.2e-15 84.7 87 51.7
BolC8t47837H Brassica oleracea HOM05D004128 ORTHO05D008395 3.6e-14 81.3 75 62.7
BcaC04g20966 Brassica carinata HOM05D006121 ORTHO05D009559 1.0e-13 79.7 73 61.6
C07p33860 Brassica napus HOM05D004128 ORTHO05D008395 1.0e-13 79.7 75 60.0
BcaC07g37515 Brassica carinata HOM05D004128 ORTHO05D008395 1.4e-13 79.3 75 61.3
BolC8t47741H Brassica oleracea HOM05D039310 ORTHO05D032948 5.2e-13 77.4 79 57.0
C08p08950 Brassica napus HOM05D039310 ORTHO05D032948 3.4e-12 74.7 79 55.7
BcaC07g37417 Brassica carinata HOM05D039310 ORTHO05D032948 4.4e-12 74.3 79 55.7
BcaB05g23062 Brassica carinata HOM05D004128 ORTHO05D092751 1.8e-10 68.9 102 43.1
BraA08t33243Z Brassica rapa HOM05D004128 ORTHO05D017536 3.1e-10 68.2 76 57.9
C04p37490 Brassica napus HOM05D037508 ORTHO05D031939 4.1e-10 67.8 80 46.2
BolC4t25316H Brassica oleracea HOM05D037508 ORTHO05D031939 1.6e-09 65.9 65 53.8
BcaC02g09707 Brassica carinata HOM05D037508 ORTHO05D031939 2.9e-08 61.6 80 43.8
BraA02t07693Z Brassica rapa HOM05D007203 ORTHO05D013810 5.0e-08 60.8 70 50.0
BcaB06g26429 Brassica carinata HOM05D007203 ORTHO05D011558 6.5e-08 60.5 92 40.2
A01p27690 Brassica napus HOM05D007203 ORTHO05D013810 6.5e-08 60.5 58 55.2
BcaB01g01643 Brassica carinata HOM05D007203 ORTHO05D011558 8.5e-08 60.1 66 51.5
BcaB03g16102 Brassica carinata HOM05D007203 ORTHO05D011558 8.5e-08 60.1 65 49.2
BcaB08g34543 Brassica carinata HOM05D007203 ORTHO05D011558 8.5e-08 60.1 92 40.2
A09p21540 Brassica napus HOM05D007203 ORTHO05D013810 8.5e-08 60.1 57 56.1
BraA09t37753Z Brassica rapa HOM05D007203 ORTHO05D013810 8.5e-08 60.1 57 56.1
BcaC09g49573 Brassica carinata HOM05D007203 ORTHO05D011558 1.1e-07 59.7 79 48.1
BcaNung01161 Brassica carinata HOM05D007203 ORTHO05D011558 1.1e-07 59.7 79 48.1
BcaC08g43405 Brassica carinata HOM05D007203 ORTHO05D094647 1.9e-07 58.9 57 54.4
C03p35500 Brassica napus HOM05D007203 ORTHO05D011558 1.9e-07 58.9 57 54.4
BcaB01g01921 Brassica carinata HOM05D007203 ORTHO05D011558 2.5e-07 58.5 79 48.1
BcaC01g00586 Brassica carinata HOM05D007203 ORTHO05D031716 2.5e-07 58.5 57 54.4
A01p25660 Brassica napus HOM05D007203 ORTHO05D013810 2.5e-07 58.5 57 54.4
C03p33440 Brassica napus HOM05D007203 ORTHO05D027708 2.5e-07 58.5 57 54.4
C06p26970 Brassica napus HOM05D007203 ORTHO05D020127 2.5e-07 58.5 57 54.4
C08p21920 Brassica napus HOM05D007203 ORTHO05D011558 2.5e-07 58.5 57 54.4
BolC2t09636H Brassica oleracea HOM05D007203 ORTHO05D013810 2.5e-07 58.5 57 54.4
BolC3t15665H Brassica oleracea HOM05D007203 ORTHO05D013810 2.5e-07 58.5 57 54.4
BolC3t17977H Brassica oleracea HOM05D007203 ORTHO05D011558 2.5e-07 58.5 57 54.4
BolC9t57189H Brassica oleracea HOM05D007203 ORTHO05D013810 2.5e-07 58.5 57 54.4
BcaB03g14937 Brassica carinata HOM05D007203 ORTHO05D011558 4.2e-07 57.8 66 50.0
C06p42690 Brassica napus HOM05D007203 ORTHO05D013810 4.2e-07 57.8 57 54.4
BolC8t49801H Brassica oleracea HOM05D007203 ORTHO05D013810 4.2e-07 57.8 58 53.4
BcaB03g16432 Brassica carinata HOM05D007203 ORTHO05D011558 5.5e-07 57.4 79 45.6
C06p11120 Brassica napus HOM05D007203 ORTHO05D027555 5.5e-07 57.4 57 56.1
BcaC05g27574 Brassica carinata HOM05D007203 ORTHO05D039927 7.2e-07 57.0 80 43.8
C01p16070 Brassica napus HOM05D007203 ORTHO05D011558 7.2e-07 57.0 57 52.6
C05p35590 Brassica napus HOM05D007203 ORTHO05D039927 7.2e-07 57.0 80 43.8
BraA05t21718Z Brassica rapa HOM05D007203 ORTHO05D011558 9.4e-07 56.6 58 55.2
BolC2t09431H Brassica oleracea HOM05D007203 ORTHO05D027708 1.2e-06 56.2 57 52.6
BcaC02g08829 Brassica carinata HOM05D007203 ORTHO05D027555 1.6e-06 55.8 72 50.0
BcaB01g01435 Brassica carinata HOM05D007203 ORTHO05D011558 4.7e-06 54.3 79 45.6
BcaB04g18412 Brassica carinata HOM05D007203 ORTHO05D011558 6.1e-06 53.9 54 55.6


User provided reference genes

Program Settings