Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB01g01136 Brassica carinata HOM05D000353 ORTHO05D013242 1.0e-45 186.4 97 100.0
BcaB03g16438 Brassica carinata HOM05D000353 ORTHO05D013242 1.6e-38 162.5 96 88.5
BcaB01g01538 Brassica carinata HOM05D011453 ORTHO05D014511 7.6e-33 143.7 85 88.2
BcaB05g23079 Brassica carinata HOM05D000353 ORTHO05D013242 4.2e-31 137.9 81 90.1
BcaNung05687 Brassica carinata HOM05D000353 ORTHO05D013242 1.6e-30 136.0 79 91.1
BcaB06g26938 Brassica carinata HOM05D000353 ORTHO05D013242 1.8e-29 132.5 78 89.7
BcaB02g11474 Brassica carinata HOM05D000589 ORTHO05D013242 9.6e-28 126.7 75 90.7
BcaB04g18091 Brassica carinata HOM05D000353 ORTHO05D013242 3.7e-27 124.8 78 82.1
BcaB05g23573 Brassica carinata HOM05D000589 ORTHO05D013242 1.1e-26 123.2 75 88.0
C09p21140 Brassica napus HOM05D000353 ORTHO05D013242 4.3e-20 101.3 96 58.3
BcaB06g26120 Brassica carinata HOM05D000353 ORTHO05D013242 7.4e-20 100.5 66 78.8
BolC9t55015H Brassica oleracea HOM05D000353 ORTHO05D013242 1.6e-19 99.4 96 57.3
BcaB08g35927 Brassica carinata HOM05D025466 ORTHO05D013242 6.2e-19 97.4 59 84.7
BcaB01g02433 Brassica carinata HOM05D005426 ORTHO05D012988 4.2e-15 84.7 57 75.4
BcaB06g26826 Brassica carinata HOM05D000589 ORTHO05D013242 2.7e-14 82.0 46 93.5
BolC5t32503H Brassica oleracea HOM05D000353 ORTHO05D042563 4.6e-14 81.3 73 56.2
C05p37620 Brassica napus HOM05D000353 ORTHO05D042563 1.3e-13 79.7 73 54.8
BolC8t48493H Brassica oleracea HOM05D000353 ORTHO05D011975 3.9e-13 78.2 96 44.8
C02p27140 Brassica napus HOM05D000353 ORTHO05D000174 5.1e-13 77.8 97 45.4
C05p35890 Brassica napus HOM05D000353 ORTHO05D011975 6.7e-13 77.4 96 44.8
C09p23340 Brassica napus HOM05D000353 ORTHO05D011975 6.7e-13 77.4 96 44.8
BolC5t34016H Brassica oleracea HOM05D000353 ORTHO05D011975 6.7e-13 77.4 96 44.8
A02p28650 Brassica napus HOM05D000353 ORTHO05D011975 1.1e-12 76.6 96 44.8
C05p53380 Brassica napus HOM05D000353 ORTHO05D011975 1.1e-12 76.6 86 46.5
C09p64190 Brassica napus HOM05D000353 ORTHO05D011975 1.1e-12 76.6 96 45.8
BolC5t34008H Brassica oleracea HOM05D000353 ORTHO05D011975 1.1e-12 76.6 96 43.8
BolC9t59256H Brassica oleracea HOM05D000353 ORTHO05D011975 1.1e-12 76.6 96 45.8
BraA02t07900Z Brassica rapa HOM05D000353 ORTHO05D011975 1.1e-12 76.6 96 44.8
A07p09370 Brassica napus HOM05D025466 ORTHO05D013242 2.5e-12 75.5 72 61.1
BraA07t28733Z Brassica rapa HOM05D025466 ORTHO05D013242 2.5e-12 75.5 72 61.1
A01p27050 Brassica napus HOM05D000353 ORTHO05D011975 3.3e-12 75.1 86 46.5
BraA01t02839Z Brassica rapa HOM05D000353 ORTHO05D011975 3.3e-12 75.1 86 46.5
C02p27620 Brassica napus HOM05D000353 ORTHO05D005681 5.7e-12 74.3 85 45.9
BolC9t57769H Brassica oleracea HOM05D000353 ORTHO05D011975 5.7e-12 74.3 96 43.8
BcaB06g26774 Brassica carinata HOM05D000353 ORTHO05D092330 7.4e-12 73.9 46 87.0
BolC5t31839H Brassica oleracea HOM05D000353 ORTHO05D011975 1.3e-11 73.2 96 43.8
C02p47690 Brassica napus HOM05D000353 ORTHO05D011975 2.2e-11 72.4 96 42.7
BolC2t10806H Brassica oleracea HOM05D000353 ORTHO05D011975 2.2e-11 72.4 96 42.7
BcaC05g27602 Brassica carinata HOM05D000353 ORTHO05D012074 3.7e-11 71.6 86 41.9
C05p35880 Brassica napus HOM05D000353 ORTHO05D005681 3.7e-11 71.6 86 41.9
BolC2t09049H Brassica oleracea HOM05D000353 ORTHO05D012074 3.7e-11 71.6 86 43.0
BcaC03g15824 Brassica carinata HOM05D000353 ORTHO05D000174 6.3e-11 70.9 86 41.9
A02p28660 Brassica napus HOM05D000353 ORTHO05D012074 6.3e-11 70.9 86 41.9
BolC4t26685H Brassica oleracea HOM05D000353 ORTHO05D012074 6.3e-11 70.9 86 41.9
BolC5t32307H Brassica oleracea HOM05D000353 ORTHO05D012074 6.3e-11 70.9 86 41.9
BolC5t34001H Brassica oleracea HOM05D000353 ORTHO05D012074 6.3e-11 70.9 86 41.9
BolC8t48492H Brassica oleracea HOM05D000353 ORTHO05D012074 6.3e-11 70.9 86 41.9
BraA02t07901Z Brassica rapa HOM05D000353 ORTHO05D012074 6.3e-11 70.9 86 41.9
BolC8t47318H Brassica oleracea HOM05D000353 ORTHO05D011975 8.2e-11 70.5 95 44.2
BcaC03g15183 Brassica carinata HOM05D000353 ORTHO05D000174 1.1e-10 70.1 90 44.4
C07p19100 Brassica napus HOM05D000353 ORTHO05D012074 1.4e-10 69.7 86 41.9
BcaC06g36012 Brassica carinata HOM05D000353 ORTHO05D012074 1.8e-10 69.3 86 40.7
C02p27630 Brassica napus HOM05D000353 ORTHO05D012074 1.8e-10 69.3 86 40.7
BcaC04g22103 Brassica carinata HOM05D000353 ORTHO05D012074 4.1e-10 68.2 86 39.5
C09p23330 Brassica napus HOM05D000353 ORTHO05D012074 4.1e-10 68.2 86 39.5
C09p49190 Brassica napus HOM05D000353 ORTHO05D005681 4.1e-10 68.2 92 39.1
BolC5t34015H Brassica oleracea HOM05D000353 ORTHO05D012074 4.1e-10 68.2 86 40.7
BolC9t55251H Brassica oleracea HOM05D000353 ORTHO05D012074 4.1e-10 68.2 86 39.5
BcaC06g33696 Brassica carinata HOM05D000353 ORTHO05D012074 5.3e-10 67.8 86 40.7
BcaC06g35171 Brassica carinata HOM05D000353 ORTHO05D012074 5.3e-10 67.8 86 40.7
A01p27040 Brassica napus HOM05D000353 ORTHO05D012074 5.3e-10 67.8 86 41.9
A05p21300 Brassica napus HOM05D000353 ORTHO05D012074 5.3e-10 67.8 86 40.7
C02p47700 Brassica napus HOM05D000353 ORTHO05D012074 5.3e-10 67.8 86 40.7
BolC7t42421H Brassica oleracea HOM05D000353 ORTHO05D012074 5.3e-10 67.8 86 40.7
BraA01t02838Z Brassica rapa HOM05D000353 ORTHO05D012074 5.3e-10 67.8 86 41.9
BraA05t21038Z Brassica rapa HOM05D000353 ORTHO05D012074 5.3e-10 67.8 86 40.7
BolC9t57768H Brassica oleracea HOM05D000353 ORTHO05D012074 6.9e-10 67.4 80 42.5
BcaB04g17266 Brassica carinata HOM05D000353 ORTHO05D005681 9.0e-10 67.0 86 39.5
BcaB04g18044 Brassica carinata HOM05D000353 ORTHO05D005681 9.0e-10 67.0 86 39.5
BcaB03g15977 Brassica carinata HOM05D000353 ORTHO05D005681 1.2e-09 66.6 86 38.4
BcaB04g18092 Brassica carinata HOM05D000353 ORTHO05D013242 1.2e-09 66.6 70 52.9
BcaB08g34856 Brassica carinata HOM05D000353 ORTHO05D005681 1.5e-09 66.2 86 38.4
BcaB01g01095 Brassica carinata HOM05D000353 ORTHO05D005681 3.4e-09 65.1 79 41.8
BcaB08g34640 Brassica carinata HOM05D000353 ORTHO05D005681 3.4e-09 65.1 86 37.2
C05p53350 Brassica napus HOM05D000353 ORTHO05D005681 5.9e-09 64.3 76 44.7
BcaB01g00737 Brassica carinata HOM05D009963 ORTHO05D013780 7.6e-09 63.9 34 88.2
BcaC07g37502 Brassica carinata HOM05D000353 ORTHO05D039805 1.0e-08 63.5 89 40.4
C03p63080 Brassica napus HOM05D000353 ORTHO05D005681 1.0e-08 63.5 85 40.0
BolC8t47825H Brassica oleracea HOM05D000353 ORTHO05D039805 1.0e-08 63.5 89 40.4
BcaB02g10509 Brassica carinata HOM05D000353 ORTHO05D005681 1.7e-08 62.8 86 39.5
C03p63090 Brassica napus HOM05D000353 ORTHO05D011975 2.2e-08 62.4 79 45.6
C05p37600 Brassica napus HOM05D000353 ORTHO05D040703 3.8e-08 61.6 52 61.5
BcaB03g16214 Brassica carinata HOM05D000353 ORTHO05D005681 5.0e-08 61.2 87 42.5
BcaB07g32709 Brassica carinata HOM05D000353 ORTHO05D005681 5.0e-08 61.2 74 40.5
BolC7t41941H Brassica oleracea HOM05D025466 ORTHO05D013242 5.0e-08 61.2 62 56.5
C07p14430 Brassica napus HOM05D025466 ORTHO05D013242 8.5e-08 60.5 62 56.5
BcaB01g00780 Brassica carinata HOM05D000353 ORTHO05D011975 1.1e-07 60.1 90 41.1
C09p17510 Brassica napus HOM05D000353 ORTHO05D011975 2.5e-07 58.9 79 44.3
C02p27150 Brassica napus HOM05D000353 ORTHO05D012074 7.2e-07 57.4 76 39.5
BcaB02g11477 Brassica carinata HOM05D000353 ORTHO05D005681 9.3e-07 57.0 86 34.9
BcaB01g01176 Brassica carinata HOM05D000353 ORTHO05D092964 1.2e-06 56.6 52 51.9
BolC5t32308H Brassica oleracea HOM05D000353 ORTHO05D011975 1.2e-06 56.6 55 47.3
BcaB06g27200 Brassica carinata HOM05D000353 ORTHO05D005681 2.7e-06 55.5 86 34.9
BolC5t32499H Brassica oleracea HOM05D000353 ORTHO05D040703 2.7e-06 55.5 44 63.6
BcaB08g35405 Brassica carinata HOM05D000353 ORTHO05D023971 4.6e-06 54.7 91 33.0
C02p55690 Brassica napus HOM05D000353 ORTHO05D005681 4.6e-06 54.7 94 34.0


User provided reference genes

Program Settings