Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB01g01127 Brassica carinata HOM05D006289 ORTHO05D017564 1.0e-72 276.6 135 100.0
BcaB04g19296 Brassica carinata HOM05D006289 ORTHO05D017564 1.4e-56 223.0 134 77.6
BcaB04g19628 Brassica carinata HOM05D005627 ORTHO05D017564 2.2e-38 162.5 133 51.9
BcaB03g16259 Brassica carinata HOM05D005627 ORTHO05D021730 2.1e-36 156.0 132 53.0
A09p28380 Brassica napus HOM05D005627 ORTHO05D021730 6.0e-36 154.5 133 52.6
BraA05t20012Z Brassica rapa HOM05D005627 ORTHO05D021730 3.0e-35 152.1 132 53.0
BcaB08g34566 Brassica carinata HOM05D005627 ORTHO05D009842 1.9e-34 149.4 132 53.0
BcaC04g19885 Brassica carinata HOM05D005627 ORTHO05D017564 3.3e-34 148.7 132 50.8
BcaB01g00118 Brassica carinata HOM05D005627 ORTHO05D009842 7.3e-34 147.5 132 50.8
BcaB01g01914 Brassica carinata HOM05D005627 ORTHO05D009842 7.3e-34 147.5 133 50.4
A03p68400 Brassica napus HOM05D005627 ORTHO05D017564 3.6e-33 145.2 133 51.1
BcaB05g23251 Brassica carinata HOM05D005627 ORTHO05D009842 1.1e-32 143.7 133 53.4
BcaC05g27033 Brassica carinata HOM05D005627 ORTHO05D031886 6.9e-32 141.0 132 50.0
C05p28910 Brassica napus HOM05D005627 ORTHO05D031886 6.9e-32 141.0 132 50.0
BolC5t31612H Brassica oleracea HOM05D005627 ORTHO05D031886 6.9e-32 141.0 132 50.0
BraA01t02617Z Brassica rapa HOM05D005627 ORTHO05D017564 1.2e-31 140.2 133 49.6
BcaC08g46979 Brassica carinata HOM05D005627 ORTHO05D019933 3.4e-31 138.7 133 48.1
BNapus_Darmor_BZH_scaffold_103p00100 Brassica napus HOM05D005627 ORTHO05D017564 4.4e-31 138.3 133 49.6
BNapus_Darmor_BZH_scaffold_104p00110 Brassica napus HOM05D005627 ORTHO05D017564 4.4e-31 138.3 133 49.6
BraSC36t46108Z Brassica rapa HOM05D005627 ORTHO05D017564 4.4e-31 138.3 133 49.6
BcaC08g47004 Brassica carinata HOM05D005627 ORTHO05D019933 1.9e-29 132.9 133 45.1
A04p11360 Brassica napus HOM05D005627 ORTHO05D019933 1.2e-28 130.2 133 45.9
BraA04t16798Z Brassica rapa HOM05D005627 ORTHO05D019933 1.2e-28 130.2 133 45.9
BraA02t08906Z Brassica rapa HOM05D005627 ORTHO05D019933 1.6e-28 129.8 133 45.1
BcaB07g30175 Brassica carinata HOM05D005627 ORTHO05D019933 2.3e-27 125.9 132 43.9
A09p34760 Brassica napus HOM05D006289 ORTHO05D009842 4.8e-25 118.2 132 41.7
C09p39670 Brassica napus HOM05D005627 ORTHO05D021730 6.2e-25 117.9 115 46.1
BolC9t56847H Brassica oleracea HOM05D005627 ORTHO05D021730 6.2e-25 117.9 115 46.1
A01p23190 Brassica napus HOM05D006289 ORTHO05D033772 1.8e-24 116.3 132 41.7
BraA01t02228Z Brassica rapa HOM05D006289 ORTHO05D033772 1.8e-24 116.3 132 41.7
BraA07t28814Z Brassica rapa HOM05D006289 ORTHO05D009842 2.4e-24 115.9 133 42.1
A01p24510 Brassica napus HOM05D006289 ORTHO05D016037 5.3e-24 114.8 133 39.1
BraA03t09393Z Brassica rapa HOM05D006289 ORTHO05D016037 6.9e-24 114.4 133 38.3
BcaB06g28130 Brassica carinata HOM05D006289 ORTHO05D016037 9.0e-24 114.0 133 37.6
C02p52110 Brassica napus HOM05D005627 ORTHO05D040212 9.0e-24 114.0 131 42.0
BolC2t11295H Brassica oleracea HOM05D005627 ORTHO05D040212 9.0e-24 114.0 131 42.0
BolC8t48148H Brassica oleracea HOM05D006289 ORTHO05D033772 1.5e-23 113.2 132 40.2
BcaB08g34781 Brassica carinata HOM05D005627 ORTHO05D009842 4.5e-23 111.7 95 47.4
BraA04t16495Z Brassica rapa HOM05D006289 ORTHO05D016037 7.6e-23 110.9 133 38.3
A05p20430 Brassica napus HOM05D006289 ORTHO05D009842 1.3e-22 110.2 132 39.4
BcaB01g00831 Brassica carinata HOM05D005627 ORTHO05D009842 1.7e-22 109.8 133 39.1
A02p27270 Brassica napus HOM05D006289 ORTHO05D040814 4.9e-22 108.2 132 37.9
BraA02t07752Z Brassica rapa HOM05D006289 ORTHO05D040814 4.9e-22 108.2 132 37.9
BcaB02g10844 Brassica carinata HOM05D006289 ORTHO05D016037 6.4e-22 107.8 132 38.6
BolC2t11294H Brassica oleracea HOM05D006289 ORTHO05D002086 6.4e-22 107.8 100 54.0
BcaC04g21092 Brassica carinata HOM05D005627 ORTHO05D031749 1.9e-21 106.3 90 53.3
C09p35790 Brassica napus HOM05D005627 ORTHO05D031749 1.9e-21 106.3 90 53.3
BolC3t18952H Brassica oleracea HOM05D006289 ORTHO05D017568 1.9e-21 106.3 132 40.9
BolC7t42041H Brassica oleracea HOM05D006289 ORTHO05D016037 1.9e-21 106.3 133 36.8
BolC9t56413H Brassica oleracea HOM05D005627 ORTHO05D031749 1.9e-21 106.3 90 53.3
BcaC06g35485 Brassica carinata HOM05D006289 ORTHO05D016037 2.4e-21 105.9 133 36.8
A07p02750 Brassica napus HOM05D006289 ORTHO05D009842 3.2e-21 105.5 132 36.4
C07p21860 Brassica napus HOM05D006289 ORTHO05D009842 3.2e-21 105.5 132 39.4
BraA06t25337Z Brassica rapa HOM05D006289 ORTHO05D009842 4.2e-21 105.1 132 36.4
A02p12540 Brassica napus HOM05D006289 ORTHO05D009842 5.4e-21 104.8 132 38.6
BraA10t43450Z Brassica rapa HOM05D006289 ORTHO05D009842 5.4e-21 104.8 132 38.6
BraA07t28776Z Brassica rapa HOM05D005627 ORTHO05D017568 9.3e-21 104.0 132 40.9
C09p65560 Brassica napus HOM05D006289 ORTHO05D017568 2.1e-20 102.8 131 40.5
BraA05t21307Z Brassica rapa HOM05D006289 ORTHO05D009842 2.1e-20 102.8 132 37.9
BolC9t59378H Brassica oleracea HOM05D006289 ORTHO05D017568 2.7e-20 102.4 132 40.2
BcaC04g19240 Brassica carinata HOM05D006289 ORTHO05D017568 3.5e-20 102.1 132 38.6
C07p15540 Brassica napus HOM05D006289 ORTHO05D016037 3.5e-20 102.1 133 35.3
A05p27900 Brassica napus HOM05D006289 ORTHO05D009842 4.6e-20 101.7 132 35.6
C01p43410 Brassica napus HOM05D006289 ORTHO05D017568 4.6e-20 101.7 132 39.4
A05p23770 Brassica napus HOM05D006289 ORTHO05D042070 1.3e-19 100.1 132 37.1
BraA05t21247Z Brassica rapa HOM05D006289 ORTHO05D042070 1.3e-19 100.1 132 37.1
A09p28360 Brassica napus HOM05D006289 ORTHO05D027118 1.8e-19 99.8 132 34.1
C02p45490 Brassica napus HOM05D006289 ORTHO05D039115 2.3e-19 99.4 132 37.9
A05p28230 Brassica napus HOM05D006289 ORTHO05D009842 3.9e-19 98.6 132 37.1
C03p66840 Brassica napus HOM05D006289 ORTHO05D017568 3.9e-19 98.6 132 39.4
BraA05t21704Z Brassica rapa HOM05D006289 ORTHO05D009842 3.9e-19 98.6 132 37.1
BcaB03g16579 Brassica carinata HOM05D006289 ORTHO05D019933 1.1e-18 97.1 133 37.6
BcaNung00230 Brassica carinata HOM05D006289 ORTHO05D027553 1.9e-18 96.3 133 36.1
BcaC02g11662 Brassica carinata HOM05D005627 ORTHO05D011792 3.3e-18 95.5 132 31.1
C03p74240 Brassica napus HOM05D006289 ORTHO05D028190 3.3e-18 95.5 132 33.3
C04p12610 Brassica napus HOM05D005627 ORTHO05D011792 3.3e-18 95.5 132 31.1
BolC3t19682H Brassica oleracea HOM05D006289 ORTHO05D028190 3.3e-18 95.5 132 33.3
BraA05t20010Z Brassica rapa HOM05D006289 ORTHO05D028190 3.3e-18 95.5 132 33.3
A09p06670 Brassica napus HOM05D006289 ORTHO05D009842 4.3e-18 95.1 117 38.5
BcaC05g27035 Brassica carinata HOM05D006289 ORTHO05D032057 7.4e-18 94.4 132 36.4
C05p28920 Brassica napus HOM05D006289 ORTHO05D032057 7.4e-18 94.4 132 36.4
BolC5t31614H Brassica oleracea HOM05D006289 ORTHO05D032057 7.4e-18 94.4 132 36.4
BolC7t41624H Brassica oleracea HOM05D006289 ORTHO05D027553 1.3e-17 93.6 132 36.4
BraA10t42593Z Brassica rapa HOM05D006289 ORTHO05D009842 1.3e-17 93.6 118 39.8
BcaB04g18536 Brassica carinata HOM05D005627 ORTHO05D009842 2.8e-17 92.4 132 36.4
C01p21290 Brassica napus HOM05D006289 ORTHO05D009842 2.8e-17 92.4 126 34.9
BcaB05g23054 Brassica carinata HOM05D005627 ORTHO05D011792 1.8e-16 89.7 132 31.1
BolC9t58939H Brassica oleracea HOM05D008838 ORTHO05D011792 5.3e-16 88.2 132 34.1
C06p38200 Brassica napus HOM05D005627 ORTHO05D011976 6.9e-16 87.8 129 31.8
A05p27890 Brassica napus HOM05D005627 ORTHO05D028293 2.0e-15 86.3 130 34.6
BolC7t41413H Brassica oleracea HOM05D005627 ORTHO05D011976 2.6e-15 85.9 128 30.5
BraA02t06823Z Brassica rapa HOM05D005627 ORTHO05D011792 3.4e-15 85.5 132 31.1
BraA09t41982Z Brassica rapa HOM05D005627 ORTHO05D011792 3.4e-15 85.5 132 31.1
C07p12150 Brassica napus HOM05D005627 ORTHO05D011976 4.5e-15 85.1 129 29.5
A03p31870 Brassica napus HOM05D005627 ORTHO05D027884 5.8e-15 84.7 128 31.2
A03p51090 Brassica napus HOM05D008838 ORTHO05D039997 5.8e-15 84.7 128 31.2
BraA01t02126Z Brassica rapa HOM05D005627 ORTHO05D021730 5.8e-15 84.7 72 51.4
BcaC08g44143 Brassica carinata HOM05D008838 ORTHO05D011792 7.6e-15 84.3 132 30.3
BolC8t49548H Brassica oleracea HOM05D008838 ORTHO05D011792 7.6e-15 84.3 132 31.1
BraA06t24543Z Brassica rapa HOM05D005627 ORTHO05D027884 1.3e-14 83.6 128 31.2
A07p02760 Brassica napus HOM05D005627 ORTHO05D028293 2.2e-14 82.8 128 34.4
A07p31520 Brassica napus HOM05D008838 ORTHO05D028150 2.2e-14 82.8 132 31.1
A10p17400 Brassica napus HOM05D008838 ORTHO05D028150 2.2e-14 82.8 132 31.1
BolC7t41682H Brassica oleracea HOM05D005627 ORTHO05D011976 2.9e-14 82.4 129 28.7
C07p12180 Brassica napus HOM05D005627 ORTHO05D011976 3.8e-14 82.0 129 30.2
BraA02t08907Z Brassica rapa HOM05D001038 ORTHO05D000395 3.8e-14 82.0 132 31.8
BcaB04g18139 Brassica carinata HOM05D006289 ORTHO05D009842 4.9e-14 81.6 123 30.9
BraSC36t46060Z Brassica rapa HOM05D005627 ORTHO05D042212 4.9e-14 81.6 123 33.3
BcaB05g24894 Brassica carinata HOM05D008384 ORTHO05D009842 6.4e-14 81.3 117 35.0
C05p48960 Brassica napus HOM05D008838 ORTHO05D017578 8.4e-14 80.9 132 30.3
BolC4t22910H Brassica oleracea HOM05D005627 ORTHO05D011792 8.4e-14 80.9 132 28.8
BcaB05g23461 Brassica carinata HOM05D009418 ORTHO05D011792 1.1e-13 80.5 132 32.6
C05p37190 Brassica napus HOM05D005627 ORTHO05D024275 1.1e-13 80.5 60 53.3
BcaC05g27687 Brassica carinata HOM05D005627 ORTHO05D021837 1.4e-13 80.1 132 30.3
C05p36670 Brassica napus HOM05D008838 ORTHO05D017578 1.4e-13 80.1 132 30.3
C09p30140 Brassica napus HOM05D005627 ORTHO05D042654 1.4e-13 80.1 119 30.3
BolC2t07876H Brassica oleracea HOM05D008384 ORTHO05D009842 1.4e-13 80.1 116 35.3
BcaC06g36127 Brassica carinata HOM05D013280 ORTHO05D011792 1.9e-13 79.7 132 28.0
A05p13630 Brassica napus HOM05D006289 ORTHO05D027692 2.4e-13 79.3 133 34.6
BcaC05g27031 Brassica carinata HOM05D005627 ORTHO05D095450 3.2e-13 79.0 115 38.3
C07p34790 Brassica napus HOM05D008838 ORTHO05D028150 4.2e-13 78.6 132 31.1
C01p40360 Brassica napus HOM05D008384 ORTHO05D009842 5.5e-13 78.2 128 30.5
BolC7t41685H Brassica oleracea HOM05D005627 ORTHO05D011976 5.5e-13 78.2 129 30.2
BcaB05g22096 Brassica carinata HOM05D009418 ORTHO05D011792 7.1e-13 77.8 132 31.1
C07p12160 Brassica napus HOM05D005627 ORTHO05D013519 7.1e-13 77.8 128 29.7
BcaB02g10993 Brassica carinata HOM05D005627 ORTHO05D013519 9.3e-13 77.4 123 30.9
BolC7t44007H Brassica oleracea HOM05D005627 ORTHO05D028150 9.3e-13 77.4 136 30.9
BcaC02g07853 Brassica carinata HOM05D009418 ORTHO05D002311 1.2e-12 77.0 132 31.1
BcaC01g03623 Brassica carinata HOM05D009418 ORTHO05D018626 1.6e-12 76.6 132 31.1
BraA07t28074Z Brassica rapa HOM05D006289 ORTHO05D009842 1.6e-12 76.6 77 40.3
BcaB07g31665 Brassica carinata HOM05D008384 ORTHO05D009842 2.1e-12 76.3 116 32.8
BcaC05g24337 Brassica carinata HOM05D009418 ORTHO05D011792 2.1e-12 76.3 132 30.3
A10p07450 Brassica napus HOM05D006289 ORTHO05D009842 2.1e-12 76.3 108 36.1
C04p40320 Brassica napus HOM05D009418 ORTHO05D018626 2.1e-12 76.3 127 31.5
BcaB01g04195 Brassica carinata HOM05D009418 ORTHO05D018626 2.7e-12 75.9 132 30.3
BcaC08g45148 Brassica carinata HOM05D008384 ORTHO05D009842 2.7e-12 75.9 116 33.6
C01p11540 Brassica napus HOM05D005627 ORTHO05D009842 2.7e-12 75.9 61 49.2
C07p35890 Brassica napus HOM05D008384 ORTHO05D016044 3.5e-12 75.5 116 34.5
BraA04t18196Z Brassica rapa HOM05D005627 ORTHO05D027884 3.5e-12 75.5 119 31.1
BraA04t18509Z Brassica rapa HOM05D005627 ORTHO05D021837 4.6e-12 75.1 133 31.6
A04p11380 Brassica napus HOM05D001038 ORTHO05D000395 6.0e-12 74.7 132 29.5
C02p52100 Brassica napus HOM05D007462 ORTHO05D002086 6.0e-12 74.7 71 54.9
BcaB01g01859 Brassica carinata HOM05D005627 ORTHO05D013519 7.9e-12 74.3 121 33.9
C07p09750 Brassica napus HOM05D005627 ORTHO05D011976 2.3e-11 72.8 94 33.0
C09p12390 Brassica napus HOM05D005627 ORTHO05D032198 2.3e-11 72.8 87 39.1
BraA05t20302Z Brassica rapa HOM05D006289 ORTHO05D027692 2.3e-11 72.8 133 31.6
BcaB03g15637 Brassica carinata HOM05D009418 ORTHO05D027366 3.9e-11 72.0 132 28.8
C06p00830 Brassica napus HOM05D008384 ORTHO05D009842 5.1e-11 71.6 128 31.2
A01p23200 Brassica napus HOM05D001038 ORTHO05D000395 6.7e-11 71.2 128 28.1
BraA01t02229Z Brassica rapa HOM05D005627 ORTHO05D013519 6.7e-11 71.2 128 28.1
BolC7t41649H Brassica oleracea HOM05D005627 ORTHO05D027884 1.5e-10 70.1 132 28.0
BcaC05g27915 Brassica carinata HOM05D005627 ORTHO05D011792 1.9e-10 69.7 132 25.8
BcaB04g19900 Brassica carinata HOM05D009418 ORTHO05D011792 2.5e-10 69.3 124 30.6
BcaNung05731 Brassica carinata HOM05D005627 ORTHO05D011976 2.5e-10 69.3 70 42.9
BcaC05g27914 Brassica carinata HOM05D005627 ORTHO05D011792 5.6e-10 68.2 132 25.0
BcaB01g01613 Brassica carinata HOM05D006289 ORTHO05D009842 7.4e-10 67.8 80 37.5
BcaB03g14887 Brassica carinata HOM05D008384 ORTHO05D009842 9.6e-10 67.4 121 29.8
BcaB02g10994 Brassica carinata HOM05D005627 ORTHO05D011976 1.3e-09 67.0 70 38.6
BcaB06g27189 Brassica carinata HOM05D066470 ORTHO05D009842 1.3e-09 67.0 125 32.8
BraA04t16800Z Brassica rapa HOM05D001038 ORTHO05D000395 1.3e-09 67.0 132 29.5
BraA04t16529Z Brassica rapa HOM05D015892 ORTHO05D009842 1.6e-09 66.6 128 30.5
BcaC03g16702 Brassica carinata HOM05D006289 ORTHO05D039115 2.1e-09 66.2 102 34.3
BcaC08g44443 Brassica carinata HOM05D008838 ORTHO05D017578 2.1e-09 66.2 100 30.0
C09p39660 Brassica napus HOM05D006289 ORTHO05D027118 2.1e-09 66.2 133 25.6
BcaC09g49023 Brassica carinata HOM05D006289 ORTHO05D018698 2.8e-09 65.9 52 48.1
C06p18890 Brassica napus HOM05D008838 ORTHO05D017578 2.8e-09 65.9 86 32.6
BolC9t56845H Brassica oleracea HOM05D006289 ORTHO05D027118 2.8e-09 65.9 133 24.8
A06p22330 Brassica napus HOM05D005627 ORTHO05D011976 3.7e-09 65.5 128 28.9
BraA06t25653Z Brassica rapa HOM05D005627 ORTHO05D013519 3.7e-09 65.5 85 38.8
BcaB03g14785 Brassica carinata HOM05D006289 ORTHO05D009842 4.8e-09 65.1 100 35.0
BolC5t30494H Brassica oleracea HOM05D006289 ORTHO05D009842 4.8e-09 65.1 101 31.7
BcaC04g20562 Brassica carinata HOM05D006289 ORTHO05D016037 6.2e-09 64.7 95 30.5
BcaC03g17142 Brassica carinata HOM05D005627 ORTHO05D011976 8.2e-09 64.3 70 35.7
BolC2t10222H Brassica oleracea HOM05D008384 ORTHO05D009842 8.2e-09 64.3 121 32.2
BolC2t11140H Brassica oleracea HOM05D005627 ORTHO05D011976 8.2e-09 64.3 70 35.7
BcaB01g01529 Brassica carinata HOM05D008384 ORTHO05D009842 1.4e-08 63.5 116 30.2
BcaC06g35917 Brassica carinata HOM05D005627 ORTHO05D011976 1.4e-08 63.5 70 35.7
BraA06t25336Z Brassica rapa HOM05D001038 ORTHO05D028293 1.8e-08 63.2 71 40.8
C03p24860 Brassica napus HOM05D008384 ORTHO05D009842 2.4e-08 62.8 121 25.6
C09p37890 Brassica napus HOM05D013280 ORTHO05D011792 2.4e-08 62.8 106 28.3
BraA10t43452Z Brassica rapa HOM05D001038 ORTHO05D019929 2.4e-08 62.8 89 36.0
BraA07t28076Z Brassica rapa HOM05D001038 ORTHO05D028293 3.1e-08 62.4 71 40.8
Sp4g09860 Schrenkiella parvula HOM05D005627 ORTHO05D011792 3.1e-08 62.4 111 32.4
BolC8t47418H Brassica oleracea HOM05D005627 ORTHO05D042654 4.0e-08 62.0 129 27.9
BcaC06g35675 Brassica carinata HOM05D005627 ORTHO05D011976 5.3e-08 61.6 70 37.1
BcaC07g37194 Brassica carinata HOM05D005627 ORTHO05D011976 5.3e-08 61.6 70 35.7
BraA06t25319Z Brassica rapa HOM05D005627 ORTHO05D011976 5.3e-08 61.6 128 27.3
BcaB04g17888 Brassica carinata HOM05D005627 ORTHO05D017568 1.2e-07 60.5 72 34.7
BolC9t55879H Brassica oleracea HOM05D005627 ORTHO05D009842 1.2e-07 60.5 65 35.4
C02p24040 Brassica napus HOM05D006289 ORTHO05D009842 2.6e-07 59.3 59 44.1
BolC7t41062H Brassica oleracea HOM05D008384 ORTHO05D009842 2.6e-07 59.3 99 31.3
BcaC01g03468 Brassica carinata HOM05D008384 ORTHO05D009842 3.4e-07 58.9 113 30.1
BcaB05g23720 Brassica carinata HOM05D008384 ORTHO05D009842 7.6e-07 57.8 97 26.8
C08p09320 Brassica napus HOM05D006289 ORTHO05D017568 1.3e-06 57.0 50 48.0
C03p31500 Brassica napus HOM05D015892 ORTHO05D009842 1.7e-06 56.6 128 27.3
BcaB01g01826 Brassica carinata HOM05D009418 ORTHO05D092826 3.8e-06 55.5 132 28.0
C05p37180 Brassica napus HOM05D006289 ORTHO05D103915 3.8e-06 55.5 52 51.9
BcaC09g49041 Brassica carinata HOM05D006289 ORTHO05D032439 6.5e-06 54.7 59 40.7
BolC2t10570H Brassica oleracea HOM05D006289 ORTHO05D040995 6.5e-06 54.7 54 42.6


User provided reference genes

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