Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB01g01120 Brassica carinata HOM05D007986 ORTHO05D013025 2.1e-183 645.6 329 100.0
BolC5t31599H Brassica oleracea HOM05D007986 ORTHO05D013025 4.0e-49 199.5 251 46.6
BolC2t10396H Brassica oleracea HOM05D007986 ORTHO05D020000 1.2e-40 171.4 227 45.4
BraA06t25658Z Brassica rapa HOM05D007986 ORTHO05D013025 7.5e-32 142.1 190 45.3
BraA05t21054Z Brassica rapa HOM05D007986 ORTHO05D003268 6.3e-31 139.0 273 36.3
BolC1t03331H Brassica oleracea HOM05D007986 ORTHO05D013025 7.0e-30 135.6 364 31.6
BcaB08g34673 Brassica carinata HOM05D007986 ORTHO05D003268 1.7e-28 131.0 340 33.8
BolC3t19085H Brassica oleracea HOM05D007986 ORTHO05D013025 2.3e-28 130.6 201 40.8
BcaB08g35489 Brassica carinata HOM05D007986 ORTHO05D020000 2.1e-26 124.0 162 48.8
BraA02t07804Z Brassica rapa HOM05D007986 ORTHO05D019931 2.1e-26 124.0 283 36.0
BolC4t24275H Brassica oleracea HOM05D007986 ORTHO05D003268 8.0e-26 122.1 389 28.5
BolC9t55761H Brassica oleracea HOM05D007986 ORTHO05D003268 8.0e-26 122.1 269 37.2
C05p39000 Brassica napus HOM05D007986 ORTHO05D020000 6.8e-25 119.0 205 42.4
BolC5t32638H Brassica oleracea HOM05D007986 ORTHO05D020000 6.8e-25 119.0 205 42.4
BcaB02g11464 Brassica carinata HOM05D007986 ORTHO05D003268 4.9e-23 112.8 72 72.2
BcaC09g49543 Brassica carinata HOM05D007986 ORTHO05D020000 2.7e-21 107.1 107 57.9
BolC8t48271H Brassica oleracea HOM05D003421 ORTHO05D003268 2.3e-20 104.0 271 30.6
BcaC03g16529 Brassica carinata HOM05D007986 ORTHO05D013025 3.0e-20 103.6 102 55.9
BcaB01g01106 Brassica carinata HOM05D003421 ORTHO05D003268 8.6e-20 102.1 97 51.5
BcaC01g01954 Brassica carinata HOM05D007986 ORTHO05D013025 2.5e-19 100.5 102 52.0
BcaC01g02257 Brassica carinata HOM05D007986 ORTHO05D013025 4.3e-19 99.8 102 53.9
BolC8t47709H Brassica oleracea HOM05D003421 ORTHO05D003268 7.3e-19 99.0 270 31.5
BcaC04g20964 Brassica carinata HOM05D003421 ORTHO05D003268 9.5e-19 98.6 276 33.3
BcaC02g10641 Brassica carinata HOM05D007986 ORTHO05D019931 1.6e-18 97.8 147 44.9
BolC9t56013H Brassica oleracea HOM05D003421 ORTHO05D003268 1.1e-17 95.1 271 30.6
BcaC07g37466 Brassica carinata HOM05D007986 ORTHO05D013025 3.1e-17 93.6 102 53.9
BcaC05g27018 Brassica carinata HOM05D007986 ORTHO05D013025 4.0e-17 93.2 102 51.0
BcaC01g02317 Brassica carinata HOM05D007986 ORTHO05D013025 8.9e-17 92.0 115 47.8
BcaC01g02169 Brassica carinata HOM05D007986 ORTHO05D013025 2.0e-16 90.9 102 47.1
BcaC06g36023 Brassica carinata HOM05D007986 ORTHO05D013025 2.0e-16 90.9 90 54.4
BcaB04g17960 Brassica carinata HOM05D007986 ORTHO05D003268 3.4e-16 90.1 67 64.2
BolC8t47961H Brassica oleracea HOM05D007986 ORTHO05D039790 6.4e-15 85.9 217 34.6
BcaC08g42955 Brassica carinata HOM05D003421 ORTHO05D003268 2.4e-14 84.0 232 31.9
BcaC06g36020 Brassica carinata HOM05D007986 ORTHO05D013025 4.1e-14 83.2 98 49.0
BcaC04g20865 Brassica carinata HOM05D007986 ORTHO05D019931 7.0e-14 82.4 118 45.8
BolC2t09439H Brassica oleracea HOM05D003421 ORTHO05D003268 3.5e-13 80.1 152 35.5
BolC4t25137H Brassica oleracea HOM05D003421 ORTHO05D003268 4.6e-13 79.7 236 32.6
BcaB06g27774 Brassica carinata HOM05D007986 ORTHO05D003268 7.8e-13 79.0 65 55.4
BcaC03g16132 Brassica carinata HOM05D007986 ORTHO05D003268 7.8e-13 79.0 65 58.5
BolC8t47944H Brassica oleracea HOM05D007986 ORTHO05D013025 1.0e-12 78.6 83 55.4
BcaC06g36481 Brassica carinata HOM05D003421 ORTHO05D003268 1.3e-12 78.2 152 34.2
BcaC01g02127 Brassica carinata HOM05D007986 ORTHO05D003268 5.1e-12 76.3 65 56.9
BolC3t19358H Brassica oleracea HOM05D003421 ORTHO05D003268 6.6e-12 75.9 241 32.0
BcaC07g37592 Brassica carinata HOM05D007986 ORTHO05D013025 1.1e-11 75.1 80 53.8
BcaC03g16524 Brassica carinata HOM05D007986 ORTHO05D003268 2.5e-11 73.9 65 53.8
BolC5t31957H Brassica oleracea HOM05D003421 ORTHO05D003268 3.3e-11 73.6 328 27.7
BcaC07g37580 Brassica carinata HOM05D003421 ORTHO05D003268 4.3e-11 73.2 188 31.9
BolC2t09874H Brassica oleracea HOM05D003421 ORTHO05D003268 5.6e-11 72.8 277 27.8
BcaC09g49635 Brassica carinata HOM05D003421 ORTHO05D003268 9.5e-11 72.0 151 33.8
BcaC01g02179 Brassica carinata HOM05D007986 ORTHO05D003268 1.2e-10 71.6 72 50.0
BcaC03g16496 Brassica carinata HOM05D007986 ORTHO05D003268 1.6e-10 71.2 62 54.8
BraA09t38727Z Brassica rapa HOM05D007986 ORTHO05D003268 1.6e-10 71.2 72 50.0
BolC1t03345H Brassica oleracea HOM05D003421 ORTHO05D003268 2.1e-10 70.9 239 31.0
BolC9t56870H Brassica oleracea HOM05D003421 ORTHO05D003268 2.1e-10 70.9 249 33.3
BcaB03g16541 Brassica carinata HOM05D007986 ORTHO05D003268 3.6e-10 70.1 68 51.5
BcaC08g46111 Brassica carinata HOM05D007986 ORTHO05D003268 8.1e-10 68.9 72 45.8
BcaC05g27617 Brassica carinata HOM05D007986 ORTHO05D003268 1.8e-09 67.8 65 52.3
BcaC05g27698 Brassica carinata HOM05D003421 ORTHO05D003268 1.8e-09 67.8 222 35.1
BcaC05g27711 Brassica carinata HOM05D007986 ORTHO05D013025 2.3e-09 67.4 76 51.3
BcaC04g20599 Brassica carinata HOM05D000589 ORTHO05D003268 5.2e-09 66.2 65 50.8
BolC4t24629H Brassica oleracea HOM05D003421 ORTHO05D003268 5.2e-09 66.2 253 28.1
BcaC05g27892 Brassica carinata HOM05D007986 ORTHO05D020000 6.8e-09 65.9 68 61.8
BcaC05g28706 Brassica carinata HOM05D003421 ORTHO05D003268 1.2e-08 65.1 186 31.7
BcaC06g35914 Brassica carinata HOM05D007986 ORTHO05D003268 1.2e-08 65.1 83 42.2
BcaC07g37480 Brassica carinata HOM05D007986 ORTHO05D003268 1.2e-08 65.1 65 49.2
BraA09t38708Z Brassica rapa HOM05D003421 ORTHO05D027538 1.5e-08 64.7 151 33.1
BolC5t32328H Brassica oleracea HOM05D007986 ORTHO05D003268 3.4e-08 63.5 65 49.2
BcaC03g16495 Brassica carinata HOM05D007986 ORTHO05D003268 4.4e-08 63.2 72 45.8
BcaB07g33928 Brassica carinata HOM05D007986 ORTHO05D003268 9.9e-08 62.0 57 52.6
BcaC05g27582 Brassica carinata HOM05D007986 ORTHO05D003268 9.9e-08 62.0 72 44.4
BolC3t19281H Brassica oleracea HOM05D003421 ORTHO05D003268 9.9e-08 62.0 209 32.5
BolC3t19083H Brassica oleracea HOM05D007986 ORTHO05D003268 2.2e-07 60.8 74 48.6
BcaC02g10561 Brassica carinata HOM05D003421 ORTHO05D003268 4.9e-07 59.7 274 28.8
BraA01t02722Z Brassica rapa HOM05D003421 ORTHO05D003268 4.9e-07 59.7 238 26.9
BcaC05g27017 Brassica carinata HOM05D007986 ORTHO05D019931 1.4e-06 58.2 89 39.3
C05p27640 Brassica napus HOM05D028664 ORTHO05D032055 1.9e-06 57.8 153 33.3
BolC5t31483H Brassica oleracea HOM05D028664 ORTHO05D032055 1.9e-06 57.8 153 33.3
BcaC01g02170 Brassica carinata HOM05D007986 ORTHO05D003268 2.4e-06 57.4 72 41.7
BolC7t42918H Brassica oleracea HOM05D003421 ORTHO05D003268 9.2e-06 55.5 120 32.5


User provided reference genes

Program Settings