Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB01g01079 Brassica carinata HOM05D000675 ORTHO05D000395 6.4e-126 454.1 236 100.0
BcaC03g18179 Brassica carinata HOM05D000675 ORTHO05D000395 2.1e-44 183.3 245 48.6
BraA05t21202Z Brassica rapa HOM05D000675 ORTHO05D000395 6.3e-41 171.8 248 47.6
BcaC02g10278 Brassica carinata HOM05D000675 ORTHO05D000395 4.5e-39 165.6 219 46.6
A10p13650 Brassica napus HOM05D000675 ORTHO05D000395 1.1e-37 161.0 245 46.9
BolC4t24605H Brassica oleracea HOM05D000675 ORTHO05D000395 2.3e-35 153.3 116 68.1
BcaC02g09509 Brassica carinata HOM05D000675 ORTHO05D000395 1.5e-34 150.6 263 41.8
BcaC08g45973 Brassica carinata HOM05D000675 ORTHO05D000395 4.4e-34 149.1 191 54.5
BolC4t25936H Brassica oleracea HOM05D000675 ORTHO05D000395 4.9e-33 145.6 248 41.5
BolC6t35505H Brassica oleracea HOM05D000675 ORTHO05D000395 1.8e-32 143.7 246 42.7
BcaC02g09792 Brassica carinata HOM05D000675 ORTHO05D000395 5.4e-32 142.1 222 45.0
A03p67890 Brassica napus HOM05D000675 ORTHO05D042509 7.0e-32 141.7 238 39.5
BraA01t02680Z Brassica rapa HOM05D000675 ORTHO05D042509 7.0e-32 141.7 238 39.5
BcaC09g51286 Brassica carinata HOM05D000675 ORTHO05D000395 2.0e-31 140.2 248 40.7
C01p14790 Brassica napus HOM05D000675 ORTHO05D000395 2.0e-31 140.2 248 40.7
BcaC04g21582 Brassica carinata HOM05D000675 ORTHO05D000395 5.9e-31 138.7 246 43.1
BcaB02g11112 Brassica carinata HOM05D000675 ORTHO05D000395 5.6e-29 132.1 256 40.2
BcaC01g02919 Brassica carinata HOM05D000675 ORTHO05D000395 1.4e-27 127.5 313 35.1
C03p58380 Brassica napus HOM05D000675 ORTHO05D000395 1.4e-27 127.5 313 35.1
BcaC03g14557 Brassica carinata HOM05D000675 ORTHO05D000395 6.8e-27 125.2 290 34.5
BraA02t09250Z Brassica rapa HOM05D000675 ORTHO05D000395 7.5e-26 121.7 245 37.6
BcaB05g22367 Brassica carinata HOM05D000675 ORTHO05D000395 1.7e-25 120.6 235 36.6
BolC8t46874H Brassica oleracea HOM05D000675 ORTHO05D000395 6.4e-25 118.6 190 41.6
BolC4t25141H Brassica oleracea HOM05D000675 ORTHO05D000395 4.1e-24 115.9 191 40.8
BcaB05g24643 Brassica carinata HOM05D000675 ORTHO05D000395 2.7e-23 113.2 268 34.7
BcaB06g27534 Brassica carinata HOM05D000675 ORTHO05D000395 3.5e-23 112.8 249 35.7
C04p43560 Brassica napus HOM05D000675 ORTHO05D011634 4.6e-23 112.5 108 56.5
A05p23390 Brassica napus HOM05D000675 ORTHO05D000395 6.0e-23 112.1 192 41.1
A05p09860 Brassica napus HOM05D000675 ORTHO05D002086 3.0e-22 109.8 283 28.6
A07p03210 Brassica napus HOM05D016948 ORTHO05D024172 5.0e-22 109.0 148 49.3
BraA07t28118Z Brassica rapa HOM05D012809 ORTHO05D024172 5.0e-22 109.0 148 49.3
BcaB03g15593 Brassica carinata HOM05D000675 ORTHO05D000395 2.8e-20 103.2 279 32.6
BcaB06g26589 Brassica carinata HOM05D000675 ORTHO05D000395 2.8e-20 103.2 241 33.2
BcaC08g45572 Brassica carinata HOM05D000675 ORTHO05D000395 2.8e-20 103.2 220 35.5
BcaB05g24177 Brassica carinata HOM05D000675 ORTHO05D000395 8.1e-20 101.7 242 34.3
C04p30850 Brassica napus HOM05D000675 ORTHO05D013510 6.8e-19 98.6 97 56.7
BcaB07g32139 Brassica carinata HOM05D000675 ORTHO05D000395 8.9e-19 98.2 239 33.5
BraA02t08657Z Brassica rapa HOM05D000675 ORTHO05D021814 2.4e-16 90.1 61 65.6
BcaB04g16995 Brassica carinata HOM05D000675 ORTHO05D003044 9.2e-16 88.2 128 49.2
BraA03t15124Z Brassica rapa HOM05D000675 ORTHO05D013510 1.6e-15 87.4 60 68.3
C06p32570 Brassica napus HOM05D000675 ORTHO05D000395 2.1e-15 87.0 62 61.3
C04p11110 Brassica napus HOM05D000675 ORTHO05D000395 3.5e-15 86.3 62 66.1
BolC4t22759H Brassica oleracea HOM05D000675 ORTHO05D000395 3.5e-15 86.3 62 66.1
C04p36550 Brassica napus HOM05D000675 ORTHO05D011634 3.0e-14 83.2 120 50.8
A06p22650 Brassica napus HOM05D000675 ORTHO05D000395 3.9e-14 82.8 163 41.7
BcaB07g31602 Brassica carinata HOM05D000675 ORTHO05D000395 1.1e-13 81.3 243 30.5
BcaB05g24759 Brassica carinata HOM05D000675 ORTHO05D000395 2.5e-13 80.1 62 59.7
C04p36560 Brassica napus HOM05D000675 ORTHO05D000395 2.5e-13 80.1 56 66.1
A07p03200 Brassica napus HOM05D000675 ORTHO05D013510 6.2e-12 75.5 54 64.8
BolC1t04292H Brassica oleracea HOM05D000675 ORTHO05D013510 8.1e-12 75.1 64 54.7
BraA01t02713Z Brassica rapa HOM05D000675 ORTHO05D027218 1.4e-11 74.3 67 50.7
BcaC06g36056 Brassica carinata HOM05D000675 ORTHO05D013510 2.3e-11 73.6 87 44.8
A09p29990 Brassica napus HOM05D000675 ORTHO05D002086 2.3e-11 73.6 250 25.2
C07p23780 Brassica napus HOM05D000675 ORTHO05D000395 2.3e-11 73.6 87 46.0
C07p27890 Brassica napus HOM05D000675 ORTHO05D000395 2.3e-11 73.6 64 53.1
BcaC01g02627 Brassica carinata HOM05D000675 ORTHO05D013510 3.1e-11 73.2 87 44.8
BraA04t16728Z Brassica rapa HOM05D000675 ORTHO05D000395 3.1e-11 73.2 87 44.8
BcaC09g49036 Brassica carinata HOM05D000675 ORTHO05D013510 4.0e-11 72.8 87 46.0
BcaB04g17899 Brassica carinata HOM05D000675 ORTHO05D011634 5.2e-11 72.4 66 50.0
BcaC01g05607 Brassica carinata HOM05D000675 ORTHO05D000395 6.8e-11 72.0 67 49.3
BolC3t14837H Brassica oleracea HOM05D000675 ORTHO05D000395 6.8e-11 72.0 67 49.3
A01p24790 Brassica napus HOM05D000675 ORTHO05D011634 1.5e-10 70.9 76 46.1
BcaB01g01871 Brassica carinata HOM05D000675 ORTHO05D011634 2.0e-10 70.5 66 48.5
BcaC09g50794 Brassica carinata HOM05D000675 ORTHO05D013510 2.0e-10 70.5 72 48.6
A01p19470 Brassica napus HOM05D000675 ORTHO05D021814 2.0e-10 70.5 221 30.8
A09p30130 Brassica napus HOM05D000675 ORTHO05D000395 2.0e-10 70.5 90 50.0
C07p21230 Brassica napus HOM05D000675 ORTHO05D000395 2.0e-10 70.5 76 46.1
BcaB01g02520 Brassica carinata HOM05D000675 ORTHO05D000395 2.6e-10 70.1 64 51.6
BcaB03g16529 Brassica carinata HOM05D000675 ORTHO05D003044 2.6e-10 70.1 62 51.6
BcaC09g51113 Brassica carinata HOM05D000675 ORTHO05D013510 5.8e-10 68.9 64 50.0
BcaC09g51109 Brassica carinata HOM05D000675 ORTHO05D013510 9.9e-10 68.2 64 50.0
BcaNung03743 Brassica carinata HOM05D000675 ORTHO05D000395 9.9e-10 68.2 67 47.8
BolC7t41640H Brassica oleracea HOM05D000675 ORTHO05D000395 9.9e-10 68.2 83 44.6
BolC6t38380H Brassica oleracea HOM05D000675 ORTHO05D021814 1.3e-09 67.8 246 30.1
BcaC05g26494 Brassica carinata HOM05D000675 ORTHO05D000395 1.7e-09 67.4 62 48.4
BolC9t54103H Brassica oleracea HOM05D000675 ORTHO05D011634 6.4e-09 65.5 76 44.7
BolC7t41255H Brassica oleracea HOM05D000675 ORTHO05D013510 8.4e-09 65.1 88 40.9
BcaC01g00314 Brassica carinata HOM05D000675 ORTHO05D000395 2.4e-08 63.5 74 41.9
BcaC04g18662 Brassica carinata HOM05D000675 ORTHO05D000395 3.2e-08 63.2 76 42.1
BcaC09g51111 Brassica carinata HOM05D000675 ORTHO05D013510 3.2e-08 63.2 64 48.4
BcaC02g11195 Brassica carinata HOM05D000675 ORTHO05D000395 5.4e-08 62.4 65 44.6
C04p19400 Brassica napus HOM05D000675 ORTHO05D000395 5.4e-08 62.4 65 44.6
BolC1t04030H Brassica oleracea HOM05D000675 ORTHO05D000395 5.4e-08 62.4 83 39.8
C04p65980 Brassica napus HOM05D000675 ORTHO05D000395 1.2e-07 61.2 83 38.6
BraA05t22466Z Brassica rapa HOM05D000675 ORTHO05D000395 1.2e-07 61.2 60 45.0
C03p78170 Brassica napus HOM05D000675 ORTHO05D003044 1.6e-07 60.8 283 25.4
BraA09t38562Z Brassica rapa HOM05D000675 ORTHO05D002086 2.1e-07 60.5 139 30.2
BcaC01g03691 Brassica carinata HOM05D000675 ORTHO05D000395 2.7e-07 60.1 60 46.7
BcaB05g22797 Brassica carinata HOM05D000675 ORTHO05D003044 4.6e-07 59.3 261 26.1
BcaB01g01025 Brassica carinata HOM05D000675 ORTHO05D000395 1.0e-06 58.2 60 46.7
C04p30840 Brassica napus HOM05D000675 ORTHO05D031737 1.0e-06 58.2 40 67.5
BcaC05g26677 Brassica carinata HOM05D000675 ORTHO05D011634 1.3e-06 57.8 57 52.6
BolC4t28102H Brassica oleracea HOM05D000675 ORTHO05D000395 1.3e-06 57.8 60 43.3
BolC7t40948H Brassica oleracea HOM05D000675 ORTHO05D024172 1.7e-06 57.4 168 33.9
BolC5t30500H Brassica oleracea HOM05D000675 ORTHO05D000395 3.0e-06 56.6 60 40.0
BcaC09g49264 Brassica carinata HOM05D000675 ORTHO05D000395 5.1e-06 55.8 183 30.1
C07p05480 Brassica napus HOM05D000675 ORTHO05D024172 5.1e-06 55.8 151 34.4
A02p36620 Brassica napus HOM05D000675 ORTHO05D021814 6.6e-06 55.5 141 34.8


User provided reference genes

Program Settings