Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB01g01078 Brassica carinata HOM05D000675 ORTHO05D011634 3.3e-59 231.5 117 100.0
C04p36550 Brassica napus HOM05D000675 ORTHO05D011634 5.7e-35 151.0 118 71.2
BcaC02g10278 Brassica carinata HOM05D000675 ORTHO05D000395 9.8e-35 150.2 118 72.0
BcaB04g16995 Brassica carinata HOM05D000675 ORTHO05D003044 1.3e-34 149.8 118 67.8
BcaB02g11112 Brassica carinata HOM05D000675 ORTHO05D000395 4.9e-34 147.9 118 67.8
BcaC02g09792 Brassica carinata HOM05D000675 ORTHO05D000395 8.3e-34 147.1 118 70.3
BcaC09g51286 Brassica carinata HOM05D000675 ORTHO05D000395 1.6e-32 142.9 118 67.8
C04p30840 Brassica napus HOM05D000675 ORTHO05D031737 2.7e-32 142.1 113 71.7
BcaB06g27534 Brassica carinata HOM05D000675 ORTHO05D000395 1.7e-31 139.4 117 67.5
C04p43560 Brassica napus HOM05D000675 ORTHO05D011634 1.5e-30 136.3 116 65.5
BcaC03g18179 Brassica carinata HOM05D000675 ORTHO05D000395 2.5e-30 135.6 116 66.4
A10p13650 Brassica napus HOM05D000675 ORTHO05D000395 2.5e-30 135.6 124 62.1
BraA07t31229Z Brassica rapa HOM05D000675 ORTHO05D000395 2.5e-30 135.6 124 62.1
BcaC04g21582 Brassica carinata HOM05D000675 ORTHO05D000395 2.1e-29 132.5 116 64.7
BcaC02g09509 Brassica carinata HOM05D000675 ORTHO05D000395 3.6e-29 131.7 116 63.8
BolC6t35505H Brassica oleracea HOM05D000675 ORTHO05D000395 8.0e-29 130.6 122 61.5
BcaC01g02919 Brassica carinata HOM05D000675 ORTHO05D000395 6.8e-28 127.5 119 56.3
A09p30130 Brassica napus HOM05D000675 ORTHO05D000395 6.8e-28 127.5 133 53.4
C03p58380 Brassica napus HOM05D000675 ORTHO05D000395 4.4e-27 124.8 133 51.1
BolC4t25141H Brassica oleracea HOM05D000675 ORTHO05D000395 3.2e-25 118.6 118 58.5
BcaC09g51678 Brassica carinata HOM05D000675 ORTHO05D011634 1.3e-23 113.2 94 67.0
C06p32580 Brassica napus HOM05D000675 ORTHO05D021814 7.3e-22 107.5 119 53.8
BcaB05g24643 Brassica carinata HOM05D000675 ORTHO05D000395 1.2e-21 106.7 117 52.1
BcaB05g22367 Brassica carinata HOM05D000675 ORTHO05D000395 1.6e-21 106.3 118 53.4
BolC6t38380H Brassica oleracea HOM05D000675 ORTHO05D021814 1.6e-21 106.3 118 53.4
BcaC03g14557 Brassica carinata HOM05D000675 ORTHO05D000395 6.2e-21 104.4 103 54.4
A01p19470 Brassica napus HOM05D000675 ORTHO05D021814 6.8e-20 100.9 122 52.5
BcaB07g31602 Brassica carinata HOM05D000675 ORTHO05D000395 2.0e-19 99.4 117 51.3
A05p23390 Brassica napus HOM05D000675 ORTHO05D000395 1.3e-18 96.7 118 50.8
BraA05t21202Z Brassica rapa HOM05D000675 ORTHO05D000395 1.3e-18 96.7 118 50.8
A02p36620 Brassica napus HOM05D000675 ORTHO05D021814 2.2e-18 95.9 122 48.4
BraA02t08657Z Brassica rapa HOM05D000675 ORTHO05D021814 2.2e-18 95.9 122 48.4
C06p36620 Brassica napus HOM05D000675 ORTHO05D000395 8.3e-18 94.0 122 50.0
BcaB03g15593 Brassica carinata HOM05D000675 ORTHO05D000395 1.9e-17 92.8 117 50.4
BcaB06g26589 Brassica carinata HOM05D000675 ORTHO05D000395 1.9e-17 92.8 117 48.7
BcaC08g45573 Brassica carinata HOM05D000675 ORTHO05D021814 4.1e-17 91.7 114 50.0
A05p09860 Brassica napus HOM05D000675 ORTHO05D002086 4.6e-16 88.2 117 49.6
BcaB05g24177 Brassica carinata HOM05D000675 ORTHO05D000395 1.7e-15 86.3 118 44.9
BcaB07g32139 Brassica carinata HOM05D000675 ORTHO05D000395 3.9e-15 85.1 118 50.0
BraA09t38562Z Brassica rapa HOM05D000675 ORTHO05D002086 8.1e-13 77.4 113 48.7
BcaB01g01312 Brassica carinata HOM05D000675 ORTHO05D003044 2.6e-11 72.4 119 42.0
BcaC01g02627 Brassica carinata HOM05D000675 ORTHO05D013510 3.4e-11 72.0 115 40.9
A09p29990 Brassica napus HOM05D000675 ORTHO05D002086 3.4e-11 72.0 94 51.1
BcaB07g33523 Brassica carinata HOM05D000675 ORTHO05D011634 4.4e-11 71.6 119 42.9
BcaNung03743 Brassica carinata HOM05D000675 ORTHO05D000395 1.3e-10 70.1 116 41.4
BcaB02g11371 Brassica carinata HOM05D000675 ORTHO05D011634 4.9e-10 68.2 116 41.4
BcaB07g31727 Brassica carinata HOM05D000675 ORTHO05D000395 4.9e-10 68.2 118 39.8
BcaC01g05607 Brassica carinata HOM05D000675 ORTHO05D000395 8.3e-10 67.4 121 40.5
BolC3t14837H Brassica oleracea HOM05D000675 ORTHO05D000395 8.3e-10 67.4 121 40.5
BcaB04g18178 Brassica carinata HOM05D000675 ORTHO05D011634 1.1e-09 67.0 117 36.8
BcaC06g36314 Brassica carinata HOM05D000675 ORTHO05D024172 1.1e-09 67.0 62 51.6
C05p17940 Brassica napus HOM05D000675 ORTHO05D011634 1.1e-09 67.0 118 41.5
BcaC04g18662 Brassica carinata HOM05D000675 ORTHO05D000395 3.2e-09 65.5 114 43.0
C07p05480 Brassica napus HOM05D000675 ORTHO05D024172 3.2e-09 65.5 62 51.6
BolC7t40948H Brassica oleracea HOM05D000675 ORTHO05D024172 3.2e-09 65.5 62 51.6
C08p03650 Brassica napus HOM05D000675 ORTHO05D003044 7.1e-09 64.3 106 39.6
BcaB04g17899 Brassica carinata HOM05D000675 ORTHO05D011634 9.2e-09 63.9 115 37.4
BcaC05g25846 Brassica carinata HOM05D000675 ORTHO05D011634 1.2e-08 63.5 118 41.5
C03p72520 Brassica napus HOM05D000675 ORTHO05D011634 1.2e-08 63.5 116 40.5
BolC5t30501H Brassica oleracea HOM05D000675 ORTHO05D011634 1.2e-08 63.5 118 41.5
BcaC01g01731 Brassica carinata HOM05D000675 ORTHO05D003044 1.6e-08 63.2 115 40.0
BcaB01g01871 Brassica carinata HOM05D000675 ORTHO05D011634 2.1e-08 62.8 119 38.7
BcaC09g50794 Brassica carinata HOM05D000675 ORTHO05D013510 2.1e-08 62.8 113 38.1
BcaB05g22797 Brassica carinata HOM05D000675 ORTHO05D003044 3.5e-08 62.0 119 37.0
A03p67550 Brassica napus HOM05D000675 ORTHO05D027218 3.5e-08 62.0 117 40.2
BraA01t02713Z Brassica rapa HOM05D000675 ORTHO05D027218 3.5e-08 62.0 117 40.2
BraA09t40504Z Brassica rapa HOM05D000675 ORTHO05D011634 3.5e-08 62.0 115 40.0
BcaB01g01025 Brassica carinata HOM05D000675 ORTHO05D000395 7.8e-08 60.8 113 40.7
BcaB05g24759 Brassica carinata HOM05D000675 ORTHO05D000395 1.0e-07 60.5 117 40.2
BcaB02g11266 Brassica carinata HOM05D000675 ORTHO05D011634 1.7e-07 59.7 115 38.3
C09p12140 Brassica napus HOM05D000675 ORTHO05D011634 3.0e-07 58.9 106 39.6
BolC1t03092H Brassica oleracea HOM05D000675 ORTHO05D003044 5.1e-07 58.2 106 35.8
BraA01t00879Z Brassica rapa HOM05D000675 ORTHO05D003044 8.6e-07 57.4 105 35.2
BcaB01g02521 Brassica carinata HOM05D000675 ORTHO05D011634 1.5e-06 56.6 130 36.9
BcaB01g03290 Brassica carinata HOM05D000675 ORTHO05D003044 1.5e-06 56.6 116 38.8
BcaC06g36056 Brassica carinata HOM05D000675 ORTHO05D013510 2.5e-06 55.8 105 37.1
C07p08420 Brassica napus HOM05D000675 ORTHO05D013510 2.5e-06 55.8 96 38.5
C03p78170 Brassica napus HOM05D000675 ORTHO05D003044 4.3e-06 55.1 121 37.2
BolC2t12303H Brassica oleracea HOM05D000675 ORTHO05D000395 4.3e-06 55.1 39 69.2
BcaC09g49894 Brassica carinata HOM05D000675 ORTHO05D013510 5.6e-06 54.7 106 34.9
C09p57870 Brassica napus HOM05D000675 ORTHO05D011634 9.5e-06 53.9 107 37.4
BolC5t33353H Brassica oleracea HOM05D000675 ORTHO05D013510 9.5e-06 53.9 105 37.1


User provided reference genes

Program Settings