Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB01g01064 Brassica carinata HOM05D000480 ORTHO05D000313 1.8e-75 285.8 142 100.0
BcaB08g34400 Brassica carinata HOM05D000480 ORTHO05D000313 3.2e-48 195.3 141 73.0
A09p62090 Brassica napus HOM05D000480 ORTHO05D000313 8.8e-46 187.2 141 68.8
BraA09t41575Z Brassica rapa HOM05D000480 ORTHO05D000313 8.8e-46 187.2 141 68.8
C08p45690 Brassica napus HOM05D000480 ORTHO05D000313 4.8e-44 181.4 141 66.7
BolC8t52123H Brassica oleracea HOM05D000480 ORTHO05D000313 6.3e-44 181.0 141 66.7
BcaC05g25356 Brassica carinata HOM05D000480 ORTHO05D000313 1.3e-36 156.8 152 60.5
BcaC05g24424 Brassica carinata HOM05D000480 ORTHO05D000313 1.8e-35 152.9 141 61.0
BcaC05g24430 Brassica carinata HOM05D000480 ORTHO05D000313 1.8e-35 152.9 141 61.0
BolC5t29113H Brassica oleracea HOM05D000480 ORTHO05D000313 1.8e-35 152.9 141 61.0
BolC5t29983H Brassica oleracea HOM05D000480 ORTHO05D000313 5.9e-34 147.9 152 57.2
A06p10520 Brassica napus HOM05D000480 ORTHO05D000313 1.3e-33 146.7 146 58.2
Thhalv10009831m.g Eutrema salsugineum HOM05D000480 ORTHO05D000313 2.2e-33 146.0 141 59.6
BcaB08g34401 Brassica carinata HOM05D000480 ORTHO05D000313 5.0e-33 144.8 146 56.2
C05p12350 Brassica napus HOM05D000480 ORTHO05D000313 1.5e-32 143.3 156 54.5
AT1G14480 Arabidopsis thaliana HOM05D000480 ORTHO05D000313 2.5e-32 142.5 145 55.9
Sp1g12850 Schrenkiella parvula HOM05D000480 ORTHO05D000313 1.6e-31 139.8 116 66.4
Aa31LG1G560 Aethionema arabicum HOM05D000480 ORTHO05D000313 2.1e-31 139.4 117 63.2
BcaB02g06502 Brassica carinata HOM05D000480 ORTHO05D000313 4.7e-31 138.3 144 55.6
BolC5t29986H Brassica oleracea HOM05D000480 ORTHO05D000313 4.7e-31 138.3 145 54.5
BcaC05g25355 Brassica carinata HOM05D000480 ORTHO05D000313 8.0e-31 137.5 145 54.5
C05p12390 Brassica napus HOM05D000480 ORTHO05D000313 8.0e-31 137.5 145 54.5
Aa31LG1G570 Aethionema arabicum HOM05D000480 ORTHO05D000313 1.0e-30 137.1 145 53.1
A06p10530 Brassica napus HOM05D000480 ORTHO05D000313 1.0e-30 137.1 144 52.8
BraA06t24233Z Brassica rapa HOM05D000480 ORTHO05D000313 1.0e-30 137.1 144 52.8
BcaC05g25352 Brassica carinata HOM05D000480 ORTHO05D000313 4.0e-30 135.2 134 57.5
BolC5t29984H Brassica oleracea HOM05D000480 ORTHO05D000313 2.6e-29 132.5 146 54.1
AT1G14500 Arabidopsis thaliana HOM05D000480 ORTHO05D000313 4.4e-29 131.7 141 51.1
BcaC07g41568 Brassica carinata HOM05D000480 ORTHO05D000313 5.7e-29 131.3 142 51.4
Carub.0001s1422 Capsella rubella HOM05D000480 ORTHO05D000313 2.8e-28 129.0 141 53.2
CARHR014950 Cardamine hirsuta HOM05D000480 ORTHO05D000313 3.1e-27 125.6 114 59.6
BraA09t41574Z Brassica rapa HOM05D000480 ORTHO05D000313 7.0e-27 124.4 135 52.6
BcaB02g06501 Brassica carinata HOM05D000480 ORTHO05D000313 4.7e-23 111.7 105 58.1
CARHR255880 Cardamine hirsuta HOM05D000480 ORTHO05D000313 2.4e-19 99.4 130 43.8
THA.LOC104813058 Tarenaya hassleriana HOM05D000480 ORTHO05D000313 9.1e-19 97.4 141 42.6
BcaB01g01508 Brassica carinata HOM05D000480 ORTHO05D000313 2.0e-18 96.3 141 39.0
AL6G44770 Arabidopsis lyrata HOM05D000480 ORTHO05D000313 5.9e-18 94.7 139 39.6
AT4G10720 Arabidopsis thaliana HOM05D000480 ORTHO05D000313 1.0e-17 94.0 113 46.9
Carub.0006s2949 Capsella rubella HOM05D000480 ORTHO05D000313 1.0e-17 94.0 141 39.0
BolC5t29987H Brassica oleracea HOM05D000480 ORTHO05D000313 3.8e-17 92.0 141 46.8
C05p12360 Brassica napus HOM05D000480 ORTHO05D000313 5.0e-17 91.7 142 44.4
THA.LOC104815248 Tarenaya hassleriana HOM05D000480 ORTHO05D000313 4.7e-15 85.1 114 43.9
BcaC04g21204 Brassica carinata HOM05D000480 ORTHO05D000313 1.8e-14 83.2 107 43.9
C09p34350 Brassica napus HOM05D000480 ORTHO05D000313 1.8e-14 83.2 107 43.9
BolC9t56278H Brassica oleracea HOM05D000480 ORTHO05D000313 1.8e-14 83.2 107 43.9
Aa31LG9G11340 Aethionema arabicum HOM05D000480 ORTHO05D000313 8.9e-14 80.9 114 40.4
Carub.0006s3131 Capsella rubella HOM05D000480 ORTHO05D000313 7.5e-13 77.8 114 39.5
Sp6g28600 Schrenkiella parvula HOM05D000480 ORTHO05D000313 7.5e-13 77.8 147 38.1
Aa31LG9G11380 Aethionema arabicum HOM05D000480 ORTHO05D000313 1.3e-12 77.0 111 39.6
Carub.0006s3173 Capsella rubella HOM05D000480 ORTHO05D000313 1.3e-12 77.0 109 41.3
CARHR267930 Cardamine hirsuta HOM05D000480 ORTHO05D000313 2.2e-12 76.3 135 36.3
Thhalv10013813m.g Eutrema salsugineum HOM05D000480 ORTHO05D000313 3.7e-12 75.5 111 38.7
AT5G54620 Arabidopsis thaliana HOM05D000480 ORTHO05D000313 6.3e-12 74.7 134 34.3
Thecc.10G054900 Theobroma cacao HOM05D000480 ORTHO05D000313 1.1e-11 73.9 117 38.5
Duzib114G0019 Durio zibethinus HOM05D000480 ORTHO05D000313 1.8e-11 73.2 114 38.6
Thecc.10G054300 Theobroma cacao HOM05D000480 ORTHO05D000313 2.4e-11 72.8 117 38.5
BcaB01g05047 Brassica carinata HOM05D000480 ORTHO05D000313 5.4e-11 71.6 114 42.1
BolC3t13315H Brassica oleracea HOM05D000480 ORTHO05D000313 5.4e-11 71.6 114 42.1
Thhalv10013583m.g Eutrema salsugineum HOM05D000480 ORTHO05D000313 9.2e-11 70.9 111 36.9
AT5G15500 Arabidopsis thaliana HOM05D000480 ORTHO05D000313 1.2e-10 70.5 114 41.2
C03p08180 Brassica napus HOM05D000480 ORTHO05D000313 1.6e-10 70.1 114 41.2
AL6G26350 Arabidopsis lyrata HOM05D000480 ORTHO05D000313 3.5e-10 68.9 114 39.5
BcaB02g06499 Brassica carinata HOM05D000480 ORTHO05D000313 5.9e-10 68.2 62 58.1
CARHR267920 Cardamine hirsuta HOM05D000480 ORTHO05D000313 7.8e-10 67.8 108 37.0
CARHR197810 Cardamine hirsuta HOM05D000480 ORTHO05D000313 1.0e-09 67.4 145 36.6
BcaB08g35822 Brassica carinata HOM05D000480 ORTHO05D000313 1.3e-09 67.0 108 36.1
C05p12400 Brassica napus HOM05D000480 ORTHO05D000313 1.3e-09 67.0 152 38.2
Thhalv10013476m.g Eutrema salsugineum HOM05D000480 ORTHO05D000313 1.3e-09 67.0 117 41.0
Duzib151G0332 Durio zibethinus HOM05D000480 ORTHO05D000313 2.3e-09 66.2 111 35.1
Sp6g16580 Schrenkiella parvula HOM05D000480 ORTHO05D000313 2.3e-09 66.2 110 36.4
Thecc.10G053900 Theobroma cacao HOM05D000480 ORTHO05D034848 2.3e-09 66.2 112 35.7
A10p11890 Brassica napus HOM05D000480 ORTHO05D000313 2.9e-09 65.9 111 35.1
C03p16980 Brassica napus HOM05D000480 ORTHO05D000313 2.9e-09 65.9 108 36.1
BraA10t43286Z Brassica rapa HOM05D000480 ORTHO05D000313 2.9e-09 65.9 111 35.1
C09p44960 Brassica napus HOM05D000480 ORTHO05D000313 3.8e-09 65.5 111 35.1
BcaC04g20322 Brassica carinata HOM05D000480 ORTHO05D000313 5.0e-09 65.1 111 35.1
BolC9t57374H Brassica oleracea HOM05D000480 ORTHO05D000313 5.0e-09 65.1 111 35.1
AL8G30070 Arabidopsis lyrata HOM05D000480 ORTHO05D000313 1.1e-08 63.9 111 31.5
BcaB05g22692 Brassica carinata HOM05D000480 ORTHO05D000313 1.5e-08 63.5 94 40.4
BcaC01g06315 Brassica carinata HOM05D000480 ORTHO05D000313 1.5e-08 63.5 108 35.2
A09p28510 Brassica napus HOM05D000480 ORTHO05D000313 4.3e-08 62.0 94 38.3
CiPaw.11G073300 Carya illinoinensis HOM05D000480 ORTHO05D000313 4.3e-08 62.0 115 31.3
BraA06t26905Z Brassica rapa HOM05D000480 ORTHO05D000313 5.6e-08 61.6 111 33.3
CiPaw.11G073200 Carya illinoinensis HOM05D000480 ORTHO05D000313 5.6e-08 61.6 115 30.4
BcaC04g21065 Brassica carinata HOM05D000480 ORTHO05D000313 7.3e-08 61.2 91 40.7
BcaC04g21067 Brassica carinata HOM05D000480 ORTHO05D000313 7.3e-08 61.2 91 40.7
C09p36070 Brassica napus HOM05D000480 ORTHO05D000313 7.3e-08 61.2 91 40.7
BolC9t56446H Brassica oleracea HOM05D000480 ORTHO05D000313 7.3e-08 61.2 91 40.7
Thecc.04G134700 Theobroma cacao HOM05D000480 ORTHO05D000313 7.3e-08 61.2 114 35.1
Thecc.10G096100 Theobroma cacao HOM05D000480 ORTHO05D000313 9.5e-08 60.8 128 33.6
C05p12380 Brassica napus HOM05D000480 ORTHO05D000313 1.2e-07 60.5 94 43.6
Glyma.12G162927 Glycine max HOM05D000480 ORTHO05D000313 2.1e-07 59.7 114 35.1
Hma1.2p1_2411F.1_g321610 Hydrangea macrophylla HOM05D000480 ORTHO05D000313 2.1e-07 59.7 115 34.8
Thhalv10029378m.g Eutrema salsugineum HOM05D000480 ORTHO05D000313 2.8e-07 59.3 66 47.0
Medtr8g073260 Medicago truncatula HOM05D000480 ORTHO05D000313 2.8e-07 59.3 126 32.5
TPR.G22961 Trifolium pratense HOM05D000480 ORTHO05D000313 2.8e-07 59.3 77 36.4
arahy.Tifrunner.gnm1.ann1.BT5HYM Arachis hypogaea HOM05D000480 ORTHO05D000313 3.6e-07 58.9 118 35.6
A03p14530 Brassica napus HOM05D000480 ORTHO05D000313 3.6e-07 58.9 102 35.3
TPR.G29443 Trifolium pratense HOM05D000480 ORTHO05D000313 3.6e-07 58.9 112 32.1
QL01p008822 Quercus lobata HOM05D000480 ORTHO05D000313 4.7e-07 58.5 121 32.2
CARHR267900 Cardamine hirsuta HOM05D000480 ORTHO05D000313 6.1e-07 58.2 123 31.7
Lj3g0015410 Lotus japonicus HOM05D000480 ORTHO05D000313 6.1e-07 58.2 91 36.3
BolC3t14110H Brassica oleracea HOM05D000480 ORTHO05D000313 8.0e-07 57.8 116 31.9
Cfa012460 Carpinus fangiana HOM05D000480 ORTHO05D000313 8.0e-07 57.8 114 31.6
TPR.G13724 Trifolium pratense HOM05D000480 ORTHO05D000313 8.0e-07 57.8 91 37.4
Cpa.g.sc1.345 Carica papaya HOM05D000480 ORTHO05D000313 1.0e-06 57.4 99 33.3
COL.COLO4_14918 Corchorus olitorius HOM05D000480 ORTHO05D034848 1.0e-06 57.4 88 36.4
BcaB01g04305 Brassica carinata HOM05D000480 ORTHO05D000313 2.3e-06 56.2 102 34.3
Dinv25130 Davidia involucrata HOM05D000480 ORTHO05D000313 2.3e-06 56.2 117 34.2
Psat4g105000 Pisum sativum HOM05D000480 ORTHO05D000313 3.0e-06 55.8 91 36.3
TPR.G33840 Trifolium pratense HOM05D000480 ORTHO05D000313 4.0e-06 55.5 94 34.0
Carub.0008s1488 Capsella rubella HOM05D000480 ORTHO05D000313 5.2e-06 55.1 108 32.4
Cfa021235 Carpinus fangiana HOM05D000480 ORTHO05D000313 5.2e-06 55.1 111 31.5
Phvul.011G163400 Phaseolus vulgaris HOM05D000480 ORTHO05D000313 6.8e-06 54.7 114 31.6
Psat4g134080 Pisum sativum HOM05D000480 ORTHO05D000313 6.8e-06 54.7 97 34.0
Thecc.01G132500 Theobroma cacao HOM05D000480 ORTHO05D000313 6.8e-06 54.7 136 31.6
Carub.0001s1420 Capsella rubella HOM05D000480 ORTHO05D000313 8.9e-06 54.3 32 78.1
Dinv01568 Davidia involucrata HOM05D000480 ORTHO05D000313 8.9e-06 54.3 127 29.9


User provided reference genes

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