Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB01g00798 Brassica carinata HOM05D000096 ORTHO05D010037 3.3e-80 301.6 146 100.0
BcaC04g19160 Brassica carinata HOM05D000096 ORTHO05D010037 7.1e-67 257.3 146 82.9
BcaC03g15185 Brassica carinata HOM05D000096 ORTHO05D010037 1.3e-65 253.1 146 79.5
BolC7t42420H Brassica oleracea HOM05D000096 ORTHO05D010037 1.5e-64 249.6 150 81.3
BolC2t10807H Brassica oleracea HOM05D000096 ORTHO05D010037 2.1e-63 245.7 153 79.1
A05p21280 Brassica napus HOM05D000096 ORTHO05D010037 7.1e-59 230.7 140 77.9
BraA05t21036Z Brassica rapa HOM05D000096 ORTHO05D010037 7.1e-59 230.7 140 77.9
C02p27650 Brassica napus HOM05D000096 ORTHO05D010037 2.1e-58 229.2 137 77.4
A02p28680 Brassica napus HOM05D000096 ORTHO05D010037 2.7e-58 228.8 140 77.1
C03p63050 Brassica napus HOM05D000096 ORTHO05D010037 2.7e-58 228.8 140 77.1
C05p53330 Brassica napus HOM05D000096 ORTHO05D010037 2.7e-58 228.8 140 77.1
BolC5t34006H Brassica oleracea HOM05D000096 ORTHO05D010037 7.9e-58 227.3 140 77.1
BolC5t33999H Brassica oleracea HOM05D000096 ORTHO05D010037 1.0e-57 226.9 145 73.8
BraA02t07903Z Brassica rapa HOM05D000096 ORTHO05D010037 1.0e-57 226.9 140 76.4
C09p64170 Brassica napus HOM05D000096 ORTHO05D010037 1.3e-57 226.5 131 80.9
C09p49170 Brassica napus HOM05D000096 ORTHO05D000045 3.9e-57 224.9 146 74.0
C02p47710 Brassica napus HOM05D000096 ORTHO05D010037 6.7e-57 224.2 142 77.5
BolC9t57766H Brassica oleracea HOM05D000096 ORTHO05D010037 8.7e-57 223.8 143 74.8
BolC8t48490H Brassica oleracea HOM05D000096 ORTHO05D010037 1.3e-55 219.9 150 72.0
BolC5t34013H Brassica oleracea HOM05D000096 ORTHO05D010037 2.4e-54 215.7 150 71.3
BolC2t09047H Brassica oleracea HOM05D000096 ORTHO05D010037 9.0e-54 213.8 140 74.3
BolC9t59254H Brassica oleracea HOM05D000096 ORTHO05D010037 1.1e-51 206.8 146 69.9
BolC5t31840H Brassica oleracea HOM05D000096 ORTHO05D010037 1.5e-48 196.4 150 66.7
C05p53360 Brassica napus HOM05D000096 ORTHO05D010037 4.8e-47 191.4 150 64.0
BcaC08g47173 Brassica carinata HOM05D000353 ORTHO05D010037 1.8e-46 189.5 135 64.4
BcaC09g50232 Brassica carinata HOM05D000096 ORTHO05D010037 3.1e-46 188.7 101 86.1
BcaC05g27600 Brassica carinata HOM05D000096 ORTHO05D010037 6.9e-46 187.6 101 86.1
C07p19090 Brassica napus HOM05D000096 ORTHO05D000045 1.2e-45 186.8 115 78.3
C05p35860 Brassica napus HOM05D000096 ORTHO05D000045 7.6e-45 184.1 116 78.4
BcaC05g27210 Brassica carinata HOM05D000096 ORTHO05D010037 1.0e-44 183.7 110 79.1
C02p27170 Brassica napus HOM05D000096 ORTHO05D010037 1.0e-44 183.7 116 77.6
C09p23310 Brassica napus HOM05D000096 ORTHO05D010037 9.3e-43 177.2 119 73.9
C09p17530 Brassica napus HOM05D000096 ORTHO05D010037 1.2e-42 176.8 105 79.0
A01p27030 Brassica napus HOM05D000096 ORTHO05D010037 2.1e-42 176.0 126 71.4
BcaB07g31907 Brassica carinata HOM05D000096 ORTHO05D010037 9.7e-40 167.2 96 88.5
BraA06t25745Z Brassica rapa HOM05D000096 ORTHO05D010037 1.7e-36 156.4 146 59.6
C01p30060 Brassica napus HOM05D000353 ORTHO05D000174 3.9e-33 145.2 117 61.5
A05p23810 Brassica napus HOM05D000096 ORTHO05D010037 1.7e-31 139.8 81 82.7
BcaC05g29108 Brassica carinata HOM05D000096 ORTHO05D010037 8.2e-31 137.5 77 80.5
BraA01t02836Z Brassica rapa HOM05D000096 ORTHO05D010037 3.4e-29 132.1 76 81.6
BcaB04g17265 Brassica carinata HOM05D000353 ORTHO05D000174 7.4e-24 114.4 77 64.9
BcaB02g11005 Brassica carinata HOM05D000096 ORTHO05D010037 9.7e-24 114.0 77 64.9
BcaB03g15975 Brassica carinata HOM05D000096 ORTHO05D010037 2.8e-23 112.5 77 64.9
BcaB02g06411 Brassica carinata HOM05D000096 ORTHO05D010037 6.3e-23 111.3 77 64.9
AL1G55630 Arabidopsis lyrata HOM05D000353 ORTHO05D000174 2.7e-18 95.9 110 42.7
AL2G19920 Arabidopsis lyrata HOM05D000353 ORTHO05D000174 2.7e-18 95.9 110 42.7
AL2G22250 Arabidopsis lyrata HOM05D000353 ORTHO05D000174 2.7e-18 95.9 110 42.7
AL7G11640 Arabidopsis lyrata HOM05D000353 ORTHO05D010269 2.7e-18 95.9 110 42.7
AL8G21920 Arabidopsis lyrata HOM05D000353 ORTHO05D000174 2.7e-18 95.9 110 42.7
AL4G20710 Arabidopsis lyrata HOM05D000353 ORTHO05D000174 3.6e-18 95.5 110 42.7
AL5G12710 Arabidopsis lyrata HOM05D000353 ORTHO05D000174 3.6e-18 95.5 110 42.7
AL6G41920 Arabidopsis lyrata HOM05D000353 ORTHO05D000174 3.6e-18 95.5 110 42.7
C05p53270 Brassica napus HOM05D000096 ORTHO05D010037 3.6e-18 95.5 58 74.1
AL1G50710 Arabidopsis lyrata HOM05D000353 ORTHO05D000174 4.7e-18 95.1 110 42.7
A09p11230 Brassica napus HOM05D000353 ORTHO05D000174 1.0e-17 94.0 110 40.9
BcaB05g23882 Brassica carinata HOM05D000353 ORTHO05D010037 1.4e-17 93.6 109 39.4
BolC1t00856H Brassica oleracea HOM05D000353 ORTHO05D010037 1.8e-17 93.2 127 36.2
BolC1t03913H Brassica oleracea HOM05D000353 ORTHO05D010037 1.8e-17 93.2 127 36.2
AL9U11500 Arabidopsis lyrata HOM05D000353 ORTHO05D000174 2.3e-17 92.8 110 41.8
BolC5t32061H Brassica oleracea HOM05D000353 ORTHO05D010037 1.5e-16 90.1 127 37.8
BcaB01g01096 Brassica carinata HOM05D000096 ORTHO05D010037 3.3e-16 89.0 77 53.2
C05p33350 Brassica napus HOM05D000353 ORTHO05D010037 3.3e-16 89.0 127 37.8
BolC2t09050H Brassica oleracea HOM05D000353 ORTHO05D000174 5.7e-16 88.2 114 40.4
A01p09370 Brassica napus HOM05D000096 ORTHO05D010037 9.7e-16 87.4 110 39.1
C01p13750 Brassica napus HOM05D000096 ORTHO05D010037 9.7e-16 87.4 110 39.1
C03p74460 Brassica napus HOM05D000096 ORTHO05D010037 9.7e-16 87.4 110 39.1
BolC6t35509H Brassica oleracea HOM05D000353 ORTHO05D000174 1.7e-15 86.7 126 37.3
BolC8t47319H Brassica oleracea HOM05D000353 ORTHO05D000174 2.8e-15 85.9 114 38.6
BcaB08g34639 Brassica carinata HOM05D000353 ORTHO05D000174 6.3e-15 84.7 114 39.5
C09p17500 Brassica napus HOM05D000353 ORTHO05D000174 6.3e-15 84.7 114 38.6
C09p23350 Brassica napus HOM05D000353 ORTHO05D000174 6.3e-15 84.7 114 38.6
A03p67580 Brassica napus HOM05D000353 ORTHO05D000174 8.2e-15 84.3 114 37.7
BolC6t39887H Brassica oleracea HOM05D000353 ORTHO05D000174 8.2e-15 84.3 113 38.9
A02p28640 Brassica napus HOM05D000353 ORTHO05D000174 1.1e-14 84.0 114 37.7
C05p53390 Brassica napus HOM05D000353 ORTHO05D010037 1.1e-14 84.0 114 37.7
C03p63100 Brassica napus HOM05D000353 ORTHO05D000174 1.4e-14 83.6 114 37.7
BolC2t10805H Brassica oleracea HOM05D000353 ORTHO05D010037 1.4e-14 83.6 114 37.7
BolC5t34017H Brassica oleracea HOM05D000353 ORTHO05D000174 1.4e-14 83.6 114 36.8
BcaC05g27207 Brassica carinata HOM05D000353 ORTHO05D000174 2.4e-14 82.8 114 37.7
A01p18290 Brassica napus HOM05D000353 ORTHO05D000174 2.4e-14 82.8 126 37.3
BolC5t31838H Brassica oleracea HOM05D000353 ORTHO05D000174 2.4e-14 82.8 114 37.7
A05p21320 Brassica napus HOM05D000353 ORTHO05D000174 3.1e-14 82.4 114 37.7
BolC4t26686H Brassica oleracea HOM05D000353 ORTHO05D000174 3.1e-14 82.4 114 37.7
A07p14780 Brassica napus HOM05D000353 ORTHO05D000174 5.3e-14 81.6 114 39.5
C05p35900 Brassica napus HOM05D000353 ORTHO05D000174 5.3e-14 81.6 114 38.6
BolC5t32309H Brassica oleracea HOM05D000353 ORTHO05D000174 9.1e-14 80.9 114 36.8
BolC5t34002H Brassica oleracea HOM05D000353 ORTHO05D000174 1.2e-13 80.5 114 36.8
BraA05t21040Z Brassica rapa HOM05D000353 ORTHO05D000174 4.5e-13 78.6 111 37.8
BcaC05g27394 Brassica carinata HOM05D000096 ORTHO05D010037 7.7e-13 77.8 92 40.2
BraA02t07899Z Brassica rapa HOM05D000353 ORTHO05D000174 7.7e-13 77.8 126 36.5
BraA01t02710Z Brassica rapa HOM05D000353 ORTHO05D000174 1.3e-12 77.0 126 35.7
Thhalv10029126m.g Eutrema salsugineum HOM05D000353 ORTHO05D000174 2.2e-12 76.3 117 33.3
BcaNung06211 Brassica carinata HOM05D000353 ORTHO05D000174 3.8e-12 75.5 114 36.0
BcaC07g37319 Brassica carinata HOM05D000353 ORTHO05D000174 5.0e-12 75.1 108 38.0
C09p64200 Brassica napus HOM05D000353 ORTHO05D000174 6.5e-12 74.7 126 34.9
BolC9t59257H Brassica oleracea HOM05D000353 ORTHO05D000174 6.5e-12 74.7 126 34.9
BcaC08g43102 Brassica carinata HOM05D000353 ORTHO05D000174 2.5e-11 72.8 118 33.9
A01p31990 Brassica napus HOM05D000353 ORTHO05D013802 2.5e-11 72.8 96 39.6
Thhalv10026883m.g Eutrema salsugineum HOM05D000353 ORTHO05D000174 2.5e-11 72.8 113 32.7
C06p03710 Brassica napus HOM05D000353 ORTHO05D010037 5.5e-11 71.6 108 36.1
BolC9t55253H Brassica oleracea HOM05D000353 ORTHO05D000174 5.5e-11 71.6 96 39.6
C02p47680 Brassica napus HOM05D000353 ORTHO05D000174 1.2e-10 70.5 96 38.5
C09p49200 Brassica napus HOM05D000353 ORTHO05D000174 1.6e-10 70.1 104 36.5
Thhalv10002212m.g Eutrema salsugineum HOM05D000353 ORTHO05D000174 2.7e-10 69.3 92 38.0
A06p13610 Brassica napus HOM05D000353 ORTHO05D000174 3.6e-10 68.9 96 37.5
Carub.0001s3687 Capsella rubella HOM05D000353 ORTHO05D000174 3.6e-10 68.9 97 33.0
Thhalv10029348m.g Eutrema salsugineum HOM05D000353 ORTHO05D000174 3.6e-10 68.9 129 29.5
C02p26060 Brassica napus HOM05D000353 ORTHO05D000174 4.7e-10 68.6 109 36.7
Thhalv10002267m.g Eutrema salsugineum HOM05D000353 ORTHO05D000174 4.7e-10 68.6 106 33.0
Thhalv10000499m.g Eutrema salsugineum HOM05D000353 ORTHO05D000174 1.0e-09 67.4 129 29.5
AT1G36510 Arabidopsis thaliana HOM05D000353 ORTHO05D010037 1.4e-09 67.0 116 31.9
C02p27610 Brassica napus HOM05D000353 ORTHO05D000174 1.8e-09 66.6 93 37.6
Thhalv10029208m.g Eutrema salsugineum HOM05D000353 ORTHO05D000174 1.8e-09 66.6 92 34.8
BcaB01g01518 Brassica carinata HOM05D000353 ORTHO05D000174 2.3e-09 66.2 84 40.5
BolC9t57770H Brassica oleracea HOM05D000353 ORTHO05D010037 2.3e-09 66.2 89 39.3
Thhalv10029167m.g Eutrema salsugineum HOM05D000353 ORTHO05D000174 2.3e-09 66.2 129 28.7
A05p27520 Brassica napus HOM05D000353 ORTHO05D000174 3.0e-09 65.9 109 35.8
Thhalv10000424m.g Eutrema salsugineum HOM05D000353 ORTHO05D000174 3.0e-09 65.9 129 28.7
Thhalv10029440m.g Eutrema salsugineum HOM05D000353 ORTHO05D000174 3.0e-09 65.9 110 30.9
Carub.0008s0742 Capsella rubella HOM05D000353 ORTHO05D010037 4.0e-09 65.5 97 34.0
A09p28970 Brassica napus HOM05D000353 ORTHO05D000174 1.5e-08 63.5 115 33.0
BraA09t38461Z Brassica rapa HOM05D000353 ORTHO05D000174 1.5e-08 63.5 115 33.0
BcaC09g51435 Brassica carinata HOM05D000353 ORTHO05D000174 2.0e-08 63.2 112 32.1
BolC1t01288H Brassica oleracea HOM05D000353 ORTHO05D000174 2.0e-08 63.2 112 32.1
Thhalv10002301m.g Eutrema salsugineum HOM05D000353 ORTHO05D000174 2.0e-08 63.2 124 29.0
Thhalv10015289m.g Eutrema salsugineum HOM05D000353 ORTHO05D000174 2.6e-08 62.8 125 32.8
BolC4t25352H Brassica oleracea HOM05D000353 ORTHO05D000174 3.3e-08 62.4 103 35.9
QL06p039579 Quercus lobata HOM05D002907 ORTHO05D000065 4.4e-08 62.0 103 33.0
C02p41140 Brassica napus HOM05D000647 ORTHO05D000174 5.7e-08 61.6 103 33.0
BolC8t46849H Brassica oleracea HOM05D000353 ORTHO05D018805 5.7e-08 61.6 80 40.0
Thhalv10002946m.g Eutrema salsugineum HOM05D000353 ORTHO05D000174 5.7e-08 61.6 95 31.6
Carub.0025s0004 Capsella rubella HOM05D000353 ORTHO05D000174 7.5e-08 61.2 104 32.7
AL1G48730 Arabidopsis lyrata HOM05D000353 ORTHO05D031316 9.7e-08 60.8 109 33.0
BcaNung06852 Brassica carinata HOM05D000353 ORTHO05D000174 9.7e-08 60.8 73 42.5
BcaC03g15824 Brassica carinata HOM05D000353 ORTHO05D000174 1.3e-07 60.5 113 33.6
A03p66100 Brassica napus HOM05D000353 ORTHO05D000174 2.2e-07 59.7 111 33.3
A05p24550 Brassica napus HOM05D000353 ORTHO05D000174 2.2e-07 59.7 111 33.3
BcaC06g36089 Brassica carinata HOM05D000353 ORTHO05D000174 2.8e-07 59.3 111 36.9
Carub.0011s0007 Capsella rubella HOM05D000353 ORTHO05D000174 2.8e-07 59.3 101 35.6
BolC2t10127H Brassica oleracea HOM05D000647 ORTHO05D000174 3.7e-07 58.9 103 32.0
Carub.0008s0745 Capsella rubella HOM05D000353 ORTHO05D000174 3.7e-07 58.9 97 30.9
C05p32800 Brassica napus HOM05D000353 ORTHO05D000174 4.8e-07 58.5 109 31.2
DCAR_027158 Daucus carota HOM05D002907 ORTHO05D005554 4.8e-07 58.5 128 25.8
A07p36560 Brassica napus HOM05D000353 ORTHO05D000174 6.3e-07 58.2 117 32.5
C03p18660 Brassica napus HOM05D000353 ORTHO05D000174 6.3e-07 58.2 111 31.5
C06p15640 Brassica napus HOM05D000353 ORTHO05D000174 6.3e-07 58.2 117 32.5
C08p07580 Brassica napus HOM05D000353 ORTHO05D000174 6.3e-07 58.2 82 35.4
BcaC02g09046 Brassica carinata HOM05D000353 ORTHO05D000174 1.1e-06 57.4 105 35.2
Carub.0007s3247 Capsella rubella HOM05D000353 ORTHO05D000174 1.1e-06 57.4 99 33.3
Peaxi162Scf00429g00624 Petunia axillaris HOM05D002441 ORTHO05D002376 1.1e-06 57.4 128 31.2
Carub.0001s3741 Capsella rubella HOM05D000353 ORTHO05D000174 1.4e-06 57.0 87 33.3
Peaxi162Scf11584g00003 Petunia axillaris HOM05D002441 ORTHO05D002376 1.4e-06 57.0 123 30.9
C09p27100 Brassica napus HOM05D000353 ORTHO05D000174 1.8e-06 56.6 111 30.6
A02p32050 Brassica napus HOM05D000353 ORTHO05D000174 2.4e-06 56.2 111 30.6
BraA02t08216Z Brassica rapa HOM05D000353 ORTHO05D000174 2.4e-06 56.2 111 30.6
Thhalv10023073m.g Eutrema salsugineum HOM05D000353 ORTHO05D000174 2.4e-06 56.2 81 34.6
AT3G32260 Arabidopsis thaliana HOM05D000353 ORTHO05D000174 3.1e-06 55.8 113 27.4
BolC2t10352H Brassica oleracea HOM05D000353 ORTHO05D000174 3.1e-06 55.8 111 31.5
BraA09t40707Z Brassica rapa HOM05D000353 ORTHO05D000174 3.1e-06 55.8 111 31.5
CAN.G419.22 Capsicum annuum HOM05D002907 ORTHO05D005554 3.1e-06 55.8 91 29.7
BcaC02g07613 Brassica carinata HOM05D000353 ORTHO05D000174 4.1e-06 55.5 113 33.6
BcaC05g29111 Brassica carinata HOM05D000353 ORTHO05D000174 5.3e-06 55.1 114 32.5
AT2G05642 Arabidopsis thaliana HOM05D000353 ORTHO05D000174 7.0e-06 54.7 126 32.5
Carub.0001s3517 Capsella rubella HOM05D000353 ORTHO05D000174 7.0e-06 54.7 85 36.5
Thhalv10019671m.g Eutrema salsugineum HOM05D000353 ORTHO05D000174 7.0e-06 54.7 79 34.2
BolC8t48495H Brassica oleracea HOM05D000353 ORTHO05D000174 9.1e-06 54.3 74 40.5
QL04p076347 Quercus lobata HOM05D002907 ORTHO05D000065 9.1e-06 54.3 101 29.7
QL93p0160_0004 Quercus lobata HOM05D002907 ORTHO05D000065 9.1e-06 54.3 101 29.7


User provided reference genes

Program Settings