Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB01g00761 Brassica carinata HOM05D004671 ORTHO05D005638 6.2e-103 377.5 192 100.0
Sp5g13050 Schrenkiella parvula HOM05D004671 ORTHO05D005638 1.1e-64 250.4 223 63.7
Thhalv10010290m.g Eutrema salsugineum HOM05D004671 ORTHO05D005638 3.1e-62 242.3 220 62.3
BcaC01g02382 Brassica carinata HOM05D004671 ORTHO05D005638 4.5e-61 238.4 220 60.9
C03p65870 Brassica napus HOM05D004671 ORTHO05D005638 4.5e-61 238.4 220 60.9
BolC3t18845H Brassica oleracea HOM05D004671 ORTHO05D005638 4.5e-61 238.4 220 60.9
BcaB02g09572 Brassica carinata HOM05D004671 ORTHO05D005638 6.5e-60 234.6 220 60.5
Thhalv10003189m.g Eutrema salsugineum HOM05D004671 ORTHO05D005638 5.5e-59 231.5 217 60.8
AL5G28510 Arabidopsis lyrata HOM05D004671 ORTHO05D005638 7.2e-59 231.1 218 59.2
BraA06t25741Z Brassica rapa HOM05D004671 ORTHO05D005638 9.4e-59 230.7 220 60.5
A06p28000 Brassica napus HOM05D004671 ORTHO05D005638 1.6e-58 229.9 220 60.0
AL6G42740 Arabidopsis lyrata HOM05D004671 ORTHO05D005638 2.1e-58 229.6 218 58.7
AT3G49000 Arabidopsis thaliana HOM05D004671 ORTHO05D005638 3.9e-57 225.3 222 58.6
Carub.0005s1517 Capsella rubella HOM05D004671 ORTHO05D005638 1.3e-55 220.3 220 57.3
CARHR157820 Cardamine hirsuta HOM05D004671 ORTHO05D005638 1.3e-52 210.3 213 57.3
Carub.0004s0531 Capsella rubella HOM05D004671 ORTHO05D005638 4.2e-51 205.3 224 54.0
Aa31LG4G17500 Aethionema arabicum HOM05D004671 ORTHO05D005638 2.1e-50 203.0 218 53.7
THA.LOC104818634 Tarenaya hassleriana HOM05D004671 ORTHO05D005638 1.4e-49 200.3 218 51.4
BolC8t50021H Brassica oleracea HOM05D004671 ORTHO05D005638 8.8e-49 197.6 116 85.3
C08p23970 Brassica napus HOM05D004671 ORTHO05D005638 1.5e-48 196.8 113 87.6
BcaC07g39376 Brassica carinata HOM05D004671 ORTHO05D005638 7.0e-46 188.0 108 86.1
CiPaw.03G107600 Carya illinoinensis HOM05D004671 ORTHO05D005638 8.5e-36 154.5 213 42.7
Eucgr.K00269 Eucalyptus grandis HOM05D004671 ORTHO05D005638 9.4e-35 151.0 211 40.8
Cpa.g.sc107.62 Carica papaya HOM05D004671 ORTHO05D005638 1.2e-34 150.6 214 41.1
MD07G1271200 Malus domestica HOM05D004671 ORTHO05D005638 1.2e-34 150.6 215 41.9
CANSAT21G1295 Cannabis sativa HOM05D004671 ORTHO05D005638 3.0e-33 146.0 207 42.0
CANSAT21G1725 Cannabis sativa HOM05D004671 ORTHO05D005638 3.0e-33 146.0 207 42.0
Thecc.03G178300 Theobroma cacao HOM05D004671 ORTHO05D005638 3.0e-33 146.0 214 40.7
MD01G1202100 Malus domestica HOM05D004671 ORTHO05D005638 1.2e-32 144.1 215 39.5
COL.COLO4_14329 Corchorus olitorius HOM05D004671 ORTHO05D005638 1.5e-32 143.7 214 40.7
MD07G1271300 Malus domestica HOM05D004671 ORTHO05D005638 1.5e-32 143.7 214 40.2
Ciclev10004721m.g Citrus clementina HOM05D004671 ORTHO05D005638 1.7e-31 140.2 214 38.8
FAN06G3892 Fragaria x ananassa HOM05D004671 ORTHO05D005638 1.7e-31 140.2 247 36.4
FAN06G5094 Fragaria x ananassa HOM05D004671 ORTHO05D005638 1.7e-31 140.2 247 36.4
TAR629G1771 Trochodendron aralioides HOM05D004671 ORTHO05D005638 1.7e-31 140.2 214 40.2
Haze_25041 Corylus avellana HOM05D004671 ORTHO05D005638 2.8e-31 139.4 211 39.8
Duzib205G1877 Durio zibethinus HOM05D004671 ORTHO05D005638 3.7e-31 139.0 233 37.8
Manes.14G025200 Manihot esculenta HOM05D004671 ORTHO05D005638 3.7e-31 139.0 214 38.8
Peaxi162Scf00848g00012 Petunia axillaris HOM05D004671 ORTHO05D005638 3.7e-31 139.0 213 39.0
Prupe.2G295500 Prunus persica HOM05D004671 ORTHO05D005638 4.8e-31 138.7 219 40.2
Cfa002753 Carpinus fangiana HOM05D004671 ORTHO05D005638 8.2e-31 137.9 213 39.0
Psat6g198360 Pisum sativum HOM05D004671 ORTHO05D005638 8.2e-31 137.9 218 38.5
Solyc06g036000.4 Solanum lycopersicum HOM05D004671 ORTHO05D005638 8.2e-31 137.9 213 39.0
GSVIVG01028933001 Vitis vinifera HOM05D004671 ORTHO05D005638 8.2e-31 137.9 214 39.7
Atru.chr1.442 Acer truncatum HOM05D004671 ORTHO05D005638 1.1e-30 137.5 214 36.9
Nitab4.5_0001951g0070 Nicotiana tabacum HOM05D004671 ORTHO05D005638 1.4e-30 137.1 213 38.5
PGR142G1152 Punica granatum HOM05D004671 ORTHO05D005638 2.4e-30 136.3 211 36.5
QL09p013914 Quercus lobata HOM05D004671 ORTHO05D005638 2.4e-30 136.3 213 39.4
Gohir.A09G041700 Gossypium hirsutum HOM05D004671 ORTHO05D005638 4.1e-30 135.6 218 37.6
Cc02_g02840 Coffea canephora HOM05D004671 ORTHO05D005638 7.0e-30 134.8 212 38.7
RcHm_v2.0_Chr6g0258831 Rosa chinensis HOM05D004671 ORTHO05D005638 7.0e-30 134.8 174 43.7
Gohir.D09G042500 Gossypium hirsutum HOM05D004671 ORTHO05D005638 9.1e-30 134.4 218 37.6
Gorai.006G048800 Gossypium raimondii HOM05D004671 ORTHO05D005638 9.1e-30 134.4 218 37.6
FvH4_7g29570 Fragaria vesca HOM05D004671 ORTHO05D005638 1.2e-29 134.0 228 36.8
Haze_13677 Corylus avellana HOM05D004671 ORTHO05D005638 1.6e-29 133.7 213 38.0
Nn3g16880 Nelumbo nucifera HOM05D004671 ORTHO05D005638 1.6e-29 133.7 214 37.4
CsaV3_3G017180 Cucumis sativus L. HOM05D004671 ORTHO05D005638 3.5e-29 132.5 212 38.7
Dinv24388 Davidia involucrata HOM05D004671 ORTHO05D005638 3.5e-29 132.5 214 37.9
FAN10G3685 Fragaria x ananassa HOM05D004671 ORTHO05D005638 3.5e-29 132.5 228 36.4
FAN10G4176 Fragaria x ananassa HOM05D004671 ORTHO05D005638 3.5e-29 132.5 228 36.4
Hund04757 Selenicereus undatus HOM05D004671 ORTHO05D005638 3.5e-29 132.5 168 45.8
Sopen06g011780 Solanum pennellii HOM05D004671 ORTHO05D005638 3.5e-29 132.5 132 49.2
Oeu004097.1 Olea europaea HOM05D004671 ORTHO05D005638 5.9e-29 131.7 169 46.2
Cfa022980 Carpinus fangiana HOM05D004671 ORTHO05D005638 7.7e-29 131.3 214 37.4
CAN.G208.79 Capsicum annuum HOM05D004671 ORTHO05D005638 1.3e-28 130.6 213 37.6
SalBow1G2445 Salvia bowleyana HOM05D004671 ORTHO05D005638 1.3e-28 130.6 213 36.6
Medtr1g101100 Medicago truncatula HOM05D004671 ORTHO05D005638 1.7e-28 130.2 206 35.9
arahy.Tifrunner.gnm1.ann1.U8RPI8 Arachis hypogaea HOM05D004671 ORTHO05D005638 3.8e-28 129.0 149 43.0
arahy.Tifrunner.gnm1.ann1.V0I5I8 Arachis hypogaea HOM05D004671 ORTHO05D005638 3.8e-28 129.0 149 43.0
FAN03G0738 Fragaria x ananassa HOM05D004671 ORTHO05D005638 3.8e-28 129.0 230 35.7
MSTRG.27109 Avicennia marina HOM05D004671 ORTHO05D005638 6.5e-28 128.3 214 36.0
ClCG05G008100 Citrullus lanatus HOM05D004671 ORTHO05D005638 6.5e-28 128.3 212 37.7
CDE04G3622 Ceratophyllum demersum HOM05D004671 ORTHO05D005638 8.5e-28 127.9 212 34.9
ECA233G0868 Erigeron canadensis HOM05D004671 ORTHO05D005638 1.1e-27 127.5 218 34.4
HanXRQChr06g0163751 Helianthus annuus HOM05D004671 ORTHO05D005638 1.1e-27 127.5 213 34.3
VMungo0720G2100 Vigna mungo HOM05D004671 ORTHO05D005638 1.1e-27 127.5 147 45.6
HanXRQChr15g0497081 Helianthus annuus HOM05D004671 ORTHO05D005638 1.9e-27 126.7 218 34.4
Phvul.007G071300 Phaseolus vulgaris HOM05D004671 ORTHO05D005638 2.5e-27 126.3 147 45.6
FAN01G2609 Fragaria x ananassa HOM05D004671 ORTHO05D005638 4.2e-27 125.6 176 40.9
SHI26612 Sapria himalayana HOM05D004671 ORTHO05D005638 4.2e-27 125.6 214 36.4
Ca_10754_v3 Cicer arietinum L. HOM05D004671 ORTHO05D005638 7.2e-27 124.8 212 35.4
MELO3C031814.2 Cucumis melo HOM05D004671 ORTHO05D005638 9.4e-27 124.4 208 37.5
Potri.015G144900 Populus trichocarpa HOM05D004671 ORTHO05D005638 9.4e-27 124.4 214 36.0
vmacro09835 Vaccinium macrocarpon HOM05D004671 ORTHO05D005638 1.6e-26 123.6 215 36.7
HanXRQChr10g0304161 Helianthus annuus HOM05D004671 ORTHO05D005638 2.7e-26 122.9 219 34.2
RcHm_v2.0_Chr1g0377571 Rosa chinensis HOM05D004671 ORTHO05D005638 2.7e-26 122.9 237 35.0
Lalb_Chr06g0161161 Lupinus albus HOM05D004671 ORTHO05D005638 3.6e-26 122.5 214 36.9
Sabra15G0154400 Salix brachista HOM05D004671 ORTHO05D005638 3.6e-26 122.5 239 35.1
SalBow1G5895 Salvia bowleyana HOM05D004671 ORTHO05D005638 3.6e-26 122.5 223 35.0
TPR.G27007 Trifolium pratense HOM05D004671 ORTHO05D005638 6.1e-26 121.7 216 34.3
TWI14G0685 Tripterygium wilfordii HOM05D004671 ORTHO05D005638 8.0e-26 121.3 214 34.6
SGA_v2.0_scaffold60G21057 Striga asiatica HOM05D004671 ORTHO05D005638 1.8e-25 120.2 215 35.3
Migut.K00770 Erythranthe guttata HOM05D004671 ORTHO05D005638 2.3e-25 119.8 213 33.8
Lsat_1_v5_gn_8_8441 Lactuca sativa HOM05D004671 ORTHO05D005638 3.0e-25 119.4 132 46.2
Aqoxy3G03421 Aquilegia oxysepala HOM05D004671 ORTHO05D005638 4.0e-25 119.0 215 33.5
vmacro21316 Vaccinium macrocarpon HOM05D004671 ORTHO05D005638 5.2e-25 118.6 178 40.4
Rhsim09G0198100 Rhododendron simsii HOM05D004671 ORTHO05D005638 6.8e-25 118.2 125 48.0
Sed0027520 Sechium edule HOM05D004671 ORTHO05D005638 8.8e-25 117.9 209 34.4
GSVIVG01017918001 Vitis vinifera HOM05D004671 ORTHO05D005638 8.8e-25 117.9 203 37.4
EL10Ac3g05622 Beta vulgaris HOM05D004671 ORTHO05D005638 1.5e-24 117.1 205 36.6
Glyma.20G159500 Glycine max HOM05D004671 ORTHO05D005638 1.5e-24 117.1 212 34.0
Sc13g0008790 Simmondsia chinensis HOM05D004671 ORTHO05D005638 1.5e-24 117.1 207 35.3
Glyma.10G234800 Glycine max HOM05D004671 ORTHO05D005638 4.4e-24 115.5 212 33.5
Lsat_1_v5_gn_3_14041 Lactuca sativa HOM05D004671 ORTHO05D005638 4.4e-24 115.5 207 33.8
DCAR_010301 Daucus carota HOM05D004671 ORTHO05D005638 5.7e-24 115.2 214 35.0
DCAR_015049 Daucus carota HOM05D004671 ORTHO05D005638 1.3e-23 114.0 214 35.0
Nitab4.5_0000080g0100 Nicotiana tabacum HOM05D004671 ORTHO05D005638 1.3e-23 114.0 200 36.0
Lj5g0019412 Lotus japonicus HOM05D004671 ORTHO05D005638 1.7e-23 113.6 206 35.9
AUR62015967 Chenopodium quinoa HOM05D004671 ORTHO05D005638 2.8e-23 112.8 205 36.1
PSO017G5643 Papaver somniferum HOM05D004671 ORTHO05D005638 3.7e-23 112.5 211 35.1
PSO063G7539 Papaver somniferum HOM05D004671 ORTHO05D005638 3.7e-23 112.5 211 35.1
Sc13g0008760 Simmondsia chinensis HOM05D004671 ORTHO05D005638 2.7e-21 106.3 207 33.3
AUR62021173 Chenopodium quinoa HOM05D004671 ORTHO05D005638 3.5e-21 105.9 177 37.3
unitig_37.g12531 Utricularia gibba HOM05D004671 ORTHO05D005638 4.5e-21 105.5 147 40.8
arahy.Tifrunner.gnm1.ann1.4LKL39 Arachis hypogaea HOM05D004671 ORTHO05D005638 1.7e-20 103.6 150 38.0
HPP92_020192 Vanilla planifolia HOM05D004671 ORTHO05D005638 2.3e-20 103.2 124 41.1
Actinidia03123 Actinidia chinensis HOM05D004671 ORTHO05D005638 2.5e-19 99.8 153 37.9
Ah.13g076510 Amaranthus hybridus HOM05D004671 ORTHO05D007692 3.3e-19 99.4 128 41.4
Sed0007536 Sechium edule HOM05D004671 ORTHO05D005638 9.5e-19 97.8 152 39.5
arahy.Tifrunner.gnm1.ann1.R5FQEP Arachis hypogaea HOM05D004671 ORTHO05D005638 2.1e-18 96.7 152 36.2
Ah.13g068640 Amaranthus hybridus HOM05D004671 ORTHO05D005638 8.0e-18 94.7 127 39.4
ATR0737G144 Amborella trichopoda HOM05D004671 ORTHO05D005638 3.0e-17 92.8 214 30.4
Migut.K01220 Erythranthe guttata HOM05D004671 ORTHO05D005638 9.8e-16 87.8 200 30.0
Mapoly0133s0004 Marchantia polymorpha HOM05D004671 ORTHO05D005638 7.8e-13 78.2 225 28.4
Zm00001eb160040 Zea mays HOM05D004671 ORTHO05D005638 2.1e-10 70.1 113 33.6
Pp3c16_7220 Physcomitrium patens HOM05D004671 ORTHO05D005638 4.7e-10 68.9 220 23.6
Os01g0679000 Oryza sativa ssp. japonica HOM05D004671 ORTHO05D005638 1.4e-09 67.4 114 35.1
HanXRQChr06g0163701 Helianthus annuus HOM05D001754 ORTHO05D005638 1.2e-08 64.3 165 29.1
MCO01G383 Micromonas commoda HOM05D004671 ORTHO05D005638 1.2e-08 64.3 132 32.6
AagrBONN_evm.TU.Sc2ySwM_344.423 Anthoceros agrestis HOM05D004671 ORTHO05D005638 2.0e-08 63.5 127 26.8
SMO143G0293 Selaginella moellendorffii HOM05D004671 ORTHO05D005638 9.8e-08 61.2 213 25.8
CSS0035516 Camellia sinensis var. sinensis HOM05D004671 ORTHO05D005638 3.7e-07 59.3 130 33.1


User provided reference genes

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