Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB01g00756 Brassica carinata HOM05D002671 ORTHO05D002985 1.5e-37 159.1 84 100.0
BcaB01g00757 Brassica carinata HOM05D002671 ORTHO05D002985 1.5e-37 159.1 84 100.0
BraA06t24952Z Brassica rapa HOM05D002671 ORTHO05D002985 1.3e-33 146.0 85 94.1
Thhalv10010995m.g Eutrema salsugineum HOM05D002671 ORTHO05D002985 3.4e-29 131.3 84 83.3
AT3G49055 Arabidopsis thaliana HOM05D002671 ORTHO05D002985 3.5e-26 121.3 84 75.0
A06p18700 Brassica napus HOM05D002671 ORTHO05D010333 1.5e-24 115.9 72 86.1
BcaC07g39380 Brassica carinata HOM05D002671 ORTHO05D002985 1.9e-24 115.5 85 76.5
CARHR157880 Cardamine hirsuta HOM05D002671 ORTHO05D002985 3.3e-24 114.8 84 70.2
AL5G28570 Arabidopsis lyrata HOM05D002671 ORTHO05D002985 1.6e-23 112.5 84 69.0
Carub.0005s1525 Capsella rubella HOM05D002671 ORTHO05D002985 2.6e-21 105.1 84 70.2
BolC8t50026H Brassica oleracea HOM05D000163 ORTHO05D000962 1.2e-18 96.3 72 75.0
C08p24040 Brassica napus HOM05D000163 ORTHO05D000962 4.6e-18 94.4 71 71.8
Aa31LG4G17530 Aethionema arabicum HOM05D002671 ORTHO05D002985 3.3e-16 88.2 87 58.6
Sp5g13020 Schrenkiella parvula HOM05D002671 ORTHO05D002985 6.8e-14 80.5 46 95.7
Thhalv10010940m.g Eutrema salsugineum HOM05D002671 ORTHO05D002985 2.4e-11 72.0 71 56.3
THA.LOC104820571 Tarenaya hassleriana HOM05D002671 ORTHO05D002985 6.6e-09 63.9 74 50.0
Potri.015G146100 Populus trichocarpa HOM05D002671 ORTHO05D002985 2.1e-07 58.9 75 50.7
Thecc.03G179800 Theobroma cacao HOM05D002671 ORTHO05D002985 2.1e-07 58.9 56 62.5
Cfa016260 Carpinus fangiana HOM05D002671 ORTHO05D002985 4.7e-07 57.8 85 48.2
Duzib205G1095 Durio zibethinus HOM05D002671 ORTHO05D002985 6.2e-07 57.4 75 49.3
GSVIVG01028910001 Vitis vinifera HOM05D002671 ORTHO05D002985 6.2e-07 57.4 71 52.1
Haze_00012 Corylus avellana HOM05D002671 ORTHO05D002985 8.1e-07 57.0 89 50.6
FAN03G2117 Fragaria x ananassa HOM05D002671 ORTHO05D002985 8.1e-07 57.0 56 62.5
Sabra15G0155400 Salix brachista HOM05D002671 ORTHO05D002985 8.1e-07 57.0 75 50.7
Ciclev10006475m.g Citrus clementina HOM05D002671 ORTHO05D002985 1.1e-06 56.6 55 61.8
Manes.06G149700 Manihot esculenta HOM05D002671 ORTHO05D002985 1.1e-06 56.6 88 47.7
FvH4_7g29830 Fragaria vesca HOM05D002671 ORTHO05D002985 1.8e-06 55.8 56 60.7
FAN01G0120 Fragaria x ananassa HOM05D002671 ORTHO05D002985 1.8e-06 55.8 56 60.7
FAN06G0467 Fragaria x ananassa HOM05D002671 ORTHO05D002985 1.8e-06 55.8 56 60.7
FAN06G4738 Fragaria x ananassa HOM05D002671 ORTHO05D002985 1.8e-06 55.8 56 60.7
FAN10G0021 Fragaria x ananassa HOM05D002671 ORTHO05D002985 1.8e-06 55.8 56 60.7
FAN10G2158 Fragaria x ananassa HOM05D002671 ORTHO05D002985 1.8e-06 55.8 56 60.7
FAN03G3084 Fragaria x ananassa HOM05D002671 ORTHO05D002985 2.4e-06 55.5 56 60.7
CSS0001242 Camellia sinensis var. sinensis HOM05D002671 ORTHO05D002985 4.0e-06 54.7 78 51.3
Rhsim03G0188000 Rhododendron simsii HOM05D002671 ORTHO05D002985 4.0e-06 54.7 56 60.7
Actinidia25888 Actinidia chinensis HOM05D002671 ORTHO05D002985 5.2e-06 54.3 72 52.8
Actinidia34131 Actinidia chinensis HOM05D002671 ORTHO05D002985 5.2e-06 54.3 56 57.1
TWI39G0831 Tripterygium wilfordii HOM05D002671 ORTHO05D002985 5.2e-06 54.3 66 54.5
Cpa.g.sc107.74 Carica papaya HOM05D002671 ORTHO05D002985 6.9e-06 53.9 73 45.2
ATR0680G142 Amborella trichopoda HOM05D002671 ORTHO05D002985 9.0e-06 53.5 58 60.3
Dinv35225 Davidia involucrata HOM05D002671 ORTHO05D002985 9.0e-06 53.5 57 63.2
MD01G1204900 Malus domestica HOM05D002671 ORTHO05D002985 9.0e-06 53.5 86 45.3


User provided reference genes

Program Settings