Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB01g00728 Brassica carinata HOM05D009446 ORTHO05D018642 3.7e-38 161.0 79 100.0
BraA06t24925Z Brassica rapa HOM05D009446 ORTHO05D018642 1.1e-29 132.9 79 87.3
A06p18480 Brassica napus HOM05D009446 ORTHO05D018642 3.2e-29 131.3 76 88.2
C08p24300 Brassica napus HOM05D009446 ORTHO05D018642 2.1e-28 128.6 76 86.8
BolC8t50046H Brassica oleracea HOM05D009446 ORTHO05D018642 2.1e-28 128.6 76 86.8
BolC8t50048H Brassica oleracea HOM05D009446 ORTHO05D018642 2.7e-28 128.3 79 84.8
Sp5g12800 Schrenkiella parvula HOM05D009446 ORTHO05D018642 6.0e-20 100.5 62 83.9
BraA06t24926Z Brassica rapa HOM05D009446 ORTHO05D018642 1.2e-12 76.3 79 58.2
CARHR158200 Cardamine hirsuta HOM05D009446 ORTHO05D012588 4.3e-10 67.8 65 56.9
CARHR158220 Cardamine hirsuta HOM05D009446 ORTHO05D012588 2.8e-09 65.1 66 57.6
A01p24840 Brassica napus HOM05D009446 ORTHO05D012588 3.7e-09 64.7 67 55.2
AL5G29030 Arabidopsis lyrata HOM05D009446 ORTHO05D012588 1.1e-08 63.2 68 57.4
AT3G49305 Arabidopsis thaliana HOM05D009446 ORTHO05D012588 1.4e-08 62.8 74 52.7
Sp5g12780 Schrenkiella parvula HOM05D009446 ORTHO05D012588 4.0e-08 61.2 66 54.5
AT3G49300 Arabidopsis thaliana HOM05D009446 ORTHO05D012588 2.0e-07 58.9 62 54.8
BcaC09g49934 Brassica carinata HOM05D009446 ORTHO05D012588 3.4e-07 58.2 70 55.7
BolC1t03039H Brassica oleracea HOM05D009446 ORTHO05D012588 3.4e-07 58.2 70 55.7
C01p31040 Brassica napus HOM05D009446 ORTHO05D012588 1.7e-06 55.8 70 54.3
Sp5g12770 Schrenkiella parvula HOM05D009446 ORTHO05D012588 1.7e-06 55.8 62 51.6
AL5G29040 Arabidopsis lyrata HOM05D009446 ORTHO05D012588 3.8e-06 54.7 70 57.1
CARHR293060 Cardamine hirsuta HOM05D009446 ORTHO05D012588 3.8e-06 54.7 71 52.1
AL5G28960 Arabidopsis lyrata HOM05D009446 ORTHO05D080753 4.9e-06 54.3 75 52.0


User provided reference genes

Program Settings