Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB01g00721 Brassica carinata HOM05D003839 ORTHO05D003352 5.9e-103 377.5 182 100.0
BcaB04g17113 Brassica carinata HOM05D003839 ORTHO05D003352 1.2e-95 353.2 181 94.5
BcaB07g32949 Brassica carinata HOM05D003839 ORTHO05D003352 6.5e-94 347.4 181 91.7
BcaB07g32609 Brassica carinata HOM05D003839 ORTHO05D003352 2.5e-93 345.5 177 94.4
BcaB03g16839 Brassica carinata HOM05D003839 ORTHO05D003352 4.2e-93 344.7 181 91.2
BcaB06g27258 Brassica carinata HOM05D003839 ORTHO05D003352 3.6e-92 341.7 181 90.6
BcaB01g02875 Brassica carinata HOM05D003839 ORTHO05D003352 1.7e-89 332.8 181 86.7
BcaB03g16489 Brassica carinata HOM05D003839 ORTHO05D003352 2.9e-70 268.9 137 92.0
BcaC06g33695 Brassica carinata HOM05D003839 ORTHO05D003352 2.0e-55 219.5 183 62.8
C02p27640 Brassica napus HOM05D003839 ORTHO05D003352 4.6e-55 218.4 184 62.5
BcaC05g29109 Brassica carinata HOM05D003839 ORTHO05D003352 1.0e-54 217.2 183 61.2
C05p53370 Brassica napus HOM05D003839 ORTHO05D003352 1.0e-54 217.2 183 61.2
C05p53340 Brassica napus HOM05D003839 ORTHO05D003352 2.3e-54 216.1 183 61.2
BolC8t48491H Brassica oleracea HOM05D003839 ORTHO05D003352 2.3e-54 216.1 183 61.7
BcaC05g27601 Brassica carinata HOM05D003839 ORTHO05D003352 8.6e-54 214.2 183 61.2
C03p63060 Brassica napus HOM05D003839 ORTHO05D003352 8.6e-54 214.2 183 61.2
C05p35870 Brassica napus HOM05D003839 ORTHO05D003352 8.6e-54 214.2 183 61.2
BolC5t32306H Brassica oleracea HOM05D003839 ORTHO05D003352 1.1e-53 213.8 183 60.7
BraA02t07902Z Brassica rapa HOM05D003839 ORTHO05D003352 7.3e-53 211.1 183 60.1
A05p21290 Brassica napus HOM05D003839 ORTHO05D003352 2.3e-51 206.1 194 57.7
BraA05t21037Z Brassica rapa HOM05D003839 ORTHO05D003352 2.3e-51 206.1 194 57.7
A02p28670 Brassica napus HOM05D003839 ORTHO05D003352 6.8e-51 204.5 183 59.0
BcaC03g15184 Brassica carinata HOM05D003839 ORTHO05D003352 1.5e-50 203.4 183 60.1
BcaB07g32710 Brassica carinata HOM05D003839 ORTHO05D003352 2.6e-50 202.6 183 58.5
BolC5t34007H Brassica oleracea HOM05D003839 ORTHO05D003352 7.5e-50 201.1 183 58.5
BraA01t02837Z Brassica rapa HOM05D003839 ORTHO05D003352 6.6e-46 188.0 156 62.2
BcaC09g50233 Brassica carinata HOM05D003839 ORTHO05D003352 5.6e-45 184.9 183 56.8
BcaB01g01517 Brassica carinata HOM05D003839 ORTHO05D003352 4.7e-44 181.8 183 54.6
BraA01t02749Z Brassica rapa HOM05D003839 ORTHO05D003352 4.7e-44 181.8 182 54.4
BcaC06g36011 Brassica carinata HOM05D003839 ORTHO05D003352 1.1e-43 180.6 183 55.2
BolC6t38134H Brassica oleracea HOM05D003839 ORTHO05D003352 1.1e-43 180.6 182 53.8
C04p41030 Brassica napus HOM05D003839 ORTHO05D003352 1.8e-43 179.9 181 52.5
BolC4t25686H Brassica oleracea HOM05D003839 ORTHO05D003352 1.8e-43 179.9 181 52.5
BcaB08g35818 Brassica carinata HOM05D003839 ORTHO05D003352 2.3e-43 179.5 182 51.1
BcaC04g22104 Brassica carinata HOM05D003839 ORTHO05D003352 3.1e-43 179.1 183 55.2
BolC2t09048H Brassica oleracea HOM05D003839 ORTHO05D003352 8.9e-43 177.6 183 54.6
A05p21770 Brassica napus HOM05D003839 ORTHO05D003352 2.6e-42 176.0 141 63.8
BraA05t21098Z Brassica rapa HOM05D003839 ORTHO05D003352 2.6e-42 176.0 141 63.8
BolC9t57767H Brassica oleracea HOM05D003839 ORTHO05D003352 5.8e-42 174.9 183 53.6
C02p27160 Brassica napus HOM05D003839 ORTHO05D003352 1.7e-41 173.3 166 53.6
BcaB04g18348 Brassica carinata HOM05D003839 ORTHO05D003352 1.2e-39 167.2 182 48.4
A05p17610 Brassica napus HOM05D003839 ORTHO05D003352 1.6e-39 166.8 161 55.3
BraA01t03014Z Brassica rapa HOM05D003839 ORTHO05D003352 3.5e-39 165.6 161 54.7
C09p23320 Brassica napus HOM05D003839 ORTHO05D003352 4.6e-39 165.2 134 60.4
BcaB06g26196 Brassica carinata HOM05D003839 ORTHO05D003352 1.3e-38 163.7 182 47.8
C03p63070 Brassica napus HOM05D003839 ORTHO05D003352 2.3e-38 162.9 134 60.4
BcaB02g06777 Brassica carinata HOM05D003839 ORTHO05D003352 1.1e-37 160.6 182 47.3
BcaB06g26804 Brassica carinata HOM05D003839 ORTHO05D003352 3.3e-37 159.1 147 54.4
BcaB01g01663 Brassica carinata HOM05D003839 ORTHO05D003352 7.3e-37 157.9 182 45.1
BcaB04g17572 Brassica carinata HOM05D003839 ORTHO05D003352 4.7e-36 155.2 134 60.4
BcaB05g23505 Brassica carinata HOM05D003839 ORTHO05D003352 1.4e-35 153.7 181 45.3
BcaB05g23784 Brassica carinata HOM05D003839 ORTHO05D003352 4.0e-35 152.1 81 86.4
BcaC03g17189 Brassica carinata HOM05D003839 ORTHO05D003352 3.4e-34 149.1 147 51.7
BcaB01g00514 Brassica carinata HOM05D003839 ORTHO05D003352 2.2e-33 146.4 134 53.0
C09p49180 Brassica napus HOM05D003839 ORTHO05D003352 1.4e-32 143.7 143 51.0
BcaB05g23319 Brassica carinata HOM05D003839 ORTHO05D003352 1.9e-29 133.3 66 90.9
BcaC03g17190 Brassica carinata HOM05D003839 ORTHO05D003352 3.3e-29 132.5 125 54.4
BcaB01g00779 Brassica carinata HOM05D003839 ORTHO05D003352 3.6e-28 129.0 66 86.4
BraA08t34532Z Brassica rapa HOM05D003839 ORTHO05D003352 3.6e-28 129.0 167 39.5
BcaB01g00717 Brassica carinata HOM05D003839 ORTHO05D003352 4.7e-28 128.6 64 96.9
BcaB02g07569 Brassica carinata HOM05D003839 ORTHO05D003352 1.5e-26 123.6 134 44.8
A04p07260 Brassica napus HOM05D003839 ORTHO05D003352 4.9e-25 118.6 118 54.2
BraA04t16421Z Brassica rapa HOM05D003839 ORTHO05D003352 4.9e-25 118.6 118 54.2
C02p24590 Brassica napus HOM05D003839 ORTHO05D003352 1.9e-24 116.7 142 42.3
BcaC03g15389 Brassica carinata HOM05D003839 ORTHO05D003352 5.4e-24 115.2 181 35.4
BolC7t43565H Brassica oleracea HOM05D003839 ORTHO05D003352 7.1e-24 114.8 181 35.4
BcaC03g16634 Brassica carinata HOM05D003839 ORTHO05D003352 3.5e-23 112.5 181 35.4
A09p32650 Brassica napus HOM05D003839 ORTHO05D003352 6.0e-23 111.7 118 50.8
BcaB05g23095 Brassica carinata HOM05D003839 ORTHO05D003352 6.6e-22 108.2 57 94.7
A05p03580 Brassica napus HOM05D003839 ORTHO05D003352 6.6e-22 108.2 167 37.7
BcaB05g23330 Brassica carinata HOM05D003839 ORTHO05D003352 8.7e-22 107.8 120 47.5
A03p67260 Brassica napus HOM05D003839 ORTHO05D003352 5.6e-21 105.1 92 57.6
BcaC02g10611 Brassica carinata HOM05D003839 ORTHO05D003352 1.6e-20 103.6 131 44.3
BraA02t07568Z Brassica rapa HOM05D008292 ORTHO05D003352 2.0e-18 96.7 119 42.0
BcaC07g38083 Brassica carinata HOM05D003839 ORTHO05D003352 7.6e-18 94.7 84 59.5
A05p20350 Brassica napus HOM05D003839 ORTHO05D003352 1.7e-17 93.6 92 55.4
BolC2t11209H Brassica oleracea HOM05D003839 ORTHO05D003352 6.4e-17 91.7 87 52.9
BcaC01g02162 Brassica carinata HOM05D003839 ORTHO05D003352 8.4e-17 91.3 177 32.8
BolC4t24234H Brassica oleracea HOM05D003839 ORTHO05D003352 1.4e-16 90.5 104 46.2
A09p20270 Brassica napus HOM05D003839 ORTHO05D003352 3.2e-16 89.4 152 32.9
C04p25750 Brassica napus HOM05D003839 ORTHO05D003352 4.2e-16 89.0 104 45.2
C09p21410 Brassica napus HOM05D003839 ORTHO05D003352 7.1e-16 88.2 152 32.9
BraA07t28801Z Brassica rapa HOM05D003839 ORTHO05D003352 9.3e-16 87.8 152 32.9
Thhalv10005434m.g Eutrema salsugineum HOM05D003839 ORTHO05D003352 1.8e-14 83.6 158 29.7
Thhalv10005441m.g Eutrema salsugineum HOM05D003839 ORTHO05D003352 1.8e-14 83.6 164 33.5
A09p19700 Brassica napus HOM05D003839 ORTHO05D003352 5.1e-14 82.0 138 34.1
A03p67960 Brassica napus HOM05D003839 ORTHO05D003352 8.7e-14 81.3 138 34.1
BcaC09g48414 Brassica carinata HOM05D003839 ORTHO05D003352 1.1e-13 80.9 96 42.7
Thhalv10002164m.g Eutrema salsugineum HOM05D003839 ORTHO05D003352 1.1e-13 80.9 153 30.7
Thhalv10002269m.g Eutrema salsugineum HOM05D003839 ORTHO05D003352 1.5e-13 80.5 103 35.0
C02p44490 Brassica napus HOM05D003839 ORTHO05D003352 3.3e-13 79.3 123 34.1
BraA02t07279Z Brassica rapa HOM05D003839 ORTHO05D003352 3.3e-13 79.3 126 35.7
BcaB08g35221 Brassica carinata HOM05D003839 ORTHO05D003352 9.6e-13 77.8 152 25.7
C06p50270 Brassica napus HOM05D003839 ORTHO05D003352 3.6e-12 75.9 115 29.6
C04p33340 Brassica napus HOM05D003839 ORTHO05D003352 4.8e-12 75.5 115 29.6
Thhalv10003316m.g Eutrema salsugineum HOM05D003839 ORTHO05D003352 4.8e-12 75.5 118 33.9
BcaC04g22280 Brassica carinata HOM05D003839 ORTHO05D003352 6.2e-12 75.1 152 32.2
BolC6t35618H Brassica oleracea HOM05D003839 ORTHO05D003352 6.2e-12 75.1 97 39.2
BraA09t40513Z Brassica rapa HOM05D003839 ORTHO05D003352 1.4e-11 73.9 138 30.4
BcaC07g37358 Brassica carinata HOM05D003839 ORTHO05D003352 1.8e-11 73.6 96 40.6
C08p08050 Brassica napus HOM05D003839 ORTHO05D003352 1.8e-11 73.6 96 40.6
BolC8t51019H Brassica oleracea HOM05D003839 ORTHO05D003352 1.8e-11 73.6 124 31.5
BcaC05g27209 Brassica carinata HOM05D003839 ORTHO05D003352 2.4e-11 73.2 58 65.5
C03p67990 Brassica napus HOM05D003839 ORTHO05D003352 2.4e-11 73.2 116 37.9
Thhalv10003388m.g Eutrema salsugineum HOM05D003839 ORTHO05D003352 2.4e-11 73.2 94 37.2
BcaC04g21847 Brassica carinata HOM05D009411 ORTHO05D014997 3.1e-11 72.8 124 33.1
BcaB07g30584 Brassica carinata HOM05D003839 ORTHO05D003352 4.0e-11 72.4 92 41.3
BcaC06g36055 Brassica carinata HOM05D008292 ORTHO05D003352 4.0e-11 72.4 156 26.3
C03p32250 Brassica napus HOM05D008292 ORTHO05D003352 4.0e-11 72.4 156 26.9
C07p34600 Brassica napus HOM05D009411 ORTHO05D014997 4.0e-11 72.4 124 33.1
C09p26700 Brassica napus HOM05D009411 ORTHO05D014997 4.0e-11 72.4 124 33.1
BolC2t10492H Brassica oleracea HOM05D003839 ORTHO05D003352 4.0e-11 72.4 97 38.1
BolC3t20345H Brassica oleracea HOM05D003839 ORTHO05D003352 4.0e-11 72.4 126 33.3
BolC7t43992H Brassica oleracea HOM05D009411 ORTHO05D014997 4.0e-11 72.4 124 33.1
BolC9t55562H Brassica oleracea HOM05D009411 ORTHO05D014997 4.0e-11 72.4 124 33.1
C04p18360 Brassica napus HOM05D003839 ORTHO05D003352 6.9e-11 71.6 92 39.1
C08p34220 Brassica napus HOM05D003839 ORTHO05D003352 6.9e-11 71.6 124 31.5
BcaC06g35172 Brassica carinata HOM05D003839 ORTHO05D003352 1.2e-10 70.9 58 63.8
BcaB02g06630 Brassica carinata HOM05D003839 ORTHO05D003352 3.4e-10 69.3 150 27.3
BcaB04g17896 Brassica carinata HOM05D003839 ORTHO05D003352 3.4e-10 69.3 128 33.6
BcaB06g27469 Brassica carinata HOM05D003839 ORTHO05D003352 3.4e-10 69.3 71 52.1
BcaNung06308 Brassica carinata HOM05D008292 ORTHO05D003352 3.4e-10 69.3 156 26.3
C03p91870 Brassica napus HOM05D003839 ORTHO05D003352 7.6e-10 68.2 94 30.9
BolC3t21507H Brassica oleracea HOM05D003839 ORTHO05D003352 7.6e-10 68.2 94 30.9
C07p08430 Brassica napus HOM05D008292 ORTHO05D003352 9.9e-10 67.8 180 25.6
BolC5t34000H Brassica oleracea HOM05D003839 ORTHO05D003352 9.9e-10 67.8 76 44.7
C01p50050 Brassica napus HOM05D003839 ORTHO05D003352 2.2e-09 66.6 76 44.7
BolC1t03162H Brassica oleracea HOM05D003839 ORTHO05D003352 6.4e-09 65.1 89 38.2
BcaC01g01423 Brassica carinata HOM05D003839 ORTHO05D003352 1.1e-08 64.3 91 30.8
C06p24070 Brassica napus HOM05D018430 ORTHO05D020143 1.1e-08 64.3 118 30.5
BcaB07g31055 Brassica carinata HOM05D003839 ORTHO05D003352 2.4e-08 63.2 71 42.3
BcaB08g35819 Brassica carinata HOM05D003839 ORTHO05D003352 2.4e-08 63.2 64 46.9
A06p31440 Brassica napus HOM05D008292 ORTHO05D003352 2.4e-08 63.2 148 23.6
A09p40840 Brassica napus HOM05D008292 ORTHO05D003352 2.4e-08 63.2 148 23.6
C05p32830 Brassica napus HOM05D003839 ORTHO05D003352 2.4e-08 63.2 62 48.4
BcaC08g44281 Brassica carinata HOM05D003839 ORTHO05D039180 7.1e-08 61.6 96 38.5
A03p53810 Brassica napus HOM05D000357 ORTHO05D000242 7.1e-08 61.6 114 29.8
BolC3t19025H Brassica oleracea HOM05D003839 ORTHO05D003352 7.1e-08 61.6 100 38.0
C03p57520 Brassica napus HOM05D014297 ORTHO05D019911 9.3e-08 61.2 101 29.7
BcaB05g21582 Brassica carinata HOM05D003839 ORTHO05D003352 1.6e-07 60.5 73 42.5
BolC1t05558H Brassica oleracea HOM05D009411 ORTHO05D014997 1.6e-07 60.5 123 30.9
BraA08t34531Z Brassica rapa HOM05D008292 ORTHO05D003352 1.6e-07 60.5 109 27.5
AL8G28420 Arabidopsis lyrata HOM05D003839 ORTHO05D003352 2.1e-07 60.1 152 25.7
BcaB04g18557 Brassica carinata HOM05D003839 ORTHO05D003352 2.7e-07 59.7 73 42.5
BcaC09g47930 Brassica carinata HOM05D008292 ORTHO05D003352 2.7e-07 59.7 150 24.7
A01p36380 Brassica napus HOM05D003839 ORTHO05D003352 2.7e-07 59.7 166 24.1
BcaC01g02980 Brassica carinata HOM05D003839 ORTHO05D003352 4.6e-07 58.9 78 34.6
BcaC07g37399 Brassica carinata HOM05D008292 ORTHO05D003352 4.6e-07 58.9 148 24.3
AL4G17890 Arabidopsis lyrata HOM05D003839 ORTHO05D003352 1.0e-06 57.8 158 25.3
BcaC03g15793 Brassica carinata HOM05D008292 ORTHO05D003352 1.3e-06 57.4 99 26.3
BcaC07g37053 Brassica carinata HOM05D008292 ORTHO05D003352 1.3e-06 57.4 143 24.5
C05p33380 Brassica napus HOM05D000313 ORTHO05D000065 1.3e-06 57.4 166 22.9
BolC3t15567H Brassica oleracea HOM05D008292 ORTHO05D003352 1.3e-06 57.4 123 29.3
BolC5t32063H Brassica oleracea HOM05D000313 ORTHO05D000065 1.3e-06 57.4 166 22.9
BcaC08g44872 Brassica carinata HOM05D003839 ORTHO05D003352 1.8e-06 57.0 79 34.2
A05p32880 Brassica napus HOM05D008292 ORTHO05D003352 1.8e-06 57.0 134 25.4
BraA05t22695Z Brassica rapa HOM05D008292 ORTHO05D003352 1.8e-06 57.0 134 25.4
CARHR101890 Cardamine hirsuta HOM05D008292 ORTHO05D003352 2.3e-06 56.6 102 31.4
BcaC03g17703 Brassica carinata HOM05D008292 ORTHO05D003352 3.0e-06 56.2 109 25.7
BolC2t11778H Brassica oleracea HOM05D008292 ORTHO05D003352 3.0e-06 56.2 109 25.7
BolC4t27064H Brassica oleracea HOM05D008292 ORTHO05D003352 3.0e-06 56.2 134 24.6
BraA01t01719Z Brassica rapa HOM05D003839 ORTHO05D003352 3.9e-06 55.8 75 38.7
BolC8t47715H Brassica oleracea HOM05D008292 ORTHO05D003352 5.1e-06 55.5 79 31.6
A03p53820 Brassica napus HOM05D000943 ORTHO05D002475 6.7e-06 55.1 166 22.3
C02p51180 Brassica napus HOM05D003839 ORTHO05D003352 8.7e-06 54.7 54 53.7
BolC2t12326H Brassica oleracea HOM05D008292 ORTHO05D003352 8.7e-06 54.7 109 25.7


User provided reference genes

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