Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB01g00706 Brassica carinata HOM05D000021 ORTHO05D000010 1.2e-86 323.9 286 100.0
BcaC01g03149 Brassica carinata HOM05D000021 ORTHO05D000010 9.7e-36 154.8 199 73.4
BraA03t13605Z Brassica rapa HOM05D000021 ORTHO05D000010 2.7e-17 93.6 179 58.7
A08p02310 Brassica napus HOM05D000021 ORTHO05D000010 4.2e-15 86.3 166 57.2
C03p55540 Brassica napus HOM05D000021 ORTHO05D000010 2.8e-14 83.6 179 58.1
BolC3t17830H Brassica oleracea HOM05D000021 ORTHO05D000010 2.8e-14 83.6 179 58.1
Thhalv10000757m.g Eutrema salsugineum HOM05D000021 ORTHO05D000010 1.5e-12 77.8 80 56.2
BraA08t32276Z Brassica rapa HOM05D000021 ORTHO05D000010 9.8e-12 75.1 80 53.8
AL5G23250 Arabidopsis lyrata HOM05D000021 ORTHO05D000010 2.8e-11 73.6 79 53.2
BolC3t21369H Brassica oleracea HOM05D000021 ORTHO05D000010 3.7e-11 73.2 79 53.2
BcaB06g26001 Brassica carinata HOM05D000021 ORTHO05D000010 8.3e-11 72.0 80 51.2
Carub.0005s1371 Capsella rubella HOM05D000021 ORTHO05D000010 1.1e-10 71.6 79 50.6
AL5G26360 Arabidopsis lyrata HOM05D000021 ORTHO05D000010 1.4e-10 71.2 80 50.0
Aa31LG4G14470 Aethionema arabicum HOM05D000021 ORTHO05D000010 2.4e-10 70.5 80 48.8
Aa31LG4G14500 Aethionema arabicum HOM05D000021 ORTHO05D000010 2.4e-10 70.5 185 38.9
Thhalv10010091m.g Eutrema salsugineum HOM05D000021 ORTHO05D000010 2.4e-10 70.5 62 58.1
Thhalv10010172m.g Eutrema salsugineum HOM05D000021 ORTHO05D000010 4.1e-10 69.7 171 53.2
AL5G26350 Arabidopsis lyrata HOM05D000021 ORTHO05D000010 7.0e-10 68.9 57 57.9
Aa31LG4G14480 Aethionema arabicum HOM05D000021 ORTHO05D000010 9.2e-10 68.6 80 50.0
Thhalv10011081m.g Eutrema salsugineum HOM05D000021 ORTHO05D000010 1.2e-09 68.2 76 55.3
Carub.0004s1293 Capsella rubella HOM05D000021 ORTHO05D000010 1.6e-09 67.8 41 82.9
Carub.0004s1294 Capsella rubella HOM05D000021 ORTHO05D000010 1.6e-09 67.8 41 82.9
AT3G47090 Arabidopsis thaliana HOM05D000021 ORTHO05D000010 2.0e-09 67.4 80 48.8
Thhalv10002388m.g Eutrema salsugineum HOM05D000021 ORTHO05D000010 2.0e-09 67.4 41 85.4
Aa31LG4G16030 Aethionema arabicum HOM05D000021 ORTHO05D000010 2.7e-09 67.0 80 51.2
A05p30190 Brassica napus HOM05D000021 ORTHO05D000010 2.7e-09 67.0 80 48.8
C07p06010 Brassica napus HOM05D000021 ORTHO05D000010 2.7e-09 67.0 80 48.8
BolC7t41012H Brassica oleracea HOM05D000021 ORTHO05D000010 2.7e-09 67.0 80 48.8
BraA05t21859Z Brassica rapa HOM05D000021 ORTHO05D000010 2.7e-09 67.0 80 48.8
Aa31LG4G14490 Aethionema arabicum HOM05D000021 ORTHO05D000010 5.9e-09 65.9 80 46.2
AL5G26860 Arabidopsis lyrata HOM05D000021 ORTHO05D000010 5.9e-09 65.9 41 82.9
Carub.0219s0002 Capsella rubella HOM05D000021 ORTHO05D000010 5.9e-09 65.9 57 56.1
Thhalv10010090m.g Eutrema salsugineum HOM05D000021 ORTHO05D000010 5.9e-09 65.9 78 47.4
THA.LOC104804940 Tarenaya hassleriana HOM05D000021 ORTHO05D000010 5.9e-09 65.9 80 43.8
Aa31LG4G14530 Aethionema arabicum HOM05D000021 ORTHO05D000010 7.8e-09 65.5 56 58.9
BcaC04g19435 Brassica carinata HOM05D000021 ORTHO05D000010 7.8e-09 65.5 84 44.0
C09p55720 Brassica napus HOM05D000021 ORTHO05D000010 7.8e-09 65.5 84 44.0
BcaC01g01850 Brassica carinata HOM05D000021 ORTHO05D000010 1.0e-08 65.1 200 28.0
A05p16850 Brassica napus HOM05D000021 ORTHO05D000010 1.0e-08 65.1 41 82.9
BraA05t20586Z Brassica rapa HOM05D000021 ORTHO05D000010 1.0e-08 65.1 41 82.9
BcaC02g11588 Brassica carinata HOM05D000021 ORTHO05D000010 1.3e-08 64.7 57 57.9
C03p38060 Brassica napus HOM05D000021 ORTHO05D000010 1.3e-08 64.7 57 56.1
C04p13650 Brassica napus HOM05D000021 ORTHO05D000010 1.3e-08 64.7 57 57.9
C09p27170 Brassica napus HOM05D000021 ORTHO05D000010 1.3e-08 64.7 57 56.1
BolC3t16091H Brassica oleracea HOM05D000021 ORTHO05D000010 1.3e-08 64.7 57 56.1
BolC4t22955H Brassica oleracea HOM05D000021 ORTHO05D000010 1.3e-08 64.7 57 57.9
Sp5g16600 Schrenkiella parvula HOM05D000021 ORTHO05D000010 1.3e-08 64.7 41 80.5
AL5G26340 Arabidopsis lyrata HOM05D000021 ORTHO05D000010 1.7e-08 64.3 41 80.5
AL5G26840 Arabidopsis lyrata HOM05D000021 ORTHO05D000010 1.7e-08 64.3 41 80.5
BolC9t58438H Brassica oleracea HOM05D000021 ORTHO05D000010 1.7e-08 64.3 84 42.9
BraA10t44028Z Brassica rapa HOM05D000021 ORTHO05D000010 1.7e-08 64.3 84 42.9
arahy.Tifrunner.gnm1.ann1.2RH3M5 Arachis hypogaea HOM05D000021 ORTHO05D000010 2.3e-08 63.9 84 44.0
BcaB01g00425 Brassica carinata HOM05D000021 ORTHO05D000010 2.3e-08 63.9 39 82.1
C04p57730 Brassica napus HOM05D000021 ORTHO05D000010 2.3e-08 63.9 41 80.5
ECA238G2109 Erigeron canadensis HOM05D000021 ORTHO05D000010 2.3e-08 63.9 195 26.2
Thhalv10028397m.g Eutrema salsugineum HOM05D000021 ORTHO05D000010 2.3e-08 63.9 41 82.9
AT3G47580 Arabidopsis thaliana HOM05D000021 ORTHO05D000010 2.9e-08 63.5 80 43.8
A09p19100 Brassica napus HOM05D000021 ORTHO05D000010 2.9e-08 63.5 40 80.0
C09p24100 Brassica napus HOM05D000021 ORTHO05D000010 2.9e-08 63.5 40 80.0
BolC9t55326H Brassica oleracea HOM05D000021 ORTHO05D000010 2.9e-08 63.5 40 80.0
BraA04t17726Z Brassica rapa HOM05D000021 ORTHO05D000010 2.9e-08 63.5 41 78.0
BraA09t37529Z Brassica rapa HOM05D000021 ORTHO05D000010 2.9e-08 63.5 40 80.0
Sp5g16390 Schrenkiella parvula HOM05D000021 ORTHO05D000010 2.9e-08 63.5 41 80.5
BcaC04g21816 Brassica carinata HOM05D000021 ORTHO05D000010 3.8e-08 63.2 57 54.4
BcaC09g48434 Brassica carinata HOM05D000021 ORTHO05D000010 3.8e-08 63.2 80 48.8
C01p49820 Brassica napus HOM05D000021 ORTHO05D000010 3.8e-08 63.2 80 48.8
BolC1t04940H Brassica oleracea HOM05D000021 ORTHO05D000010 3.8e-08 63.2 80 48.8
CARHR155700 Cardamine hirsuta HOM05D000021 ORTHO05D000010 3.8e-08 63.2 40 80.0
Sabra10G0176600 Salix brachista HOM05D000021 ORTHO05D000010 3.8e-08 63.2 177 30.5
BcaC05g28477 Brassica carinata HOM05D000021 ORTHO05D000010 5.0e-08 62.8 78 47.4
BraA03t10926Z Brassica rapa HOM05D000021 ORTHO05D000010 5.0e-08 62.8 80 46.2
Thhalv10001203m.g Eutrema salsugineum HOM05D000021 ORTHO05D000010 5.0e-08 62.8 41 80.5
AL5G26330 Arabidopsis lyrata HOM05D000021 ORTHO05D000010 6.6e-08 62.4 41 78.0
BcaB05g24092 Brassica carinata HOM05D000021 ORTHO05D000010 6.6e-08 62.4 80 47.5
BcaC03g16706 Brassica carinata HOM05D000021 ORTHO05D000010 6.6e-08 62.4 75 48.0
BcaC04g22053 Brassica carinata HOM05D000021 ORTHO05D000010 6.6e-08 62.4 40 80.0
BolC2t10568H Brassica oleracea HOM05D000021 ORTHO05D000010 6.6e-08 62.4 75 48.0
Carub.0005s1333 Capsella rubella HOM05D000021 ORTHO05D000010 6.6e-08 62.4 77 45.5
PSO210G6790 Papaver somniferum HOM05D000021 ORTHO05D000010 6.6e-08 62.4 79 46.8
THA.LOC104810718 Tarenaya hassleriana HOM05D000021 ORTHO05D000010 6.6e-08 62.4 80 43.8
A08p21980 Brassica napus HOM05D000021 ORTHO05D000010 8.6e-08 62.0 41 75.6
C04p16900 Brassica napus HOM05D000021 ORTHO05D000010 8.6e-08 62.0 80 48.8
BolC4t23249H Brassica oleracea HOM05D000021 ORTHO05D000010 8.6e-08 62.0 80 48.8
Ciclev10018315m.g Citrus clementina HOM05D000021 ORTHO05D000010 8.6e-08 62.0 200 41.0
Aqoxy7G03073 Aquilegia oxysepala HOM05D000021 ORTHO05D000010 1.1e-07 61.6 79 39.2
AL5G26870 Arabidopsis lyrata HOM05D000021 ORTHO05D000010 1.1e-07 61.6 78 46.2
BcaB01g02427 Brassica carinata HOM05D000021 ORTHO05D000010 1.1e-07 61.6 79 46.8
A10p19520 Brassica napus HOM05D000021 ORTHO05D000010 1.1e-07 61.6 84 40.5
C02p45390 Brassica napus HOM05D000021 ORTHO05D000010 1.1e-07 61.6 75 48.0
BolC7t41013H Brassica oleracea HOM05D000021 ORTHO05D000010 1.1e-07 61.6 39 74.4
Carub.0005s1366 Capsella rubella HOM05D000021 ORTHO05D000010 1.1e-07 61.6 57 56.1
CARHR155740 Cardamine hirsuta HOM05D000021 ORTHO05D000010 1.1e-07 61.6 41 78.0
BcaB01g04585 Brassica carinata HOM05D000021 ORTHO05D000010 1.5e-07 61.2 77 49.4
C08p31870 Brassica napus HOM05D000021 ORTHO05D000010 1.5e-07 61.2 80 43.8
AT5G20480 Arabidopsis thaliana HOM05D000021 ORTHO05D000010 1.9e-07 60.8 80 43.8
MD11G1104000 Malus domestica HOM05D000021 ORTHO05D000010 1.9e-07 60.8 168 29.2
Sp2g09620 Schrenkiella parvula HOM05D000021 ORTHO05D000010 1.9e-07 60.8 80 42.5
AL3G46650 Arabidopsis lyrata HOM05D000021 ORTHO05D000010 2.5e-07 60.5 41 73.2
AL5G26810 Arabidopsis lyrata HOM05D000021 ORTHO05D000010 2.5e-07 60.5 77 46.8
BcaB01g04576 Brassica carinata HOM05D000021 ORTHO05D000010 2.5e-07 60.5 41 78.0
BcaB03g16479 Brassica carinata HOM05D000021 ORTHO05D000010 2.5e-07 60.5 39 71.8
A02p28710 Brassica napus HOM05D000021 ORTHO05D000010 2.5e-07 60.5 75 48.0
Sp5g14630 Schrenkiella parvula HOM05D000021 ORTHO05D000010 2.5e-07 60.5 83 42.2
A06p20420 Brassica napus HOM05D000021 ORTHO05D000010 3.3e-07 60.1 56 53.6
CARHR192340 Cardamine hirsuta HOM05D000021 ORTHO05D000010 3.3e-07 60.1 62 51.6
Thhalv10015316m.g Eutrema salsugineum HOM05D000021 ORTHO05D000010 3.3e-07 60.1 80 42.5
Sp1g34070 Schrenkiella parvula HOM05D000021 ORTHO05D000010 3.3e-07 60.1 78 46.2
Thecc.05G018800 Theobroma cacao HOM05D000021 ORTHO05D000010 3.3e-07 60.1 190 26.3
BcaB01g00489 Brassica carinata HOM05D000021 ORTHO05D000010 4.3e-07 59.7 34 85.3
A03p11730 Brassica napus HOM05D000021 ORTHO05D000010 4.3e-07 59.7 41 78.0
A09p44850 Brassica napus HOM05D000021 ORTHO05D000010 4.3e-07 59.7 34 85.3
BolC3t13820H Brassica oleracea HOM05D000021 ORTHO05D000010 4.3e-07 59.7 76 48.7
BolC8t50308H Brassica oleracea HOM05D000021 ORTHO05D000010 4.3e-07 59.7 34 85.3
BraA09t39947Z Brassica rapa HOM05D000021 ORTHO05D000010 4.3e-07 59.7 34 85.3
Carub.0005s1370 Capsella rubella HOM05D000021 ORTHO05D000010 4.3e-07 59.7 33 87.9
MD11G1101400 Malus domestica HOM05D000021 ORTHO05D000010 4.3e-07 59.7 85 40.0
BcaB08g36503 Brassica carinata HOM05D000021 ORTHO05D000010 5.6e-07 59.3 83 42.2
BcaC01g01801 Brassica carinata HOM05D000021 ORTHO05D000010 5.6e-07 59.3 68 48.5
A04p21620 Brassica napus HOM05D000021 ORTHO05D000010 5.6e-07 59.3 41 73.2
C03p13760 Brassica napus HOM05D000021 ORTHO05D000010 5.6e-07 59.3 76 47.4
C03p71800 Brassica napus HOM05D000021 ORTHO05D000010 5.6e-07 59.3 68 48.5
BolC3t13826H Brassica oleracea HOM05D000021 ORTHO05D000010 5.6e-07 59.3 76 47.4
BolC3t19469H Brassica oleracea HOM05D000021 ORTHO05D000010 5.6e-07 59.3 68 48.5
Thhalv10010088m.g Eutrema salsugineum HOM05D000021 ORTHO05D000010 5.6e-07 59.3 83 42.2
MD11G1106800 Malus domestica HOM05D000021 ORTHO05D000010 5.6e-07 59.3 174 25.9
BcaB04g17168 Brassica carinata HOM05D000021 ORTHO05D000010 7.3e-07 58.9 50 56.0
BcaC06g36251 Brassica carinata HOM05D000021 ORTHO05D000010 7.3e-07 58.9 73 47.9
Carub.0005s1367 Capsella rubella HOM05D000021 ORTHO05D000010 7.3e-07 58.9 34 85.3
Carub.0005s1369 Capsella rubella HOM05D000021 ORTHO05D000010 7.3e-07 58.9 57 50.9
Glyma.03G096600 Glycine max HOM05D000021 ORTHO05D000010 7.3e-07 58.9 57 49.1
AT3G47570 Arabidopsis thaliana HOM05D000021 ORTHO05D000010 9.5e-07 58.5 41 75.6
BolC5t33286H Brassica oleracea HOM05D000021 ORTHO05D000010 9.5e-07 58.5 75 46.7
CiPaw.05G135900 Carya illinoinensis HOM05D000021 ORTHO05D000010 9.5e-07 58.5 194 25.8
Thhalv10012566m.g Eutrema salsugineum HOM05D000021 ORTHO05D000010 9.5e-07 58.5 40 72.5
MD07G1220100 Malus domestica HOM05D000021 ORTHO05D000010 9.5e-07 58.5 85 38.8
BcaC01g06526 Brassica carinata HOM05D000021 ORTHO05D000010 1.2e-06 58.2 41 75.6
A10p08940 Brassica napus HOM05D000021 ORTHO05D000010 1.2e-06 58.2 40 75.0
BraA10t42975Z Brassica rapa HOM05D000021 ORTHO05D000010 1.2e-06 58.2 40 75.0
Ciclev10026982m.g Citrus clementina HOM05D000021 ORTHO05D000010 1.2e-06 58.2 84 35.7
BcaB01g00903 Brassica carinata HOM05D000021 ORTHO05D000010 1.6e-06 57.8 68 47.1
BcaB01g00944 Brassica carinata HOM05D000021 ORTHO05D000010 1.6e-06 57.8 55 52.7
BcaB08g35206 Brassica carinata HOM05D000021 ORTHO05D000010 1.6e-06 57.8 41 75.6
BolC3t19422H Brassica oleracea HOM05D000021 ORTHO05D000010 1.6e-06 57.8 55 52.7
BraA05t20227Z Brassica rapa HOM05D000021 ORTHO05D000010 1.6e-06 57.8 80 43.8
MD03G1090600 Malus domestica HOM05D000021 ORTHO05D000010 1.6e-06 57.8 71 47.9
PSO210G1822 Papaver somniferum HOM05D000021 ORTHO05D000010 1.6e-06 57.8 79 44.3
BcaB01g04588 Brassica carinata HOM05D000021 ORTHO05D000010 2.1e-06 57.4 76 48.7
BcaB06g28225 Brassica carinata HOM05D000021 ORTHO05D000010 2.1e-06 57.4 79 44.3
Carub.0006s1881 Capsella rubella HOM05D000021 ORTHO05D000010 2.1e-06 57.4 55 50.9
FAN06G2787 Fragaria x ananassa HOM05D000021 ORTHO05D000010 2.1e-06 57.4 62 50.0
HanXRQChr06g0165311 Helianthus annuus HOM05D000021 ORTHO05D000010 2.1e-06 57.4 80 42.5
Aa31LG4G16040 Aethionema arabicum HOM05D000021 ORTHO05D000010 2.8e-06 57.0 56 51.8
BcaB01g04580 Brassica carinata HOM05D000021 ORTHO05D000010 2.8e-06 57.0 39 74.4
C03p13770 Brassica napus HOM05D000021 ORTHO05D000010 2.8e-06 57.0 80 43.8
Thhalv10017653m.g Eutrema salsugineum HOM05D000021 ORTHO05D000010 2.8e-06 57.0 41 70.7
MD11G1095000 Malus domestica HOM05D000021 ORTHO05D000010 2.8e-06 57.0 80 42.5
Thecc.10G021700 Theobroma cacao HOM05D000021 ORTHO05D000010 2.8e-06 57.0 56 48.2
AL8G24400 Arabidopsis lyrata HOM05D000021 ORTHO05D000010 3.6e-06 56.6 79 39.2
A06p20020 Brassica napus HOM05D000021 ORTHO05D000010 3.6e-06 56.6 67 47.8
BraA06t25088Z Brassica rapa HOM05D000021 ORTHO05D000010 3.6e-06 56.6 67 47.8
MELO3C009177.2 Cucumis melo HOM05D000021 ORTHO05D000010 3.6e-06 56.6 79 41.8
Os11g0172150 Oryza sativa ssp. japonica HOM05D000021 ORTHO05D000010 3.6e-06 56.6 80 41.2
Phvul.002G123500 Phaseolus vulgaris HOM05D000021 ORTHO05D000010 3.6e-06 56.6 84 38.1
arahy.Tifrunner.gnm1.ann1.SJ4UK8 Arachis hypogaea HOM05D000021 ORTHO05D000010 4.7e-06 56.2 83 41.0
BcaB06g27908 Brassica carinata HOM05D000021 ORTHO05D000010 4.7e-06 56.2 57 52.6
Carub.0005s1372 Capsella rubella HOM05D000021 ORTHO05D000010 4.7e-06 56.2 78 44.9
CARHR192330 Cardamine hirsuta HOM05D000021 ORTHO05D000010 4.7e-06 56.2 78 42.3
Ca_25055_v3 Cicer arietinum L. HOM05D000021 ORTHO05D000010 4.7e-06 56.2 84 39.3
CsaV3_3G033910 Cucumis sativus L. HOM05D000021 ORTHO05D000010 4.7e-06 56.2 79 40.5
Duzib168G0715 Durio zibethinus HOM05D000021 ORTHO05D000010 4.7e-06 56.2 175 37.1
MD00G1043900 Malus domestica HOM05D000021 ORTHO05D000010 4.7e-06 56.2 82 36.6
MD11G1103100 Malus domestica HOM05D000021 ORTHO05D000010 4.7e-06 56.2 85 37.6
MD15G1439200 Malus domestica HOM05D000021 ORTHO05D000010 4.7e-06 56.2 85 37.6
AL4G21250 Arabidopsis lyrata HOM05D000021 ORTHO05D000010 6.1e-06 55.8 41 70.7
AL5G26820 Arabidopsis lyrata HOM05D000021 ORTHO05D000010 6.1e-06 55.8 70 45.7
BcaB01g04575 Brassica carinata HOM05D000021 ORTHO05D000010 6.1e-06 55.8 73 45.2
BolC9t55598H Brassica oleracea HOM05D000021 ORTHO05D000010 6.1e-06 55.8 41 70.7
CARHR155750 Cardamine hirsuta HOM05D000021 ORTHO05D000010 6.1e-06 55.8 52 51.9
MD11G1103600 Malus domestica HOM05D000021 ORTHO05D000010 6.1e-06 55.8 85 38.8
Manes.04G110563 Manihot esculenta HOM05D000021 ORTHO05D000010 6.1e-06 55.8 83 34.9
Manes.04G110590 Manihot esculenta HOM05D000021 ORTHO05D000010 6.1e-06 55.8 83 34.9
THA.LOC104809220 Tarenaya hassleriana HOM05D000021 ORTHO05D000010 6.1e-06 55.8 37 70.3
Aa31LG4G14420 Aethionema arabicum HOM05D000021 ORTHO05D000010 8.0e-06 55.5 50 58.0
BcaB01g04787 Brassica carinata HOM05D000021 ORTHO05D000010 8.0e-06 55.5 57 50.9
Lj4g0028000 Lotus japonicus HOM05D000021 ORTHO05D000010 8.0e-06 55.5 78 39.7
MD00G1013800 Malus domestica HOM05D000021 ORTHO05D000010 8.0e-06 55.5 85 37.6
MD00G1062800 Malus domestica HOM05D000021 ORTHO05D000010 8.0e-06 55.5 57 45.6
MD07G1219700 Malus domestica HOM05D000021 ORTHO05D000010 8.0e-06 55.5 57 45.6
THA.LOC104814909 Tarenaya hassleriana HOM05D000021 ORTHO05D000010 8.0e-06 55.5 57 49.1


User provided reference genes

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