Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB01g00644 Brassica carinata HOM05D010352 ORTHO05D039704 7.7e-79 297.0 140 100.0
A07p06650 Brassica napus HOM05D010352 ORTHO05D039704 4.6e-55 218.0 140 72.9
AL5G44650 Arabidopsis lyrata HOM05D001456 ORTHO05D012062 5.6e-29 131.3 133 48.9
Carub.0005s2878 Capsella rubella HOM05D001456 ORTHO05D012062 5.8e-26 121.3 130 46.9
BcaC02g10275 Brassica carinata HOM05D001456 ORTHO05D012062 4.9e-25 118.2 134 43.3
C04p30870 Brassica napus HOM05D001456 ORTHO05D012062 4.9e-25 118.2 134 43.3
BolC4t24609H Brassica oleracea HOM05D001456 ORTHO05D012062 6.4e-25 117.9 136 43.4
AT3G62050 Arabidopsis thaliana HOM05D001456 ORTHO05D012062 1.4e-24 116.7 123 48.0
BcaNung02251 Brassica carinata HOM05D001456 ORTHO05D012062 5.6e-21 104.8 136 41.2
BcaC02g08726 Brassica carinata HOM05D001456 ORTHO05D031976 3.7e-20 102.1 130 42.3
C04p51270 Brassica napus HOM05D001456 ORTHO05D031976 3.7e-20 102.1 130 42.3
BolC4t26717H Brassica oleracea HOM05D001456 ORTHO05D031976 3.7e-20 102.1 130 42.3
CARHR150720 Cardamine hirsuta HOM05D001456 ORTHO05D012062 3.1e-19 99.0 133 40.6
BraA09t40823Z Brassica rapa HOM05D010352 ORTHO05D012062 1.0e-14 84.0 127 37.0
BcaC07g42627 Brassica carinata HOM05D010352 ORTHO05D012062 1.8e-14 83.2 123 38.2
A09p54100 Brassica napus HOM05D010352 ORTHO05D012062 1.9e-13 79.7 117 38.5
C08p36990 Brassica napus HOM05D010352 ORTHO05D012062 2.4e-11 72.8 132 35.6
A09p54110 Brassica napus HOM05D010352 ORTHO05D012062 4.1e-11 72.0 131 34.4
A02p33060 Brassica napus HOM05D010352 ORTHO05D012062 9.0e-11 70.9 130 32.3
C02p50830 Brassica napus HOM05D010352 ORTHO05D012062 9.0e-11 70.9 130 32.3
BcaC03g17159 Brassica carinata HOM05D010352 ORTHO05D012062 1.2e-10 70.5 136 35.3
BraA02t08327Z Brassica rapa HOM05D010352 ORTHO05D012062 2.0e-10 69.7 133 32.3
CARHR150710 Cardamine hirsuta HOM05D010352 ORTHO05D012062 2.0e-10 69.7 133 34.6
BolC2t11165H Brassica oleracea HOM05D010352 ORTHO05D012062 2.9e-09 65.9 108 37.0
BraA09t40691Z Brassica rapa HOM05D001456 ORTHO05D011781 1.4e-08 63.5 122 27.9
A09p52620 Brassica napus HOM05D001456 ORTHO05D011781 2.5e-08 62.8 114 28.1
AT3G62210 Arabidopsis thaliana HOM05D001456 ORTHO05D002799 7.2e-08 61.2 132 30.3
Solyc02g088870.1 Solanum lycopersicum HOM05D001456 ORTHO05D002799 7.2e-08 61.2 132 30.3
BcaC04g23460 Brassica carinata HOM05D001456 ORTHO05D002799 3.6e-07 58.9 132 28.8
Solyc02g088860.2 Solanum lycopersicum HOM05D001456 ORTHO05D002799 4.6e-07 58.5 132 29.5
Zm00001eb328720 Zea mays HOM05D001456 ORTHO05D002799 4.6e-07 58.5 109 30.3
Sopen02g033570 Solanum pennellii HOM05D001456 ORTHO05D002799 7.9e-07 57.8 132 29.5
CARHR172550 Cardamine hirsuta HOM05D001456 ORTHO05D002799 1.0e-06 57.4 114 28.9
BcaC07g42628 Brassica carinata HOM05D010352 ORTHO05D012062 1.3e-06 57.0 96 36.5
Carub.0008s2185 Capsella rubella HOM05D001456 ORTHO05D002799 1.3e-06 57.0 132 28.0
VMungo0720G0252 Vigna mungo HOM05D001456 ORTHO05D002799 1.3e-06 57.0 132 28.0
AT3G62200 Arabidopsis thaliana HOM05D001456 ORTHO05D002799 1.8e-06 56.6 142 25.4
BcaC08g46204 Brassica carinata HOM05D001456 ORTHO05D009465 1.8e-06 56.6 132 29.5
GSVIVG01028213001 Vitis vinifera HOM05D001456 ORTHO05D002799 2.3e-06 56.2 141 28.4
BolC6t39204H Brassica oleracea HOM05D001456 ORTHO05D002799 3.9e-06 55.5 132 28.8
PGSC0003DMG400001458 Solanum tuberosum HOM05D001456 ORTHO05D002799 6.7e-06 54.7 132 29.5
C06p42210 Brassica napus HOM05D001456 ORTHO05D002799 8.7e-06 54.3 120 30.0


User provided reference genes

Program Settings