Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB01g00427 Brassica carinata HOM05D007193 ORTHO05D008972 2.3e-44 181.8 87 100.0
Sp5g10570 Schrenkiella parvula HOM05D007193 ORTHO05D008972 3.6e-18 94.7 94 58.5
BcaC06g33003 Brassica carinata HOM05D007193 ORTHO05D008972 4.7e-18 94.4 94 57.4
A03p48460 Brassica napus HOM05D007193 ORTHO05D008972 6.2e-18 94.0 94 57.4
BraA03t13951Z Brassica rapa HOM05D007193 ORTHO05D008972 6.2e-18 94.0 94 57.4
AL5G32160 Arabidopsis lyrata HOM05D007193 ORTHO05D008972 8.9e-17 90.1 95 54.7
Thhalv10010348m.g Eutrema salsugineum HOM05D007193 ORTHO05D008972 1.5e-16 89.4 94 55.3
BcaC06g33345 Brassica carinata HOM05D007193 ORTHO05D008972 2.6e-16 88.6 94 54.3
C07p46550 Brassica napus HOM05D007193 ORTHO05D008972 7.6e-16 87.0 94 53.2
AT3G51710 Arabidopsis thaliana HOM05D007193 ORTHO05D008972 2.2e-15 85.5 95 52.6
Carub.0005s1805 Capsella rubella HOM05D007193 ORTHO05D008972 2.9e-15 85.1 96 54.2
CARHR161320 Cardamine hirsuta HOM05D007193 ORTHO05D008972 2.9e-15 85.1 95 52.6
Aa31sc223G10 Aethionema arabicum HOM05D007193 ORTHO05D008972 1.2e-13 79.7 93 52.7
THA.LOC104806626 Tarenaya hassleriana HOM05D007193 ORTHO05D008972 3.6e-10 68.2 92 44.6
Sabra04G0150400 Salix brachista HOM05D007193 ORTHO05D008972 3.1e-09 65.1 57 57.9
FvH4_6g10470 Fragaria vesca HOM05D007193 ORTHO05D008972 6.9e-09 63.9 56 58.9
FAN02G2621 Fragaria x ananassa HOM05D007193 ORTHO05D008972 6.9e-09 63.9 56 58.9
FAN05G1003 Fragaria x ananassa HOM05D007193 ORTHO05D008972 6.9e-09 63.9 56 58.9
FAN14G4175 Fragaria x ananassa HOM05D007193 ORTHO05D008972 6.9e-09 63.9 56 58.9
RcHm_v2.0_Chr3g0461371 Rosa chinensis HOM05D007193 ORTHO05D008972 6.9e-09 63.9 56 57.1
MD04G1170300 Malus domestica HOM05D007193 ORTHO05D008972 1.5e-08 62.8 57 56.1
Cfa017069 Carpinus fangiana HOM05D007193 ORTHO05D008972 2.6e-08 62.0 57 52.6
Haze_21127 Corylus avellana HOM05D007193 ORTHO05D008972 2.6e-08 62.0 57 52.6
FAN09G4509 Fragaria x ananassa HOM05D007193 ORTHO05D008972 4.4e-08 61.2 56 57.1
TPR.G30994 Trifolium pratense HOM05D007193 ORTHO05D008972 4.4e-08 61.2 55 54.5
Medtr7g072460 Medicago truncatula HOM05D007193 ORTHO05D008972 7.6e-08 60.5 55 54.5
Lj1g0001931 Lotus japonicus HOM05D007193 ORTHO05D008972 9.9e-08 60.1 55 54.5
Prupe.6G289100 Prunus persica HOM05D007193 ORTHO05D008972 9.9e-08 60.1 57 50.9
Ca_07743_v3 Cicer arietinum L. HOM05D007193 ORTHO05D008972 1.3e-07 59.7 57 52.6
MELO3C009116.2 Cucumis melo HOM05D007193 ORTHO05D008972 1.3e-07 59.7 90 37.8
Gohir.D02G005700 Gossypium hirsutum HOM05D007193 ORTHO05D008972 1.3e-07 59.7 65 46.2
Gorai.005G006400 Gossypium raimondii HOM05D007193 ORTHO05D008972 1.3e-07 59.7 65 46.2
Glyma.09G278200 Glycine max HOM05D007193 ORTHO05D008972 1.7e-07 59.3 57 49.1
Glyma.18G210600 Glycine max HOM05D007193 ORTHO05D008972 1.7e-07 59.3 57 49.1
Phvul.008G087300 Phaseolus vulgaris HOM05D007193 ORTHO05D008972 1.7e-07 59.3 57 49.1
Prupe.4G286300 Prunus persica HOM05D007193 ORTHO05D008972 1.7e-07 59.3 57 50.9
VMungo1383G2109 Vigna mungo HOM05D007193 ORTHO05D008972 1.7e-07 59.3 57 49.1
Lalb_Chr01g0023631 Lupinus albus HOM05D007193 ORTHO05D008972 2.2e-07 58.9 57 49.1
THA.LOC104806964 Tarenaya hassleriana HOM05D007193 ORTHO05D008972 2.9e-07 58.5 56 51.8
Atru.chr8.2367 Acer truncatum HOM05D007193 ORTHO05D008972 3.8e-07 58.2 57 49.1
Psat3g122120 Pisum sativum HOM05D007193 ORTHO05D008972 3.8e-07 58.2 53 54.7
Hma1.2p1_0174F.1_g077020 Hydrangea macrophylla HOM05D007193 ORTHO05D008972 4.9e-07 57.8 92 39.1
MD12G1184300 Malus domestica HOM05D007193 ORTHO05D008972 4.9e-07 57.8 55 52.7
AUR62006334 Chenopodium quinoa HOM05D007193 ORTHO05D008972 8.4e-07 57.0 58 51.7
ClCG10G022600 Citrullus lanatus HOM05D007193 ORTHO05D008972 8.4e-07 57.0 90 36.7
COL.COLO4_36102 Corchorus olitorius HOM05D007193 ORTHO05D008972 1.1e-06 56.6 57 47.4
Duzib151G0002 Durio zibethinus HOM05D007193 ORTHO05D008972 1.1e-06 56.6 57 47.4
Potri.016G132500 Populus trichocarpa HOM05D007193 ORTHO05D008972 1.1e-06 56.6 57 49.1
Cc02_g36290 Coffea canephora HOM05D007193 ORTHO05D008972 1.4e-06 56.2 57 45.6
Duzib212G0445 Durio zibethinus HOM05D007193 ORTHO05D008972 1.4e-06 56.2 57 45.6
Hund03753 Selenicereus undatus HOM05D007193 ORTHO05D008972 1.4e-06 56.2 89 39.3
EL10Ac7g17043 Beta vulgaris HOM05D007193 ORTHO05D008972 1.9e-06 55.8 57 50.9
arahy.Tifrunner.gnm1.ann1.Y4LGN2 Arachis hypogaea HOM05D007193 ORTHO05D008972 2.4e-06 55.5 57 47.4
Cpa.g.sc33.101 Carica papaya HOM05D007193 ORTHO05D008972 2.4e-06 55.5 57 49.1
Ciclev10011631m.g Citrus clementina HOM05D007193 ORTHO05D008972 2.4e-06 55.5 57 49.1
CsaV3_3G033230 Cucumis sativus L. HOM05D007193 ORTHO05D008972 2.4e-06 55.5 57 47.4
Oeu057644.3 Olea europaea HOM05D007193 ORTHO05D008972 2.4e-06 55.5 57 49.1
Dinv11397 Davidia involucrata HOM05D007193 ORTHO05D008972 4.2e-06 54.7 57 47.4
QL07p033223 Quercus lobata HOM05D007193 ORTHO05D008972 4.2e-06 54.7 57 47.4
arahy.Tifrunner.gnm1.ann1.N3F1SH Arachis hypogaea HOM05D007193 ORTHO05D008972 5.4e-06 54.3 57 45.6
Sed0019502 Sechium edule HOM05D007193 ORTHO05D008972 5.4e-06 54.3 90 33.3
TWI53G1230 Tripterygium wilfordii HOM05D007193 ORTHO05D008972 7.1e-06 53.9 57 43.9
TAR633G0507 Trochodendron aralioides HOM05D007193 ORTHO05D008972 7.1e-06 53.9 57 45.6


User provided reference genes

Program Settings