Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB01g00036 Brassica carinata HOM05D003737 ORTHO05D095156 2.4e-84 315.5 158 100.0
CARHR208270 Cardamine hirsuta HOM05D003737 ORTHO05D004640 6.8e-15 84.7 78 65.4
Sp6g37810 Schrenkiella parvula HOM05D003737 ORTHO05D004640 4.4e-14 82.0 78 61.5
Thhalv10013430m.g Eutrema salsugineum HOM05D003737 ORTHO05D004640 5.8e-14 81.6 78 64.1
BcaC06g32214 Brassica carinata HOM05D003737 ORTHO05D004640 2.2e-13 79.7 78 62.8
C09p71760 Brassica napus HOM05D003737 ORTHO05D004081 2.2e-13 79.7 78 62.8
BolC9t59927H Brassica oleracea HOM05D003737 ORTHO05D004081 2.2e-13 79.7 78 62.8
A10p31150 Brassica napus HOM05D003737 ORTHO05D004081 1.7e-10 70.1 78 57.7
BraA10t45159Z Brassica rapa HOM05D003737 ORTHO05D004081 1.7e-10 70.1 78 57.7
BcaC06g32213 Brassica carinata HOM05D003737 ORTHO05D004640 1.9e-09 66.6 78 55.1
Carub.0003s0996 Capsella rubella HOM05D003737 ORTHO05D004640 3.6e-08 62.4 78 50.0
CARHR085310 Cardamine hirsuta HOM05D003737 ORTHO05D004640 4.7e-08 62.0 78 51.3
Aa31LG11G5690 Aethionema arabicum HOM05D003737 ORTHO05D004640 8.1e-08 61.2 78 47.4
Thhalv10020697m.g Eutrema salsugineum HOM05D003737 ORTHO05D004640 1.4e-07 60.5 78 48.7
AT3G10730 Arabidopsis thaliana HOM05D003737 ORTHO05D004640 3.1e-07 59.3 78 47.4
Aa31LG3G3660 Aethionema arabicum HOM05D003737 ORTHO05D004640 5.2e-07 58.5 78 48.7
AL3G22200 Arabidopsis lyrata HOM05D003737 ORTHO05D004640 6.8e-07 58.2 78 47.4
AL532U10020 Arabidopsis lyrata HOM05D003737 ORTHO05D004640 8.9e-07 57.8 78 47.4
AL6G14700 Arabidopsis lyrata HOM05D003737 ORTHO05D004640 7.6e-06 54.7 78 47.4


User provided reference genes

Program Settings